RNA–Protein interactions for RNA: ENST00000495561.1

SRRM1-219, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-219ENST00000495561 PRG4Q92954 1404 aaPredicted RBP4.4□□□□□ -1.7
SRRM1-219ENST00000495561 BIVM-ERCC5R4GMW8 1640 aa4.4□□□□□ -1.7
SRRM1-219ENST00000495561 TBC1D3DA0A087WVF3 549 aa4.4□□□□□ -1.71
SRRM1-219ENST00000495561 TBC1D3IA0A087WXS9 549 aa4.4□□□□□ -1.71
SRRM1-219ENST00000495561 TBC1D3EA0A087X179 549 aa4.4□□□□□ -1.71
SRRM1-219ENST00000495561 TBC1D3KA0A087X1G2 549 aa4.4□□□□□ -1.71
SRRM1-219ENST00000495561 LINC01553A4QN01 128 aa4.4□□□□□ -1.71
SRRM1-219ENST00000495561 TBC1D3BA6NDS4 549 aa4.4□□□□□ -1.71
SRRM1-219ENST00000495561 TBC1D3FA6NER0 549 aaPredicted RBP4.4□□□□□ -1.71
SRRM1-219ENST00000495561 TBC1D3LB9A6J9 549 aa4.4□□□□□ -1.71
SRRM1-219ENST00000495561 BMPR1BO00238 502 aa4.4□□□□□ -1.71
SRRM1-219ENST00000495561 TBC1D3HP0C7X1 549 aa4.4□□□□□ -1.71
SRRM1-219ENST00000495561 UNGP13051 313 aaPredicted RBP4.4□□□□□ -1.71
SRRM1-219ENST00000495561 NAGAP17050 411 aa4.4□□□□□ -1.71
SRRM1-219ENST00000495561 ATF3P18847 181 aa4.4□□□□□ -1.71
SRRM1-219ENST00000495561 KLRK1P26718 216 aa4.4□□□□□ -1.71
SRRM1-219ENST00000495561 RBM6P78332 1123 aaKnown RBP4.4□□□□□ -1.71
SRRM1-219ENST00000495561 ILF3Q12906 894 aaKnown RBP eCLIP4.4□□□□□ -1.71
SRRM1-219ENST00000495561 VWA5B1Q5TIE3 1220 aa4.4□□□□□ -1.71
SRRM1-219ENST00000495561 ARL6IP4Q66PJ3 421 aaKnown RBP4.4□□□□□ -1.71
SRRM1-219ENST00000495561 TBC1D3GQ6DHY5 549 aa4.4□□□□□ -1.71
SRRM1-219ENST00000495561 TBC1D3CQ6IPX1 549 aa4.4□□□□□ -1.71
SRRM1-219ENST00000495561 DGKHQ86XP1 1220 aa4.4□□□□□ -1.71
SRRM1-219ENST00000495561 TBC1D3Q8IZP1 549 aaPredicted RBP4.4□□□□□ -1.71
SRRM1-219ENST00000495561 LILRB1Q8NHL6 650 aaPredicted RBP4.4□□□□□ -1.71
SRRM1-219ENST00000495561 CEP76Q8TAP6 659 aa4.4□□□□□ -1.71
SRRM1-219ENST00000495561 WDR60Q8WVS4 1066 aa4.4□□□□□ -1.71
SRRM1-219ENST00000495561 TMEM120AQ9BXJ8 343 aa4.4□□□□□ -1.71
SRRM1-219ENST00000495561 DONSONQ9NYP3 566 aa4.4□□□□□ -1.71
SRRM1-219ENST00000495561 ADAMTS12P58397 1594 aa4.4□□□□□ -1.71
SRRM1-219ENST00000495561 IGLV5-52A0A0A0MRZ9 124 aa4.39□□□□□ -1.71
SRRM1-219ENST00000495561 KIF28PB7ZC32 967 aa4.39□□□□□ -1.71
SRRM1-219ENST00000495561 NCK2O43639 380 aa4.39□□□□□ -1.71
SRRM1-219ENST00000495561 MYZAPP0CAP1 466 aa4.39□□□□□ -1.71
SRRM1-219ENST00000495561 EEF1GP26641 437 aaKnown RBP4.39□□□□□ -1.71
SRRM1-219ENST00000495561 CYP2J2P51589 502 aa4.39□□□□□ -1.71
SRRM1-219ENST00000495561 DSTYKQ6XUX3 929 aa4.39□□□□□ -1.71
SRRM1-219ENST00000495561 SLC35F5Q8WV83 523 aa4.39□□□□□ -1.71
SRRM1-219ENST00000495561 ZNF333Q96JL9 665 aa4.39□□□□□ -1.71
SRRM1-219ENST00000495561 MECRQ9BV79 373 aa4.39□□□□□ -1.71
SRRM1-219ENST00000495561 KRTAP4-4Q9BYR3 166 aa4.39□□□□□ -1.71
SRRM1-219ENST00000495561 IGSF9Q9P2J2 1179 aa4.39□□□□□ -1.71
SRRM1-219ENST00000495561 NFU1Q9UMS0 254 aa4.39□□□□□ -1.71
SRRM1-219ENST00000495561 ERICH3Q5RHP9 1530 aa4.38□□□□□ -1.71
SRRM1-219ENST00000495561 FGF18O76093 207 aa4.38□□□□□ -1.71
SRRM1-219ENST00000495561 DAOP14920 347 aa4.38□□□□□ -1.71
SRRM1-219ENST00000495561 IFIT5Q13325 482 aaKnown RBP4.38□□□□□ -1.71
SRRM1-219ENST00000495561 RBM39Q14498 530 aaKnown RBP4.38□□□□□ -1.71
SRRM1-219ENST00000495561 RAB30Q15771 203 aa4.38□□□□□ -1.71
SRRM1-219ENST00000495561 FAM171A1Q5VUB5 890 aa4.38□□□□□ -1.71
SRRM1-219ENST00000495561 HIST2H2BCQ6DN03 193 aa4.38□□□□□ -1.71
SRRM1-219ENST00000495561 KRTAP5-4Q6L8H1 288 aa4.38□□□□□ -1.71
SRRM1-219ENST00000495561 RINT1Q6NUQ1 792 aa4.38□□□□□ -1.71
SRRM1-219ENST00000495561 ZNF449Q6P9G9 518 aa4.38□□□□□ -1.71
SRRM1-219ENST00000495561 MIGA1Q8NAN2 632 aa4.38□□□□□ -1.71
SRRM1-219ENST00000495561 BRI3BPQ8WY22 251 aa4.38□□□□□ -1.71
SRRM1-219ENST00000495561 WBP2Q969T9 261 aa4.38□□□□□ -1.71
SRRM1-219ENST00000495561 ZNF566Q969W8 418 aa4.38□□□□□ -1.71
SRRM1-219ENST00000495561 Q9N2J8 555 aa4.38□□□□□ -1.71
SRRM1-219ENST00000495561 SRPRBQ9Y5M8 271 aaKnown RBP4.38□□□□□ -1.71
SRRM1-219ENST00000495561 KIF27Q86VH2 1401 aa4.38□□□□□ -1.71
SRRM1-219ENST00000495561 IGHV4-28A0A0C4DH34 117 aa4.37□□□□□ -1.71
SRRM1-219ENST00000495561 TMCC1O94876 653 aa4.37□□□□□ -1.71
SRRM1-219ENST00000495561 AKT1P31749 480 aa4.37□□□□□ -1.71
SRRM1-219ENST00000495561 ALDH18A1P54886 795 aaKnown RBP4.37□□□□□ -1.71
SRRM1-219ENST00000495561 CDH12P55289 794 aa4.37□□□□□ -1.71
SRRM1-219ENST00000495561 FAM209BQ5JX69 171 aa4.37□□□□□ -1.71
SRRM1-219ENST00000495561 ZNF569Q5MCW4 686 aa4.37□□□□□ -1.71
SRRM1-219ENST00000495561 ZNF771Q7L3S4 317 aaPredicted RBP4.37□□□□□ -1.71
SRRM1-219ENST00000495561 PALB2Q86YC2 1186 aa4.37□□□□□ -1.71
SRRM1-219ENST00000495561 TMEM163Q8TC26 289 aa4.37□□□□□ -1.71
SRRM1-219ENST00000495561 SLC25A33Q9BSK2 321 aa4.37□□□□□ -1.71
SRRM1-219ENST00000495561 GAREM1Q9H706 876 aa4.37□□□□□ -1.71
SRRM1-219ENST00000495561 AGO1Q9UL18 857 aaKnown RBP4.37□□□□□ -1.71
SRRM1-219ENST00000495561 FAM50BQ9Y247 325 aa4.37□□□□□ -1.71
SRRM1-219ENST00000495561 CARMIL1Q5VZK9 1371 aa4.37□□□□□ -1.71
SRRM1-219ENST00000495561 RUSC2Q8N2Y8 1516 aa4.36□□□□□ -1.71
SRRM1-219ENST00000495561 SLC38A8A6NNN8 435 aa4.36□□□□□ -1.71
SRRM1-219ENST00000495561 HNRNPDLO14979 420 aaKnown RBP4.36□□□□□ -1.71
SRRM1-219ENST00000495561 SERPINI2O75830 405 aa4.36□□□□□ -1.71
SRRM1-219ENST00000495561 NPPBP16860 134 aa4.36□□□□□ -1.71
SRRM1-219ENST00000495561 HOXB9P17482 250 aaPredicted RBP4.36□□□□□ -1.71
SRRM1-219ENST00000495561 TNFSF4P23510 183 aa4.36□□□□□ -1.71
SRRM1-219ENST00000495561 RNASELQ05823 741 aaKnown RBP4.36□□□□□ -1.71
SRRM1-219ENST00000495561 ACSM2AQ08AH3 577 aa4.36□□□□□ -1.71
SRRM1-219ENST00000495561 SF3A3Q12874 501 aaKnown RBP eCLIP4.36□□□□□ -1.712e-21■■■■□ 21.4
SRRM1-219ENST00000495561 C5orf22Q49AR2 442 aa4.36□□□□□ -1.71
SRRM1-219ENST00000495561 RETSATQ6NUM9 610 aa4.36□□□□□ -1.71
SRRM1-219ENST00000495561 ENDOVQ8N8Q3 282 aaKnown RBP4.36□□□□□ -1.71
SRRM1-219ENST00000495561 IPO4Q8TEX9 1081 aaKnown RBP4.36□□□□□ -1.71
SRRM1-219ENST00000495561 ADGRG7Q96K78 797 aa4.36□□□□□ -1.71
SRRM1-219ENST00000495561 GFM1Q96RP9 751 aaKnown RBP4.36□□□□□ -1.71
SRRM1-219ENST00000495561 TM7SF3Q9NS93 570 aa4.36□□□□□ -1.71
SRRM1-219ENST00000495561 MBD3L5A6NJ08 208 aaPredicted RBP4.35□□□□□ -1.71
SRRM1-219ENST00000495561 HSPB6O14558 160 aa4.35□□□□□ -1.71
SRRM1-219ENST00000495561 CLDN7O95471 211 aa4.35□□□□□ -1.71
SRRM1-219ENST00000495561 PRPH2P23942 346 aa4.35□□□□□ -1.71
SRRM1-219ENST00000495561 C21orf33P30042 268 aaPredicted RBP4.35□□□□□ -1.71
SRRM1-219ENST00000495561 SF3B4Q15427 424 aaKnown RBP eCLIP4.35□□□□□ -1.712e-6■■■■□ 24.7
SRRM1-219ENST00000495561 KRT71Q3SY84 523 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms