RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 CBLBQ13191 982 aa10.59□□□□□ -0.71
SAMM50-206ENST00000494795 PTPRRQ15256 657 aa10.59□□□□□ -0.71
SAMM50-206ENST00000494795 ZNF789Q5FWF6 425 aa10.59□□□□□ -0.71
SAMM50-206ENST00000494795 C10orf120Q5SQS8 335 aa10.59□□□□□ -0.71
SAMM50-206ENST00000494795 TEDDM1Q5T9Z0 273 aa10.59□□□□□ -0.71
SAMM50-206ENST00000494795 LDB1Q86U70 411 aaPredicted RBP10.59□□□□□ -0.71
SAMM50-206ENST00000494795 TMEM135Q86UB9 458 aa10.59□□□□□ -0.71
SAMM50-206ENST00000494795 RNF135Q8IUD6 432 aa10.59□□□□□ -0.71
SAMM50-206ENST00000494795 EIF2B3Q9NR50 452 aaKnown RBP10.59□□□□□ -0.71
SAMM50-206ENST00000494795 A0A0D9SEW6 157 aa10.58□□□□□ -0.72
SAMM50-206ENST00000494795 MUSKO15146 869 aa10.58□□□□□ -0.72
SAMM50-206ENST00000494795 ALDH2P05091 517 aa10.58□□□□□ -0.72
SAMM50-206ENST00000494795 MLNP12872 115 aa10.58□□□□□ -0.72
SAMM50-206ENST00000494795 SGSHP51688 502 aa10.58□□□□□ -0.72
SAMM50-206ENST00000494795 TBX4P57082 545 aa10.58□□□□□ -0.72
SAMM50-206ENST00000494795 MAPRE1Q15691 268 aaKnown RBP10.58□□□□□ -0.72
SAMM50-206ENST00000494795 RNF43Q68DV7 783 aa10.58□□□□□ -0.72
SAMM50-206ENST00000494795 PGBD5Q8N414 524 aa10.58□□□□□ -0.72
SAMM50-206ENST00000494795 FBXO22Q8NEZ5 403 aa10.58□□□□□ -0.72
SAMM50-206ENST00000494795 FBXO27Q8NI29 283 aa10.58□□□□□ -0.72
SAMM50-206ENST00000494795 PABPC5Q96DU9 382 aaKnown RBP10.58□□□□□ -0.72
SAMM50-206ENST00000494795 GKN1Q9NS71 199 aa10.58□□□□□ -0.72
SAMM50-206ENST00000494795 C20orf96Q9NUD7 363 aaPredicted RBP10.58□□□□□ -0.72
SAMM50-206ENST00000494795 PHF24Q9UPV7 400 aa10.58□□□□□ -0.72
SAMM50-206ENST00000494795 SCML2Q9UQR0 700 aa10.58□□□□□ -0.72
SAMM50-206ENST00000494795 PCDHB5Q9Y5E4 795 aa10.58□□□□□ -0.72
SAMM50-206ENST00000494795 PRRC2BQ5JSZ5 2229 aaKnown RBP10.58□□□□□ -0.72
SAMM50-206ENST00000494795 SLC12A8A0AV02 714 aa10.58□□□□□ -0.72
SAMM50-206ENST00000494795 PHGDHO43175 533 aaKnown RBP10.58□□□□□ -0.72
SAMM50-206ENST00000494795 KRT38O76015 456 aa10.58□□□□□ -0.72
SAMM50-206ENST00000494795 POLBP06746 335 aa10.58□□□□□ -0.72
SAMM50-206ENST00000494795 SKIP12755 728 aa10.58□□□□□ -0.72
SAMM50-206ENST00000494795 ALADP13716 330 aa10.58□□□□□ -0.72
SAMM50-206ENST00000494795 GLDCP23378 1020 aa10.58□□□□□ -0.72
SAMM50-206ENST00000494795 ITGB8P26012 769 aa10.58□□□□□ -0.72
SAMM50-206ENST00000494795 AIF1P55008 147 aa10.58□□□□□ -0.72
SAMM50-206ENST00000494795 SARNPP82979 210 aaKnown RBP10.58□□□□□ -0.72
SAMM50-206ENST00000494795 TMPRSS15P98073 1019 aa10.58□□□□□ -0.72
SAMM50-206ENST00000494795 PDE1BQ01064 536 aa10.58□□□□□ -0.72
SAMM50-206ENST00000494795 DSC2Q02487 901 aa10.58□□□□□ -0.72
SAMM50-206ENST00000494795 MARK2Q7KZI7 788 aaKnown RBP10.58□□□□□ -0.72
SAMM50-206ENST00000494795 MON1AQ86VX9 555 aa10.58□□□□□ -0.72
SAMM50-206ENST00000494795 ZNF354CQ86Y25 554 aa10.58□□□□□ -0.72
SAMM50-206ENST00000494795 ARID3BQ8IVW6 561 aaPredicted RBP10.58□□□□□ -0.72
SAMM50-206ENST00000494795 AGR3Q8TD06 166 aa10.58□□□□□ -0.72
SAMM50-206ENST00000494795 TBC1D31Q96DN5 1066 aa10.58□□□□□ -0.72
SAMM50-206ENST00000494795 HAPLN3Q96S86 360 aa10.58□□□□□ -0.72
SAMM50-206ENST00000494795 TMEM120AQ9BXJ8 343 aa10.58□□□□□ -0.72
SAMM50-206ENST00000494795 FRMD8Q9BZ67 464 aaPredicted RBP10.58□□□□□ -0.72
SAMM50-206ENST00000494795 IQCGQ9H095 443 aaKnown RBP10.58□□□□□ -0.72
SAMM50-206ENST00000494795 PPCSQ9HAB8 311 aa10.58□□□□□ -0.72
SAMM50-206ENST00000494795 KLC4Q9NSK0 619 aa10.58□□□□□ -0.72
SAMM50-206ENST00000494795 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.58□□□□□ -0.72
SAMM50-206ENST00000494795 CPSF2Q9P2I0 782 aaKnown RBP10.58□□□□□ -0.72
SAMM50-206ENST00000494795 HEY2Q9UBP5 337 aa10.58□□□□□ -0.72
SAMM50-206ENST00000494795 KCTD3Q9Y597 815 aa10.58□□□□□ -0.72
SAMM50-206ENST00000494795 SEC24AO95486 1093 aa10.58□□□□□ -0.72
SAMM50-206ENST00000494795 PIRTP0C851 137 aa10.58□□□□□ -0.72
SAMM50-206ENST00000494795 MYL2P10916 166 aa10.58□□□□□ -0.72
SAMM50-206ENST00000494795 FGFR3P22607 806 aa10.58□□□□□ -0.72
SAMM50-206ENST00000494795 SLC6A4P31645 630 aa10.58□□□□□ -0.72
SAMM50-206ENST00000494795 CPA2P48052 419 aa10.58□□□□□ -0.72
SAMM50-206ENST00000494795 ERFP50548 548 aa10.58□□□□□ -0.72
SAMM50-206ENST00000494795 CTC1Q2NKJ3 1217 aa10.58□□□□□ -0.72
SAMM50-206ENST00000494795 C10orf107Q8IVU9 208 aa10.58□□□□□ -0.72
SAMM50-206ENST00000494795 RTL3Q8N8U3 475 aaKnown RBP10.58□□□□□ -0.72
SAMM50-206ENST00000494795 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.58□□□□□ -0.72
SAMM50-206ENST00000494795 SHKBP1Q8TBC3 707 aa10.58□□□□□ -0.72
SAMM50-206ENST00000494795 MRGPRX2Q96LB1 330 aa10.58□□□□□ -0.72
SAMM50-206ENST00000494795 NT5MQ9NPB1 228 aa10.58□□□□□ -0.72
SAMM50-206ENST00000494795 SNX15Q9NRS6 342 aa10.58□□□□□ -0.72
SAMM50-206ENST00000494795 IPO11Q9UI26 975 aaKnown RBP10.58□□□□□ -0.72
SAMM50-206ENST00000494795 SQORQ9Y6N5 450 aa10.58□□□□□ -0.72
SAMM50-206ENST00000494795 USP34Q70CQ2 3546 aa10.57□□□□□ -0.72
SAMM50-206ENST00000494795 GREB1Q4ZG55 1949 aa10.57□□□□□ -0.72
SAMM50-206ENST00000494795 NRG2O14511 850 aaPredicted RBP10.57□□□□□ -0.72
SAMM50-206ENST00000494795 VAPBO95292 243 aa10.57□□□□□ -0.72
SAMM50-206ENST00000494795 SPATA31D3P0C874 917 aa10.57□□□□□ -0.72
SAMM50-206ENST00000494795 YWHAQP27348 245 aa10.57□□□□□ -0.72
SAMM50-206ENST00000494795 ALDH3A1P30838 453 aa10.57□□□□□ -0.72
SAMM50-206ENST00000494795 OR1D2P34982 312 aa10.57□□□□□ -0.72
SAMM50-206ENST00000494795 GLRBP48167 497 aa10.57□□□□□ -0.72
SAMM50-206ENST00000494795 CDK16Q00536 496 aa10.57□□□□□ -0.72
SAMM50-206ENST00000494795 VWA5B1Q5TIE3 1220 aa10.57□□□□□ -0.72
SAMM50-206ENST00000494795 NAPRTQ6XQN6 538 aa10.57□□□□□ -0.72
SAMM50-206ENST00000494795 SPATA31D4Q6ZUB0 917 aa10.57□□□□□ -0.72
SAMM50-206ENST00000494795 KCNMB4Q86W47 210 aa10.57□□□□□ -0.72
SAMM50-206ENST00000494795 NUDCD3Q8IVD9 361 aa10.57□□□□□ -0.72
SAMM50-206ENST00000494795 SLC7A6OSQ96CW6 309 aaPredicted RBP10.57□□□□□ -0.72
SAMM50-206ENST00000494795 LRRC37BQ96QE4 947 aa10.57□□□□□ -0.72
SAMM50-206ENST00000494795 CYP2S1Q96SQ9 504 aa10.57□□□□□ -0.72
SAMM50-206ENST00000494795 GLOD4Q9HC38 313 aa10.57□□□□□ -0.72
SAMM50-206ENST00000494795 ARL8BQ9NVJ2 186 aa10.57□□□□□ -0.72
SAMM50-206ENST00000494795 RRN3Q9NYV6 651 aa10.57□□□□□ -0.72
SAMM50-206ENST00000494795 BFARQ9NZS9 450 aa10.57□□□□□ -0.72
SAMM50-206ENST00000494795 LRFN2Q9ULH4 789 aa10.57□□□□□ -0.72
SAMM50-206ENST00000494795 OR51F1A6NGY5 319 aa10.57□□□□□ -0.72
SAMM50-206ENST00000494795 TMEM189-UBE2V1I3L0A0 370 aa10.57□□□□□ -0.72
SAMM50-206ENST00000494795 DNAJC8O75937 253 aaPredicted RBP10.57□□□□□ -0.72
SAMM50-206ENST00000494795 MX2P20592 715 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms