RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 STARD13Q9Y3M8 1113 aa10.85□□□□□ -0.67
CLCN6-208ENST00000494028 ABHD14A-ACY1A0A1B0GW23 586 aa10.84□□□□□ -0.67
CLCN6-208ENST00000494028 CCT8L1PA6NM43 557 aa10.84□□□□□ -0.67
CLCN6-208ENST00000494028 AP3B1O00203 1094 aa10.84□□□□□ -0.67
CLCN6-208ENST00000494028 C2CD2LO14523 706 aa10.84□□□□□ -0.67
CLCN6-208ENST00000494028 TPP1O14773 563 aa10.84□□□□□ -0.67
CLCN6-208ENST00000494028 ATP9BO43861 1147 aa10.84□□□□□ -0.67
CLCN6-208ENST00000494028 FSBPO95073 299 aa10.84□□□□□ -0.67
CLCN6-208ENST00000494028 GJB5O95377 273 aa10.84□□□□□ -0.67
CLCN6-208ENST00000494028 MT-CYBP00156 380 aaPredicted RBP10.84□□□□□ -0.67
CLCN6-208ENST00000494028 ALDOAP04075 364 aaKnown RBP10.84□□□□□ -0.67
CLCN6-208ENST00000494028 ERVK-10P10266 1014 aa10.84□□□□□ -0.67
CLCN6-208ENST00000494028 DNAJB2P25686 324 aa10.84□□□□□ -0.67
CLCN6-208ENST00000494028 ITGB8P26012 769 aa10.84□□□□□ -0.67
CLCN6-208ENST00000494028 SERPINB4P48594 390 aa10.84□□□□□ -0.67
CLCN6-208ENST00000494028 MAPKAPK2P49137 400 aa10.84□□□□□ -0.67
CLCN6-208ENST00000494028 NPY2RP49146 381 aa10.84□□□□□ -0.67
CLCN6-208ENST00000494028 ALDH7A1P49419 539 aaKnown RBP10.84□□□□□ -0.67
CLCN6-208ENST00000494028 KCNQ1P51787 676 aa10.84□□□□□ -0.67
CLCN6-208ENST00000494028 LIMK2P53671 638 aa10.84□□□□□ -0.67
CLCN6-208ENST00000494028 MTA1Q13330 715 aa10.84□□□□□ -0.67
CLCN6-208ENST00000494028 C5orf22Q49AR2 442 aa10.84□□□□□ -0.67
CLCN6-208ENST00000494028 LACTB2Q53H82 288 aaPredicted RBP10.84□□□□□ -0.67
CLCN6-208ENST00000494028 FAM133BQ5BKY9 247 aaKnown RBP10.84□□□□□ -0.67
CLCN6-208ENST00000494028 ACBD5Q5T8D3 534 aaPredicted RBP10.84□□□□□ -0.67
CLCN6-208ENST00000494028 RNF187Q5TA31 235 aaPredicted RBP10.84□□□□□ -0.67
CLCN6-208ENST00000494028 LGSNQ5TDP6 509 aa10.84□□□□□ -0.67
CLCN6-208ENST00000494028 MROH9Q5TGP6 573 aa10.84□□□□□ -0.67
CLCN6-208ENST00000494028 SNX30Q5VWJ9 437 aa10.84□□□□□ -0.67
CLCN6-208ENST00000494028 CCDC121Q6ZUS5 278 aa10.84□□□□□ -0.67
CLCN6-208ENST00000494028 OTOAQ7RTW8 1153 aa10.84□□□□□ -0.67
CLCN6-208ENST00000494028 LINC00523Q86TU6 105 aa10.84□□□□□ -0.67
CLCN6-208ENST00000494028 CCDC117Q8IWD4 279 aaPredicted RBP10.84□□□□□ -0.67
CLCN6-208ENST00000494028 OTUD6BQ8N6M0 293 aa10.84□□□□□ -0.67
CLCN6-208ENST00000494028 ANKS4BQ8N8V4 417 aa10.84□□□□□ -0.67
CLCN6-208ENST00000494028 ACMSDQ8TDX5 336 aa10.84□□□□□ -0.67
CLCN6-208ENST00000494028 C10orf82Q8WW14 230 aa10.84□□□□□ -0.67
CLCN6-208ENST00000494028 ZNF75CPQ92670 426 aaPredicted RBP10.84□□□□□ -0.67
CLCN6-208ENST00000494028 TOP1MTQ969P6 601 aa10.84□□□□□ -0.67
CLCN6-208ENST00000494028 GRAMD1AQ96CP6 724 aa10.84□□□□□ -0.67
CLCN6-208ENST00000494028 TRMT2BQ96GJ1 504 aaKnown RBP10.84□□□□□ -0.67
CLCN6-208ENST00000494028 RMDN2Q96LZ7 410 aa10.84□□□□□ -0.67
CLCN6-208ENST00000494028 RPRD1AQ96P16 312 aaPredicted RBP10.84□□□□□ -0.67
CLCN6-208ENST00000494028 RBBP8Q99708 897 aa10.84□□□□□ -0.67
CLCN6-208ENST00000494028 C11orf49Q9H6J7 331 aa10.84□□□□□ -0.67
CLCN6-208ENST00000494028 SP110Q9HB58 689 aa10.84□□□□□ -0.67
CLCN6-208ENST00000494028 PDFQ9HBH1 243 aa10.84□□□□□ -0.67
CLCN6-208ENST00000494028 MRM3Q9HC36 420 aaKnown RBP10.84□□□□□ -0.67
CLCN6-208ENST00000494028 RBM22Q9NW64 420 aaKnown RBP eCLIP10.84□□□□□ -0.67
CLCN6-208ENST00000494028 ZFATQ9P243 1243 aa10.84□□□□□ -0.67
CLCN6-208ENST00000494028 HSFX1Q9UBD0 423 aa10.84□□□□□ -0.67
CLCN6-208ENST00000494028 PHTF1Q9UMS5 762 aa10.84□□□□□ -0.67
CLCN6-208ENST00000494028 ARL2BPQ9Y2Y0 163 aa10.84□□□□□ -0.67
CLCN6-208ENST00000494028 AAR2Q9Y312 384 aaKnown RBP10.84□□□□□ -0.67
CLCN6-208ENST00000494028 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.83□□□□□ -0.68
CLCN6-208ENST00000494028 ZNF840PA6NDX5 716 aa10.83□□□□□ -0.68
CLCN6-208ENST00000494028 F5H5T6 163 aa10.83□□□□□ -0.68
CLCN6-208ENST00000494028 J3KR12 359 aa10.83□□□□□ -0.68
CLCN6-208ENST00000494028 COCHO43405 550 aa10.83□□□□□ -0.68
CLCN6-208ENST00000494028 ACSL4O60488 711 aa10.83□□□□□ -0.68
CLCN6-208ENST00000494028 RAMP2O60895 175 aa10.83□□□□□ -0.68
CLCN6-208ENST00000494028 ABLIM3O94929 683 aa10.83□□□□□ -0.68
CLCN6-208ENST00000494028 TOP3BO95985 862 aaKnown RBP10.83□□□□□ -0.68
CLCN6-208ENST00000494028 IL1BP01584 269 aa10.83□□□□□ -0.68
CLCN6-208ENST00000494028 URODP06132 367 aa10.83□□□□□ -0.68
CLCN6-208ENST00000494028 ITGA2BP08514 1039 aa10.83□□□□□ -0.68
CLCN6-208ENST00000494028 F7P08709 466 aaPredicted RBP10.83□□□□□ -0.68
CLCN6-208ENST00000494028 NMBRP28336 390 aa10.83□□□□□ -0.68
CLCN6-208ENST00000494028 HOXD9P28356 352 aaPredicted RBP10.83□□□□□ -0.68
CLCN6-208ENST00000494028 SLC6A4P31645 630 aa10.83□□□□□ -0.68
CLCN6-208ENST00000494028 TUFMP49411 452 aaKnown RBP10.83□□□□□ -0.68
CLCN6-208ENST00000494028 KPNA1P52294 538 aaPredicted RBP10.83□□□□□ -0.68
CLCN6-208ENST00000494028 CSE1LP55060 971 aaKnown RBP10.83□□□□□ -0.68
CLCN6-208ENST00000494028 SEPT7Q16181 437 aaKnown RBP10.83□□□□□ -0.68
CLCN6-208ENST00000494028 PARP15Q460N3 678 aa10.83□□□□□ -0.68
CLCN6-208ENST00000494028 SPOUT1Q5T280 376 aaKnown RBP10.83□□□□□ -0.68
CLCN6-208ENST00000494028 TPGS2Q68CL5 300 aa10.83□□□□□ -0.68
CLCN6-208ENST00000494028 RNF43Q68DV7 783 aa10.83□□□□□ -0.68
CLCN6-208ENST00000494028 FAM117BQ6P1L5 589 aa10.83□□□□□ -0.68
CLCN6-208ENST00000494028 KLHDC10Q6PID8 442 aa10.83□□□□□ -0.68
CLCN6-208ENST00000494028 KCNMB4Q86W47 210 aa10.83□□□□□ -0.68
CLCN6-208ENST00000494028 LGI2Q8N0V4 545 aa10.83□□□□□ -0.68
CLCN6-208ENST00000494028 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.83□□□□□ -0.68
CLCN6-208ENST00000494028 TEX26Q8N6G2 289 aa10.83□□□□□ -0.68
CLCN6-208ENST00000494028 PLD4Q96BZ4 506 aa10.83□□□□□ -0.68
CLCN6-208ENST00000494028 MFSD3Q96ES6 412 aa10.83□□□□□ -0.68
CLCN6-208ENST00000494028 IMP4Q96G21 291 aaKnown RBP10.83□□□□□ -0.68
CLCN6-208ENST00000494028 TMEM169Q96HH4 297 aa10.83□□□□□ -0.68
CLCN6-208ENST00000494028 MRGPRX2Q96LB1 330 aa10.83□□□□□ -0.68
CLCN6-208ENST00000494028 KLHL5Q96PQ7 755 aa10.83□□□□□ -0.68
CLCN6-208ENST00000494028 CPNE1Q99829 537 aa10.83□□□□□ -0.68
CLCN6-208ENST00000494028 MCMBPQ9BTE3 642 aa10.83□□□□□ -0.68
CLCN6-208ENST00000494028 KIFC1Q9BW19 673 aa10.83□□□□□ -0.68
CLCN6-208ENST00000494028 IQCGQ9H095 443 aaKnown RBP10.83□□□□□ -0.68
CLCN6-208ENST00000494028 SLC25A51Q9H1U9 297 aa10.83□□□□□ -0.68
CLCN6-208ENST00000494028 VPS11Q9H270 941 aa10.83□□□□□ -0.68
CLCN6-208ENST00000494028 ACTR5Q9H9F9 607 aaPredicted RBP10.83□□□□□ -0.68
CLCN6-208ENST00000494028 ATP13A1Q9HD20 1204 aa10.83□□□□□ -0.68
CLCN6-208ENST00000494028 NT5MQ9NPB1 228 aa10.83□□□□□ -0.68
CLCN6-208ENST00000494028 PCDH10Q9P2E7 1040 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms