RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 DHRS1Q96LJ7 313 aa14.04□□□□□ -0.16
VCP-207ENST00000493886 FTHL17Q9BXU8 183 aa14.04□□□□□ -0.16
VCP-207ENST00000493886 LRRC40Q9H9A6 602 aa14.04□□□□□ -0.16
VCP-207ENST00000493886 ITM2BQ9Y287 266 aa14.04□□□□□ -0.16
VCP-207ENST00000493886 MYO16Q9Y6X6 1858 aa14.03□□□□□ -0.16
VCP-207ENST00000493886 DFFAO00273 331 aa14.03□□□□□ -0.16
VCP-207ENST00000493886 CCDC22O60826 627 aa14.03□□□□□ -0.16
VCP-207ENST00000493886 TADA2AO75478 443 aa14.03□□□□□ -0.16
VCP-207ENST00000493886 DLDP09622 509 aaKnown RBP14.03□□□□□ -0.16
VCP-207ENST00000493886 CRHR1P34998 444 aa14.03□□□□□ -0.16
VCP-207ENST00000493886 PPP2R5DQ14738 602 aa14.03□□□□□ -0.16
VCP-207ENST00000493886 NFE2Q16621 373 aaPredicted RBP14.03□□□□□ -0.16
VCP-207ENST00000493886 DEFB115Q30KQ5 88 aa14.03□□□□□ -0.16
VCP-207ENST00000493886 CES4AQ5XG92 561 aa14.03□□□□□ -0.16
VCP-207ENST00000493886 RASSF3Q86WH2 238 aa14.03□□□□□ -0.16
VCP-207ENST00000493886 FUBP3Q96I24 572 aaKnown RBP eCLIP14.03□□□□□ -0.16
VCP-207ENST00000493886 FCRL2Q96LA5 508 aaPredicted RBP14.03□□□□□ -0.16
VCP-207ENST00000493886 PGLYRP2Q96PD5 576 aa14.03□□□□□ -0.16
VCP-207ENST00000493886 BTBD10Q9BSF8 475 aa14.03□□□□□ -0.16
VCP-207ENST00000493886 IL1RAPL1Q9NZN1 696 aa14.03□□□□□ -0.16
VCP-207ENST00000493886 A0A1B0GVG6 124 aa14.03□□□□□ -0.16
VCP-207ENST00000493886 HOXC13P31276 330 aa14.03□□□□□ -0.16
VCP-207ENST00000493886 GPR15P49685 360 aa14.03□□□□□ -0.16
VCP-207ENST00000493886 TUBP50607 506 aa14.03□□□□□ -0.16
VCP-207ENST00000493886 KDSRQ06136 332 aa14.03□□□□□ -0.16
VCP-207ENST00000493886 ZNF33AQ06730 810 aa14.03□□□□□ -0.16
VCP-207ENST00000493886 BST1Q10588 318 aa14.03□□□□□ -0.16
VCP-207ENST00000493886 DDR2Q16832 855 aa14.03□□□□□ -0.16
VCP-207ENST00000493886 VARS2Q5ST30 1063 aaKnown RBP14.03□□□□□ -0.16
VCP-207ENST00000493886 MANEALQ5VSG8 457 aa14.03□□□□□ -0.16
VCP-207ENST00000493886 ARHGAP36Q6ZRI8 547 aa14.03□□□□□ -0.16
VCP-207ENST00000493886 LRRC8DQ7L1W4 858 aa14.03□□□□□ -0.16
VCP-207ENST00000493886 ARHGAP12Q8IWW6 846 aa14.03□□□□□ -0.16
VCP-207ENST00000493886 NUP93Q8N1F7 819 aa14.03□□□□□ -0.16
VCP-207ENST00000493886 ZNF398Q8TD17 642 aa14.03□□□□□ -0.16
VCP-207ENST00000493886 SKA1Q96BD8 255 aa14.03□□□□□ -0.16
VCP-207ENST00000493886 PTCD3Q96EY7 689 aaKnown RBP14.03□□□□□ -0.16
VCP-207ENST00000493886 CERS2Q96G23 380 aa14.03□□□□□ -0.16
VCP-207ENST00000493886 NSL1Q96IY1 281 aa14.03□□□□□ -0.16
VCP-207ENST00000493886 FCRL3Q96P31 734 aaPredicted RBP14.03□□□□□ -0.16
VCP-207ENST00000493886 CATSPERBQ9H7T0 1116 aa14.03□□□□□ -0.16
VCP-207ENST00000493886 NMRK1Q9NWW6 199 aa14.03□□□□□ -0.16
VCP-207ENST00000493886 OSER1Q9NX31 292 aa14.03□□□□□ -0.16
VCP-207ENST00000493886 TMEM161AQ9NX61 479 aa14.03□□□□□ -0.16
VCP-207ENST00000493886 TAS2R1Q9NYW7 299 aa14.03□□□□□ -0.16
VCP-207ENST00000493886 ZFATQ9P243 1243 aa14.03□□□□□ -0.16
VCP-207ENST00000493886 PPARGC1AQ9UBK2 798 aaKnown RBP14.03□□□□□ -0.16
VCP-207ENST00000493886 PSAT1Q9Y617 370 aa14.03□□□□□ -0.16
VCP-207ENST00000493886 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.03□□□□□ -0.16
VCP-207ENST00000493886 ARVCFO00192 962 aa14.02□□□□□ -0.16
VCP-207ENST00000493886 GSC2O15499 205 aa14.02□□□□□ -0.16
VCP-207ENST00000493886 FGF10O15520 208 aaPredicted RBP14.02□□□□□ -0.16
VCP-207ENST00000493886 ERVK-10P10266 1014 aa14.02□□□□□ -0.16
VCP-207ENST00000493886 HTR7P34969 479 aa14.02□□□□□ -0.16
VCP-207ENST00000493886 BLMHQ13867 455 aa14.02□□□□□ -0.16
VCP-207ENST00000493886 CHI3L2Q15782 390 aa14.02□□□□□ -0.16
VCP-207ENST00000493886 ANO7Q6IWH7 933 aa14.02□□□□□ -0.16
VCP-207ENST00000493886 IQCF2Q8IXL9 164 aa14.02□□□□□ -0.16
VCP-207ENST00000493886 USP33Q8TEY7 942 aa14.02□□□□□ -0.16
VCP-207ENST00000493886 ZNF669Q96BR6 464 aaPredicted RBP14.02□□□□□ -0.16
VCP-207ENST00000493886 CLPTM1LQ96KA5 538 aa14.02□□□□□ -0.16
VCP-207ENST00000493886 TSGA13Q96PP4 275 aa14.02□□□□□ -0.16
VCP-207ENST00000493886 CFHR5Q9BXR6 569 aa14.02□□□□□ -0.16
VCP-207ENST00000493886 HMX1Q9NP08 348 aaPredicted RBP14.02□□□□□ -0.16
VCP-207ENST00000493886 BATF3Q9NR55 127 aa14.02□□□□□ -0.16
VCP-207ENST00000493886 CREBZFQ9NS37 354 aa14.02□□□□□ -0.16
VCP-207ENST00000493886 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.02□□□□□ -0.16
VCP-207ENST00000493886 SCML2Q9UQR0 700 aa14.02□□□□□ -0.16
VCP-207ENST00000493886 KLF11O14901 512 aa14.02□□□□□ -0.17
VCP-207ENST00000493886 SYN3O14994 580 aa14.02□□□□□ -0.17
VCP-207ENST00000493886 MOCS2O96007 188 aaPredicted RBP14.02□□□□□ -0.17
VCP-207ENST00000493886 CCNCP24863 283 aa14.02□□□□□ -0.17
VCP-207ENST00000493886 GRK4P32298 578 aa14.02□□□□□ -0.17
VCP-207ENST00000493886 MON1AQ86VX9 555 aa14.02□□□□□ -0.17
VCP-207ENST00000493886 ATPAF2Q8N5M1 289 aa14.02□□□□□ -0.17
VCP-207ENST00000493886 LZTR1Q8N653 840 aa14.02□□□□□ -0.17
VCP-207ENST00000493886 CNTD1Q8N815 330 aa14.02□□□□□ -0.17
VCP-207ENST00000493886 DNAJC9Q8WXX5 260 aa14.02□□□□□ -0.17
VCP-207ENST00000493886 C8orf48Q96LL4 319 aa14.02□□□□□ -0.17
VCP-207ENST00000493886 SERPINB11Q96P15 392 aa14.02□□□□□ -0.17
VCP-207ENST00000493886 APOL2Q9BQE5 337 aa14.02□□□□□ -0.17
VCP-207ENST00000493886 SAR1AQ9NR31 198 aa14.02□□□□□ -0.17
VCP-207ENST00000493886 UBAP1Q9NZ09 502 aa14.02□□□□□ -0.17
VCP-207ENST00000493886 UBP1Q9NZI7 540 aa14.02□□□□□ -0.17
VCP-207ENST00000493886 RABL2AQ9UBK7 228 aaPredicted RBP14.02□□□□□ -0.17
VCP-207ENST00000493886 LNPEPQ9UIQ6 1025 aa14.02□□□□□ -0.17
VCP-207ENST00000493886 E2F8A0AVK6 867 aa14.01□□□□□ -0.17
VCP-207ENST00000493886 KCNU1A8MYU2 1149 aa14.01□□□□□ -0.17
VCP-207ENST00000493886 TRAFD1O14545 582 aaPredicted RBP14.01□□□□□ -0.17
VCP-207ENST00000493886 ALDOAP04075 364 aaKnown RBP14.01□□□□□ -0.17
VCP-207ENST00000493886 SELPP16109 830 aa14.01□□□□□ -0.17
VCP-207ENST00000493886 PRPSAP1Q14558 356 aa14.01□□□□□ -0.17
VCP-207ENST00000493886 WASHC2DQ5SRD0 308 aa14.01□□□□□ -0.17
VCP-207ENST00000493886 CERCAMQ5T4B2 595 aa14.01□□□□□ -0.17
VCP-207ENST00000493886 ARTNQ5T4W7 220 aa14.01□□□□□ -0.17
VCP-207ENST00000493886 TMEM135Q86UB9 458 aa14.01□□□□□ -0.17
VCP-207ENST00000493886 TREML1Q86YW5 311 aa14.01□□□□□ -0.17
VCP-207ENST00000493886 ACMSDQ8TDX5 336 aa14.01□□□□□ -0.17
VCP-207ENST00000493886 FAM161BQ96MY7 647 aa14.01□□□□□ -0.17
VCP-207ENST00000493886 PCDHB5Q9Y5E4 795 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms