RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 AVL9Q8NBF6 648 aa2.39□□□□□ -2.03
PTPN12-212ENST00000494248 OR6B3Q8NGW1 331 aa2.39□□□□□ -2.03
PTPN12-212ENST00000494248 MAFAQ8NHW3 353 aaPredicted RBP2.39□□□□□ -2.03
PTPN12-212ENST00000494248 GABPB2Q8TAK5 448 aaPredicted RBP2.39□□□□□ -2.03
PTPN12-212ENST00000494248 PPP1R35Q8TAP8 253 aa2.39□□□□□ -2.03
PTPN12-212ENST00000494248 BICD2Q8TD16 824 aa2.39□□□□□ -2.03
PTPN12-212ENST00000494248 BCAS4Q8TDM0 211 aa2.39□□□□□ -2.03
PTPN12-212ENST00000494248 LRTOMTQ8WZ04 291 aa2.39□□□□□ -2.03
PTPN12-212ENST00000494248 RAPGEF4Q8WZA2 1011 aa2.39□□□□□ -2.03
PTPN12-212ENST00000494248 SLC25A28Q96A46 364 aa2.39□□□□□ -2.03
PTPN12-212ENST00000494248 NSUN4Q96CB9 384 aaKnown RBP2.39□□□□□ -2.03
PTPN12-212ENST00000494248 MVB12AQ96EY5 273 aa2.39□□□□□ -2.03
PTPN12-212ENST00000494248 RBM18Q96H35 190 aaKnown RBP2.39□□□□□ -2.03
PTPN12-212ENST00000494248 VPS50Q96JG6 964 aa2.39□□□□□ -2.03
PTPN12-212ENST00000494248 GSDMAQ96QA5 445 aa2.39□□□□□ -2.03
PTPN12-212ENST00000494248 B3GNT5Q9BYG0 378 aa2.39□□□□□ -2.03
PTPN12-212ENST00000494248 MAGEH1Q9H213 219 aa2.39□□□□□ -2.03
PTPN12-212ENST00000494248 GHITMQ9H3K2 345 aa2.39□□□□□ -2.03
PTPN12-212ENST00000494248 PREBQ9HCU5 417 aa2.39□□□□□ -2.03
PTPN12-212ENST00000494248 DECR2Q9NUI1 292 aa2.39□□□□□ -2.03
PTPN12-212ENST00000494248 HAUS2Q9NVX0 235 aa2.39□□□□□ -2.03
PTPN12-212ENST00000494248 GRHPRQ9UBQ7 328 aa2.39□□□□□ -2.03
PTPN12-212ENST00000494248 LPAR3Q9UBY5 353 aa2.39□□□□□ -2.03
PTPN12-212ENST00000494248 TBC1D29Q9UFV1 150 aa2.39□□□□□ -2.03
PTPN12-212ENST00000494248 RASAL2Q9UJF2 1139 aa2.39□□□□□ -2.03
PTPN12-212ENST00000494248 FBXL5Q9UKA1 691 aa2.39□□□□□ -2.03
PTPN12-212ENST00000494248 ZNF711Q9Y462 761 aa2.39□□□□□ -2.03
PTPN12-212ENST00000494248 ZFP37Q9Y6Q3 630 aaPredicted RBP2.39□□□□□ -2.03
PTPN12-212ENST00000494248 RSF1Q96T23 1441 aaPredicted RBP2.39□□□□□ -2.03
PTPN12-212ENST00000494248 FLT1P17948 1338 aa2.39□□□□□ -2.03
PTPN12-212ENST00000494248 PIK3R4Q99570 1358 aa2.38□□□□□ -2.03
PTPN12-212ENST00000494248 ABCC9O60706 1549 aa2.38□□□□□ -2.03
PTPN12-212ENST00000494248 KIF26BQ2KJY2 2108 aa2.38□□□□□ -2.03
PTPN12-212ENST00000494248 LOC105378220A0A1B0GUY1 285 aaPredicted RBP2.38□□□□□ -2.03
PTPN12-212ENST00000494248 PI4KAP2A4QPH2 592 aa2.38□□□□□ -2.03
PTPN12-212ENST00000494248 GOLGA6L3A6NEY3 463 aa2.38□□□□□ -2.03
PTPN12-212ENST00000494248 CAPN8A6NHC0 703 aa2.38□□□□□ -2.03
PTPN12-212ENST00000494248 C2orf81A6NN90 581 aa2.38□□□□□ -2.03
PTPN12-212ENST00000494248 BOLA2-SMG1P6H3BVE0 249 aa2.38□□□□□ -2.03
PTPN12-212ENST00000494248 CASQ2O14958 399 aaPredicted RBP2.38□□□□□ -2.03
PTPN12-212ENST00000494248 LINC01565O15544 149 aa2.38□□□□□ -2.03
PTPN12-212ENST00000494248 PHGDHO43175 533 aaKnown RBP2.38□□□□□ -2.03
PTPN12-212ENST00000494248 SLC7A4O43246 635 aa2.38□□□□□ -2.03
PTPN12-212ENST00000494248 SLC22A3O75751 556 aa2.38□□□□□ -2.03
PTPN12-212ENST00000494248 TMEM63AO94886 807 aa2.38□□□□□ -2.03
PTPN12-212ENST00000494248 UBXN7O94888 489 aa2.38□□□□□ -2.03
PTPN12-212ENST00000494248 RASAL1O95294 804 aa2.38□□□□□ -2.03
PTPN12-212ENST00000494248 NEFHP12036 1026 aa2.38□□□□□ -2.03
PTPN12-212ENST00000494248 MYF5P13349 255 aa2.38□□□□□ -2.03
PTPN12-212ENST00000494248 CHMP24386 653 aa2.38□□□□□ -2.03
PTPN12-212ENST00000494248 IL4RP24394 825 aa2.38□□□□□ -2.03
PTPN12-212ENST00000494248 HOXD10P28358 340 aa2.38□□□□□ -2.03
PTPN12-212ENST00000494248 PDIA3P30101 505 aaKnown RBP2.38□□□□□ -2.03
PTPN12-212ENST00000494248 HOXD13P35453 343 aa2.38□□□□□ -2.03
PTPN12-212ENST00000494248 ACTN2P35609 894 aa2.38□□□□□ -2.03
PTPN12-212ENST00000494248 ALDH7A1P49419 539 aaKnown RBP2.38□□□□□ -2.03
PTPN12-212ENST00000494248 GATMP50440 423 aa2.38□□□□□ -2.03
PTPN12-212ENST00000494248 TUBP50607 506 aa2.38□□□□□ -2.03
PTPN12-212ENST00000494248 AGFG1P52594 562 aaKnown RBP2.38□□□□□ -2.03
PTPN12-212ENST00000494248 PGGT1BP53609 377 aa2.38□□□□□ -2.03
PTPN12-212ENST00000494248 RCAN1P53805 252 aa2.38□□□□□ -2.03
PTPN12-212ENST00000494248 ARF3P61204 181 aaPredicted RBP2.38□□□□□ -2.03
PTPN12-212ENST00000494248 VAMP2P63027 116 aa2.38□□□□□ -2.03
PTPN12-212ENST00000494248 ARF1P84077 181 aaKnown RBP2.38□□□□□ -2.03
PTPN12-212ENST00000494248 EIF4G1Q04637 1599 aaKnown RBP2.38□□□□□ -2.03
PTPN12-212ENST00000494248 DMTNQ08495 405 aa2.38□□□□□ -2.03
PTPN12-212ENST00000494248 ZNF543Q08ER8 600 aa2.38□□□□□ -2.03
PTPN12-212ENST00000494248 GALNT1Q10472 559 aaPredicted RBP2.38□□□□□ -2.03
PTPN12-212ENST00000494248 AP1B1Q10567 949 aa2.38□□□□□ -2.03
PTPN12-212ENST00000494248 CTBP1Q13363 440 aa2.38□□□□□ -2.03
PTPN12-212ENST00000494248 TRPC3Q13507 836 aa2.38□□□□□ -2.03
PTPN12-212ENST00000494248 RAB32Q13637 225 aa2.38□□□□□ -2.03
PTPN12-212ENST00000494248 MFSD13AQ14CX5 517 aa2.38□□□□□ -2.03
PTPN12-212ENST00000494248 RASA2Q15283 850 aa2.38□□□□□ -2.03
PTPN12-212ENST00000494248 CNN3Q15417 329 aaKnown RBP2.38□□□□□ -2.03
PTPN12-212ENST00000494248 PFKFB4Q16877 469 aa2.38□□□□□ -2.03
PTPN12-212ENST00000494248 ANKDD1AQ495B1 522 aa2.38□□□□□ -2.03
PTPN12-212ENST00000494248 MMEL1Q495T6 779 aa2.38□□□□□ -2.03
PTPN12-212ENST00000494248 ANO6Q4KMQ2 910 aa2.38□□□□□ -2.03
PTPN12-212ENST00000494248 TAF3Q5VWG9 929 aa2.38□□□□□ -2.03
PTPN12-212ENST00000494248 BSPRYQ5W0U4 402 aa2.38□□□□□ -2.03
PTPN12-212ENST00000494248 HAUS3Q68CZ6 603 aa2.38□□□□□ -2.03
PTPN12-212ENST00000494248 RPUSD3Q6P087 351 aaKnown RBP2.38□□□□□ -2.03
PTPN12-212ENST00000494248 C11orf88Q6PI97 169 aa2.38□□□□□ -2.03
PTPN12-212ENST00000494248 KDELC1Q6UW63 502 aa2.38□□□□□ -2.03
PTPN12-212ENST00000494248 BEND5Q7L4P6 421 aa2.38□□□□□ -2.03
PTPN12-212ENST00000494248 GALNT7Q86SF2 657 aa2.38□□□□□ -2.03
PTPN12-212ENST00000494248 LURAP1LQ8IV03 231 aa2.38□□□□□ -2.03
PTPN12-212ENST00000494248 TBC1D21Q8IYX1 336 aa2.38□□□□□ -2.03
PTPN12-212ENST00000494248 OR8H3Q8N146 312 aa2.38□□□□□ -2.03
PTPN12-212ENST00000494248 NUP93Q8N1F7 819 aa2.38□□□□□ -2.03
PTPN12-212ENST00000494248 GOT1L1Q8NHS2 421 aaPredicted RBP2.38□□□□□ -2.03
PTPN12-212ENST00000494248 TDRD7Q8NHU6 1098 aaKnown RBP2.38□□□□□ -2.03
PTPN12-212ENST00000494248 FBXO30Q8TB52 745 aa2.38□□□□□ -2.03
PTPN12-212ENST00000494248 UTP15Q8TED0 518 aaKnown RBP2.38□□□□□ -2.03
PTPN12-212ENST00000494248 SMCR8Q8TEV9 937 aaPredicted RBP2.38□□□□□ -2.03
PTPN12-212ENST00000494248 HERVK_113Q902F9 699 aa2.38□□□□□ -2.03
PTPN12-212ENST00000494248 HTRA1Q92743 480 aa2.38□□□□□ -2.03
PTPN12-212ENST00000494248 ARHGEF2Q92974 986 aaKnown RBP2.38□□□□□ -2.03
PTPN12-212ENST00000494248 KIF1BPQ96EK5 621 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms