RNA–Protein interactions for RNA: ENST00000494486.1

TRIM59-206, Transcript of tripartite motif containing 59, humanhuman

TSL 3

Gene TRIM59, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-206ENST00000494486 PHF19Q5T6S3 580 aa11.26□□□□□ -0.61
TRIM59-206ENST00000494486 L1TD1Q5T7N2 865 aaKnown RBP11.26□□□□□ -0.61
TRIM59-206ENST00000494486 CEP135Q66GS9 1140 aa11.26□□□□□ -0.61
TRIM59-206ENST00000494486 LVRNQ6Q4G3 990 aa11.26□□□□□ -0.61
TRIM59-206ENST00000494486 CCNJLQ8IV13 435 aa11.26□□□□□ -0.61
TRIM59-206ENST00000494486 SLITRK4Q8IW52 837 aa11.26□□□□□ -0.61
TRIM59-206ENST00000494486 CCDC117Q8IWD4 279 aaPredicted RBP11.26□□□□□ -0.61
TRIM59-206ENST00000494486 SYAP1Q96A49 352 aaPredicted RBP11.26□□□□□ -0.61
TRIM59-206ENST00000494486 CBWD1Q9BRT8 395 aa11.26□□□□□ -0.61
TRIM59-206ENST00000494486 PCIF1Q9H4Z3 704 aa11.26□□□□□ -0.61
TRIM59-206ENST00000494486 HBS1LQ9Y450 684 aaKnown RBP11.26□□□□□ -0.61
TRIM59-206ENST00000494486 PCDHB13Q9Y5F0 798 aa11.26□□□□□ -0.61
TRIM59-206ENST00000494486 SCN8AQ9UQD0 1980 aa11.26□□□□□ -0.61
TRIM59-206ENST00000494486 SLC26A4O43511 780 aa11.25□□□□□ -0.61
TRIM59-206ENST00000494486 MAP4P27816 1152 aaKnown RBP11.25□□□□□ -0.61
TRIM59-206ENST00000494486 ADORA2BP29275 332 aa11.25□□□□□ -0.61
TRIM59-206ENST00000494486 TRPC3Q13507 836 aa11.25□□□□□ -0.61
TRIM59-206ENST00000494486 C16orf72Q14CZ0 275 aa11.25□□□□□ -0.61
TRIM59-206ENST00000494486 ZRANB3Q5FWF4 1079 aa11.25□□□□□ -0.61
TRIM59-206ENST00000494486 PIP5KL1Q5T9C9 394 aa11.25□□□□□ -0.61
TRIM59-206ENST00000494486 C16orf46Q6P387 395 aa11.25□□□□□ -0.61
TRIM59-206ENST00000494486 GDF7Q7Z4P5 450 aa11.25□□□□□ -0.61
TRIM59-206ENST00000494486 SYCP3Q8IZU3 236 aa11.25□□□□□ -0.61
TRIM59-206ENST00000494486 RBFAQ8N0V3 343 aa11.25□□□□□ -0.61
TRIM59-206ENST00000494486 KYQ8NBH2 561 aa11.25□□□□□ -0.61
TRIM59-206ENST00000494486 CCDC112Q8NEF3 446 aa11.25□□□□□ -0.61
TRIM59-206ENST00000494486 RPL10LQ96L21 214 aaKnown RBP11.25□□□□□ -0.61
TRIM59-206ENST00000494486 DDA1Q9BW61 102 aa11.25□□□□□ -0.61
TRIM59-206ENST00000494486 ASPSCR1Q9BZE9 553 aa11.25□□□□□ -0.61
TRIM59-206ENST00000494486 SLC13A1Q9BZW2 595 aa11.25□□□□□ -0.61
TRIM59-206ENST00000494486 XYLT2Q9H1B5 865 aa11.25□□□□□ -0.61
TRIM59-206ENST00000494486 SMYD3Q9H7B4 428 aa11.25□□□□□ -0.61
TRIM59-206ENST00000494486 OLA1Q9NTK5 396 aaKnown RBP11.25□□□□□ -0.61
TRIM59-206ENST00000494486 STIM2Q9P246 746 aa11.25□□□□□ -0.61
TRIM59-206ENST00000494486 APPL1Q9UKG1 709 aa11.25□□□□□ -0.61
TRIM59-206ENST00000494486 DOLKQ9UPQ8 538 aa11.25□□□□□ -0.61
TRIM59-206ENST00000494486 ZFR2Q9UPR6 939 aaKnown RBP11.25□□□□□ -0.61
TRIM59-206ENST00000494486 PCSK5Q92824 1860 aa11.25□□□□□ -0.61
TRIM59-206ENST00000494486 CELSR1Q9NYQ6 3014 aa11.25□□□□□ -0.61
TRIM59-206ENST00000494486 M0QYT0 321 aa11.24□□□□□ -0.61
TRIM59-206ENST00000494486 HGSO14964 777 aaPredicted RBP11.24□□□□□ -0.61
TRIM59-206ENST00000494486 ALOX15BO15296 676 aa11.24□□□□□ -0.61
TRIM59-206ENST00000494486 SPINT1O43278 529 aa11.24□□□□□ -0.61
TRIM59-206ENST00000494486 RFPL1O75677 317 aa11.24□□□□□ -0.61
TRIM59-206ENST00000494486 PCDH8O95206 1070 aa11.24□□□□□ -0.61
TRIM59-206ENST00000494486 FGF3P11487 239 aaPredicted RBP11.24□□□□□ -0.61
TRIM59-206ENST00000494486 VAV1P15498 845 aa11.24□□□□□ -0.61
TRIM59-206ENST00000494486 PNLIPP16233 465 aa11.24□□□□□ -0.61
TRIM59-206ENST00000494486 TSHRP16473 764 aa11.24□□□□□ -0.61
TRIM59-206ENST00000494486 ZNF18P17022 549 aa11.24□□□□□ -0.61
TRIM59-206ENST00000494486 TNNI1P19237 187 aa11.24□□□□□ -0.61
TRIM59-206ENST00000494486 TRIM21P19474 475 aaKnown RBP11.24□□□□□ -0.61
TRIM59-206ENST00000494486 PDCP20941 246 aa11.24□□□□□ -0.61
TRIM59-206ENST00000494486 MYL6P60660 151 aa11.24□□□□□ -0.61
TRIM59-206ENST00000494486 GUCY1B3Q02153 619 aa11.24□□□□□ -0.61
TRIM59-206ENST00000494486 RFWD3Q6PCD5 774 aa11.24□□□□□ -0.61
TRIM59-206ENST00000494486 PHACTR4Q8IZ21 702 aa11.24□□□□□ -0.61
TRIM59-206ENST00000494486 C12orf29Q8N999 325 aa11.24□□□□□ -0.61
TRIM59-206ENST00000494486 Q8N9G6 341 aaPredicted RBP11.24□□□□□ -0.61
TRIM59-206ENST00000494486 FRS2Q8WU20 508 aa11.24□□□□□ -0.61
TRIM59-206ENST00000494486 STARD8Q92502 1023 aa11.24□□□□□ -0.61
TRIM59-206ENST00000494486 LRRC61Q9BV99 259 aa11.24□□□□□ -0.61
TRIM59-206ENST00000494486 REPIN1Q9BWE0 567 aaKnown RBP11.24□□□□□ -0.61
TRIM59-206ENST00000494486 SLC17A9Q9BYT1 436 aa11.24□□□□□ -0.61
TRIM59-206ENST00000494486 CLPBQ9H078 707 aa11.24□□□□□ -0.61
TRIM59-206ENST00000494486 TCEAL2Q9H3H9 227 aaPredicted RBP11.24□□□□□ -0.61
TRIM59-206ENST00000494486 VRTNQ9H8Y1 702 aa11.24□□□□□ -0.61
TRIM59-206ENST00000494486 MRPL44Q9H9J2 332 aaKnown RBP11.24□□□□□ -0.61
TRIM59-206ENST00000494486 LATS2Q9NRM7 1088 aa11.24□□□□□ -0.61
TRIM59-206ENST00000494486 FAM49BQ9NUQ9 324 aa11.24□□□□□ -0.61
TRIM59-206ENST00000494486 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.24□□□□□ -0.61
TRIM59-206ENST00000494486 SIRPGQ9P1W8 387 aa11.24□□□□□ -0.61
TRIM59-206ENST00000494486 TLK1Q9UKI8 766 aa11.24□□□□□ -0.61
TRIM59-206ENST00000494486 SDK2Q58EX2 2172 aa11.23□□□□□ -0.61
TRIM59-206ENST00000494486 TYW5A2RUC4 315 aaKnown RBP11.23□□□□□ -0.61
TRIM59-206ENST00000494486 FPGTO14772 594 aa11.23□□□□□ -0.61
TRIM59-206ENST00000494486 MCF2LO15068 1137 aa11.23□□□□□ -0.61
TRIM59-206ENST00000494486 STX6O43752 255 aa11.23□□□□□ -0.61
TRIM59-206ENST00000494486 PDGFAP04085 211 aa11.23□□□□□ -0.61
TRIM59-206ENST00000494486 ITGA3P26006 1051 aa11.23□□□□□ -0.61
TRIM59-206ENST00000494486 PTGER4P35408 488 aa11.23□□□□□ -0.61
TRIM59-206ENST00000494486 YWHAGP61981 247 aaKnown RBP eCLIP11.23□□□□□ -0.61
TRIM59-206ENST00000494486 CDH18Q13634 790 aa11.23□□□□□ -0.61
TRIM59-206ENST00000494486 PTK2BQ14289 1009 aa11.23□□□□□ -0.61
TRIM59-206ENST00000494486 MCM6Q14566 821 aa11.23□□□□□ -0.61
TRIM59-206ENST00000494486 NADK2Q4G0N4 442 aa11.23□□□□□ -0.61
TRIM59-206ENST00000494486 TMEM259Q4ZIN3 620 aa11.23□□□□□ -0.61
TRIM59-206ENST00000494486 FAXCQ5TGI0 409 aa11.23□□□□□ -0.61
TRIM59-206ENST00000494486 UNC93AQ86WB7 457 aa11.23□□□□□ -0.61
TRIM59-206ENST00000494486 SFR1Q86XK3 245 aa11.23□□□□□ -0.61
TRIM59-206ENST00000494486 CBWD2Q8IUF1 395 aa11.23□□□□□ -0.61
TRIM59-206ENST00000494486 NLGN4XQ8N0W4 816 aa11.23□□□□□ -0.61
TRIM59-206ENST00000494486 FSTL5Q8N475 847 aaPredicted RBP11.23□□□□□ -0.61
TRIM59-206ENST00000494486 CARNMT1Q8N4J0 409 aa11.23□□□□□ -0.61
TRIM59-206ENST00000494486 HJURPQ8NCD3 748 aaPredicted RBP11.23□□□□□ -0.61
TRIM59-206ENST00000494486 NLGN4YQ8NFZ3 816 aaPredicted RBP11.23□□□□□ -0.61
TRIM59-206ENST00000494486 SEMA6CQ9H3T2 930 aa11.23□□□□□ -0.61
TRIM59-206ENST00000494486 KIAA1586Q9HCI6 787 aa11.23□□□□□ -0.61
TRIM59-206ENST00000494486 PILRAQ9UKJ1 303 aa11.23□□□□□ -0.61
TRIM59-206ENST00000494486 PCDHB3Q9Y5E6 796 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms