RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 FEM1AQ9BSK4 669 aa13.8□□□□□ -0.2
COL1A1-209ENST00000495677 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.8□□□□□ -0.2
COL1A1-209ENST00000495677 SLC12A6Q9UHW9 1150 aa13.8□□□□□ -0.2
COL1A1-209ENST00000495677 CFAP45Q9UL16 551 aa13.8□□□□□ -0.2
COL1A1-209ENST00000495677 ZFR2Q9UPR6 939 aaKnown RBP13.8□□□□□ -0.2
COL1A1-209ENST00000495677 FARP1Q9Y4F1 1045 aaPredicted RBP13.8□□□□□ -0.2
COL1A1-209ENST00000495677 OR51B4Q9Y5P0 310 aa13.8□□□□□ -0.2
COL1A1-209ENST00000495677 CHD5Q8TDI0 1954 aa13.8□□□□□ -0.2
COL1A1-209ENST00000495677 SPTY2D1-AS1A0A0U1RR47 76 aa13.79□□□□□ -0.2
COL1A1-209ENST00000495677 PIK3R2O00459 728 aa13.79□□□□□ -0.2
COL1A1-209ENST00000495677 CETN3O15182 167 aa13.79□□□□□ -0.2
COL1A1-209ENST00000495677 MOCS2O96007 188 aaPredicted RBP13.79□□□□□ -0.2
COL1A1-209ENST00000495677 EPB41P11171 864 aaKnown RBP13.79□□□□□ -0.2
COL1A1-209ENST00000495677 NME1P15531 152 aaKnown RBP13.79□□□□□ -0.2
COL1A1-209ENST00000495677 PRLRP16471 622 aa13.79□□□□□ -0.2
COL1A1-209ENST00000495677 CMA1P23946 247 aa13.79□□□□□ -0.2
COL1A1-209ENST00000495677 ACADSBP45954 432 aa13.79□□□□□ -0.2
COL1A1-209ENST00000495677 MTA1Q13330 715 aa13.79□□□□□ -0.2
COL1A1-209ENST00000495677 FZD2Q14332 565 aa13.79□□□□□ -0.2
COL1A1-209ENST00000495677 TMEM259Q4ZIN3 620 aa13.79□□□□□ -0.2
COL1A1-209ENST00000495677 ZC3H12AQ5D1E8 599 aaKnown RBP13.79□□□□□ -0.2
COL1A1-209ENST00000495677 TMEM270Q6UE05 265 aa13.79□□□□□ -0.2
COL1A1-209ENST00000495677 TAC4Q86UU9 113 aa13.79□□□□□ -0.2
COL1A1-209ENST00000495677 ZSCAN30Q86W11 494 aa13.79□□□□□ -0.2
COL1A1-209ENST00000495677 KLK6Q92876 244 aa13.79□□□□□ -0.2
COL1A1-209ENST00000495677 ZSWIM1Q9BR11 485 aa13.79□□□□□ -0.2
COL1A1-209ENST00000495677 DNAJC28Q9NX36 388 aa13.79□□□□□ -0.2
COL1A1-209ENST00000495677 MAPK8IP1Q9UQF2 711 aa13.79□□□□□ -0.2
COL1A1-209ENST00000495677 HPSEQ9Y251 543 aa13.79□□□□□ -0.2
COL1A1-209ENST00000495677 HS3ST2Q9Y278 367 aa13.79□□□□□ -0.2
COL1A1-209ENST00000495677 PCDHGA7Q9Y5G6 932 aa13.79□□□□□ -0.2
COL1A1-209ENST00000495677 TLN1Q9Y490 2541 aaKnown RBP13.79□□□□□ -0.2
COL1A1-209ENST00000495677 CCDC187A0A096LP49 1063 aa13.78□□□□□ -0.2
COL1A1-209ENST00000495677 H3BM21 787 aa13.78□□□□□ -0.2
COL1A1-209ENST00000495677 RNF225M0QZC1 329 aaPredicted RBP13.78□□□□□ -0.2
COL1A1-209ENST00000495677 PMM2O15305 246 aa13.78□□□□□ -0.2
COL1A1-209ENST00000495677 NEBLO76041 1014 aa13.78□□□□□ -0.2
COL1A1-209ENST00000495677 TRUB2O95900 331 aaKnown RBP13.78□□□□□ -0.2
COL1A1-209ENST00000495677 AFPP02771 609 aaKnown RBP13.78□□□□□ -0.2
COL1A1-209ENST00000495677 CTSLP07711 333 aa13.78□□□□□ -0.2
COL1A1-209ENST00000495677 PRR29P0C7W0 189 aa13.78□□□□□ -0.2
COL1A1-209ENST00000495677 SLC2A3P11169 496 aa13.78□□□□□ -0.2
COL1A1-209ENST00000495677 CHRNA3P32297 505 aa13.78□□□□□ -0.2
COL1A1-209ENST00000495677 GPD2P43304 727 aa13.78□□□□□ -0.2
COL1A1-209ENST00000495677 CLDN2P57739 230 aa13.78□□□□□ -0.2
COL1A1-209ENST00000495677 DPYDQ12882 1025 aa13.78□□□□□ -0.2
COL1A1-209ENST00000495677 CDKN3Q16667 212 aa13.78□□□□□ -0.2
COL1A1-209ENST00000495677 ZSCAN23Q3MJ62 389 aa13.78□□□□□ -0.2
COL1A1-209ENST00000495677 RABGAP1LQ5R372 815 aa13.78□□□□□ -0.2
COL1A1-209ENST00000495677 GUSBP11Q6P575 273 aa13.78□□□□□ -0.2
COL1A1-209ENST00000495677 KYAT3Q6YP21 454 aaKnown RBP13.78□□□□□ -0.2
COL1A1-209ENST00000495677 ZNF574Q6ZN55 896 aaPredicted RBP13.78□□□□□ -0.2
COL1A1-209ENST00000495677 Q6ZVU0 165 aa13.78□□□□□ -0.2
COL1A1-209ENST00000495677 ZNF548Q8NEK5 533 aaPredicted RBP13.78□□□□□ -0.2
COL1A1-209ENST00000495677 STK32AQ8WU08 396 aa13.78□□□□□ -0.2
COL1A1-209ENST00000495677 FAM149B1Q96BN6 582 aa13.78□□□□□ -0.2
COL1A1-209ENST00000495677 LIN37Q96GY3 246 aaPredicted RBP13.78□□□□□ -0.2
COL1A1-209ENST00000495677 LENG8Q96PV6 779 aaPredicted RBP13.78□□□□□ -0.2
COL1A1-209ENST00000495677 BOCQ9BWV1 1114 aa13.78□□□□□ -0.2
COL1A1-209ENST00000495677 HDAC8Q9BY41 377 aa13.78□□□□□ -0.2
COL1A1-209ENST00000495677 MIS12Q9H081 205 aa13.78□□□□□ -0.2
COL1A1-209ENST00000495677 POPDC2Q9HBU9 364 aa13.78□□□□□ -0.2
COL1A1-209ENST00000495677 FZD3Q9NPG1 666 aa13.78□□□□□ -0.2
COL1A1-209ENST00000495677 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.78□□□□□ -0.2
COL1A1-209ENST00000495677 CPED1A4D0V7 1026 aa13.77□□□□□ -0.21
COL1A1-209ENST00000495677 POM121BA6NF01 834 aa13.77□□□□□ -0.21
COL1A1-209ENST00000495677 M0QYV0 167 aa13.77□□□□□ -0.21
COL1A1-209ENST00000495677 AQP9O43315 295 aa13.77□□□□□ -0.21
COL1A1-209ENST00000495677 TNFSF15O95150 251 aa13.77□□□□□ -0.21
COL1A1-209ENST00000495677 GJB6O95452 261 aa13.77□□□□□ -0.21
COL1A1-209ENST00000495677 PRNPP04156 253 aa13.77□□□□□ -0.21
COL1A1-209ENST00000495677 RABIFP47224 123 aa13.77□□□□□ -0.21
COL1A1-209ENST00000495677 EIF3IQ13347 325 aaKnown RBP13.77□□□□□ -0.21
COL1A1-209ENST00000495677 MEA1Q16626 185 aa13.77□□□□□ -0.21
COL1A1-209ENST00000495677 C5orf22Q49AR2 442 aa13.77□□□□□ -0.21
COL1A1-209ENST00000495677 ZNF542PQ5EBM4 170 aa13.77□□□□□ -0.21
COL1A1-209ENST00000495677 FBXL22Q6P050 247 aa13.77□□□□□ -0.21
COL1A1-209ENST00000495677 ERN2Q76MJ5 926 aaKnown RBP13.77□□□□□ -0.21
COL1A1-209ENST00000495677 EFL1Q7Z2Z2 1120 aaKnown RBP13.77□□□□□ -0.21
COL1A1-209ENST00000495677 PARGQ86W56 976 aa13.77□□□□□ -0.21
COL1A1-209ENST00000495677 OR52K2Q8NGK3 314 aa13.77□□□□□ -0.21
COL1A1-209ENST00000495677 OR2A12Q8NGT7 310 aa13.77□□□□□ -0.21
COL1A1-209ENST00000495677 BTN2A2Q8WVV5 523 aa13.77□□□□□ -0.21
COL1A1-209ENST00000495677 GLMNQ92990 594 aa13.77□□□□□ -0.21
COL1A1-209ENST00000495677 NAT6Q93015 286 aa13.77□□□□□ -0.21
COL1A1-209ENST00000495677 RNF34Q969K3 372 aa13.77□□□□□ -0.21
COL1A1-209ENST00000495677 ARRDC3Q96B67 414 aa13.77□□□□□ -0.21
COL1A1-209ENST00000495677 SGF29Q96ES7 293 aa13.77□□□□□ -0.21
COL1A1-209ENST00000495677 TBATAQ96M53 351 aa13.77□□□□□ -0.21
COL1A1-209ENST00000495677 CCDC114Q96M63 670 aa13.77□□□□□ -0.21
COL1A1-209ENST00000495677 MYOCQ99972 504 aa13.77□□□□□ -0.21
COL1A1-209ENST00000495677 SLC17A9Q9BYT1 436 aa13.77□□□□□ -0.21
COL1A1-209ENST00000495677 CAAP1Q9H8G2 361 aa13.77□□□□□ -0.21
COL1A1-209ENST00000495677 TBC1D30Q9Y2I9 924 aa13.77□□□□□ -0.21
COL1A1-209ENST00000495677 LRRK1Q38SD2 2015 aa13.76□□□□□ -0.21
COL1A1-209ENST00000495677 FAM237AA0A1B0GTK4 181 aa13.76□□□□□ -0.21
COL1A1-209ENST00000495677 A0A1B0GVL5 298 aa13.76□□□□□ -0.21
COL1A1-209ENST00000495677 NTN3O00634 580 aaPredicted RBP13.76□□□□□ -0.21
COL1A1-209ENST00000495677 NOBOXO60393 691 aa13.76□□□□□ -0.21
COL1A1-209ENST00000495677 PCDH8O95206 1070 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms