RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 TRIM62Q9BVG3 475 aa14.05□□□□□ -0.16
SAMM50-204ENST00000493161 GTPBP4Q9BZE4 634 aaKnown RBP14.05□□□□□ -0.16
SAMM50-204ENST00000493161 UBE2TQ9NPD8 197 aaPredicted RBP14.05□□□□□ -0.16
SAMM50-204ENST00000493161 ANLNQ9NQW6 1124 aa14.05□□□□□ -0.16
SAMM50-204ENST00000493161 SLC12A6Q9UHW9 1150 aa14.05□□□□□ -0.16
SAMM50-204ENST00000493161 SNX10Q9Y5X0 201 aa14.05□□□□□ -0.16
SAMM50-204ENST00000493161 HS3ST4Q9Y661 456 aa14.05□□□□□ -0.16
SAMM50-204ENST00000493161 A0A1W2PNU3 283 aaPredicted RBP14.04□□□□□ -0.16
SAMM50-204ENST00000493161 PYCARD-AS1I3L0S3 204 aa14.04□□□□□ -0.16
SAMM50-204ENST00000493161 KPNA3O00505 521 aaPredicted RBP14.04□□□□□ -0.16
SAMM50-204ENST00000493161 PSMA7O14818 248 aa14.04□□□□□ -0.16
SAMM50-204ENST00000493161 P4HA2O15460 535 aa14.04□□□□□ -0.16
SAMM50-204ENST00000493161 THAP12O43422 761 aa14.04□□□□□ -0.16
SAMM50-204ENST00000493161 CSO75390 466 aaKnown RBP14.04□□□□□ -0.16
SAMM50-204ENST00000493161 NEBLO76041 1014 aa14.04□□□□□ -0.16
SAMM50-204ENST00000493161 SMC2O95347 1197 aa14.04□□□□□ -0.16
SAMM50-204ENST00000493161 BMP6P22004 513 aa14.04□□□□□ -0.16
SAMM50-204ENST00000493161 RRM1P23921 792 aa14.04□□□□□ -0.16
SAMM50-204ENST00000493161 CCR1P32246 355 aa14.04□□□□□ -0.16
SAMM50-204ENST00000493161 CHRNA3P32297 505 aa14.04□□□□□ -0.16
SAMM50-204ENST00000493161 PCBP4P57723 403 aaKnown RBP14.04□□□□□ -0.16
SAMM50-204ENST00000493161 CDK17Q00537 523 aa14.04□□□□□ -0.16
SAMM50-204ENST00000493161 APBA1Q02410 837 aa14.04□□□□□ -0.16
SAMM50-204ENST00000493161 CETN1Q12798 172 aa14.04□□□□□ -0.16
SAMM50-204ENST00000493161 NME3Q13232 169 aa14.04□□□□□ -0.16
SAMM50-204ENST00000493161 OR6B2Q6IFH4 312 aa14.04□□□□□ -0.16
SAMM50-204ENST00000493161 KLHL10Q6JEL2 608 aa14.04□□□□□ -0.16
SAMM50-204ENST00000493161 HORMAD1Q86X24 394 aa14.04□□□□□ -0.16
SAMM50-204ENST00000493161 TRIM59Q8IWR1 403 aa14.04□□□□□ -0.16
SAMM50-204ENST00000493161 DHTKD1Q96HY7 919 aaPredicted RBP14.04□□□□□ -0.16
SAMM50-204ENST00000493161 ZNF578Q96N58 590 aaPredicted RBP14.04□□□□□ -0.16
SAMM50-204ENST00000493161 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.04□□□□□ -0.16
SAMM50-204ENST00000493161 SIK2Q9H0K1 926 aa14.04□□□□□ -0.16
SAMM50-204ENST00000493161 MAN1B1Q9UKM7 699 aa14.04□□□□□ -0.16
SAMM50-204ENST00000493161 TBC1D30Q9Y2I9 924 aa14.04□□□□□ -0.16
SAMM50-204ENST00000493161 PMS2P1A4D2B8 440 aa14.03□□□□□ -0.16
SAMM50-204ENST00000493161 BECN2A8MW95 431 aa14.03□□□□□ -0.16
SAMM50-204ENST00000493161 PPP1R3GB7ZBB8 358 aa14.03□□□□□ -0.16
SAMM50-204ENST00000493161 I6L893 689 aaPredicted RBP14.03□□□□□ -0.16
SAMM50-204ENST00000493161 ERVH48-1M5A8F1 160 aa14.03□□□□□ -0.16
SAMM50-204ENST00000493161 CASC3O15234 703 aaKnown RBP14.03□□□□□ -0.16
SAMM50-204ENST00000493161 MED7O43513 233 aa14.03□□□□□ -0.16
SAMM50-204ENST00000493161 PAGE1O75459 146 aa14.03□□□□□ -0.16
SAMM50-204ENST00000493161 SLC2A3P11169 496 aa14.03□□□□□ -0.16
SAMM50-204ENST00000493161 KRT10P13645 584 aa14.03□□□□□ -0.16
SAMM50-204ENST00000493161 TFE3P19532 575 aaPredicted RBP14.03□□□□□ -0.16
SAMM50-204ENST00000493161 GNA15P30679 374 aa14.03□□□□□ -0.16
SAMM50-204ENST00000493161 OXCT1P55809 520 aa14.03□□□□□ -0.16
SAMM50-204ENST00000493161 LY6DQ14210 128 aa14.03□□□□□ -0.16
SAMM50-204ENST00000493161 FGL2Q14314 439 aa14.03□□□□□ -0.16
SAMM50-204ENST00000493161 ALFQ53S48 1182 aa14.03□□□□□ -0.16
SAMM50-204ENST00000493161 TAF1BQ53T94 588 aaPredicted RBP14.03□□□□□ -0.16
SAMM50-204ENST00000493161 OTUD1Q5VV17 481 aaPredicted RBP14.03□□□□□ -0.16
SAMM50-204ENST00000493161 LINGO4Q6UY18 593 aa14.03□□□□□ -0.16
SAMM50-204ENST00000493161 Q6ZSR6 202 aa14.03□□□□□ -0.16
SAMM50-204ENST00000493161 ABI3BPQ7Z7G0 1075 aa14.03□□□□□ -0.16
SAMM50-204ENST00000493161 PASD1Q8IV76 773 aa14.03□□□□□ -0.16
SAMM50-204ENST00000493161 ATP11CQ8NB49 1132 aa14.03□□□□□ -0.16
SAMM50-204ENST00000493161 CCDC34Q96HJ3 373 aa14.03□□□□□ -0.16
SAMM50-204ENST00000493161 BMFQ96LC9 184 aa14.03□□□□□ -0.16
SAMM50-204ENST00000493161 MUC3BQ9H195 1237 aa14.03□□□□□ -0.16
SAMM50-204ENST00000493161 TNKS2Q9H2K2 1166 aa14.03□□□□□ -0.16
SAMM50-204ENST00000493161 ASCL3Q9NQ33 180 aa14.03□□□□□ -0.16
SAMM50-204ENST00000493161 DNAJC28Q9NX36 388 aa14.03□□□□□ -0.16
SAMM50-204ENST00000493161 NLGN3Q9NZ94 848 aa14.03□□□□□ -0.16
SAMM50-204ENST00000493161 VPS51Q9UID3 782 aa14.03□□□□□ -0.16
SAMM50-204ENST00000493161 HS3ST2Q9Y278 367 aa14.03□□□□□ -0.16
SAMM50-204ENST00000493161 TDRD6O60522 2096 aaKnown RBP14.03□□□□□ -0.16
SAMM50-204ENST00000493161 COL27A1Q8IZC6 1860 aaPredicted RBP14.02□□□□□ -0.16
SAMM50-204ENST00000493161 A0A0D9SEW6 157 aa14.02□□□□□ -0.17
SAMM50-204ENST00000493161 POM121BA6NF01 834 aa14.02□□□□□ -0.17
SAMM50-204ENST00000493161 J3QKU1 62 aa14.02□□□□□ -0.17
SAMM50-204ENST00000493161 K7ESM1 405 aa14.02□□□□□ -0.17
SAMM50-204ENST00000493161 RAD51BO15315 384 aa14.02□□□□□ -0.17
SAMM50-204ENST00000493161 KLK10O43240 276 aa14.02□□□□□ -0.17
SAMM50-204ENST00000493161 CLDN11O75508 207 aa14.02□□□□□ -0.17
SAMM50-204ENST00000493161 DXOO77932 396 aaKnown RBP14.02□□□□□ -0.17
SAMM50-204ENST00000493161 ENDOD1O94919 500 aa14.02□□□□□ -0.17
SAMM50-204ENST00000493161 PCDH8O95206 1070 aa14.02□□□□□ -0.17
SAMM50-204ENST00000493161 ADCY5O95622 1261 aa14.02□□□□□ -0.17
SAMM50-204ENST00000493161 ERBB2P04626 1255 aa14.02□□□□□ -0.17
SAMM50-204ENST00000493161 TGM2P21980 687 aa14.02□□□□□ -0.17
SAMM50-204ENST00000493161 HNRNPA2B1P22626 353 aaKnown RBP14.02□□□□□ -0.17
SAMM50-204ENST00000493161 AKT2P31751 481 aa14.02□□□□□ -0.17
SAMM50-204ENST00000493161 LSSP48449 732 aa14.02□□□□□ -0.17
SAMM50-204ENST00000493161 STX17P56962 302 aa14.02□□□□□ -0.17
SAMM50-204ENST00000493161 TMPRSS3P57727 454 aa14.02□□□□□ -0.17
SAMM50-204ENST00000493161 FZD2Q14332 565 aa14.02□□□□□ -0.17
SAMM50-204ENST00000493161 MEA1Q16626 185 aa14.02□□□□□ -0.17
SAMM50-204ENST00000493161 C5orf22Q49AR2 442 aa14.02□□□□□ -0.17
SAMM50-204ENST00000493161 TMEM259Q4ZIN3 620 aa14.02□□□□□ -0.17
SAMM50-204ENST00000493161 HS1BP3Q53T59 392 aa14.02□□□□□ -0.17
SAMM50-204ENST00000493161 ARSIQ5FYB1 569 aa14.02□□□□□ -0.17
SAMM50-204ENST00000493161 TPRG1LQ5T0D9 272 aa14.02□□□□□ -0.17
SAMM50-204ENST00000493161 ARTNQ5T4W7 220 aa14.02□□□□□ -0.17
SAMM50-204ENST00000493161 FAM183BPQ6ZVS7 135 aa14.02□□□□□ -0.17
SAMM50-204ENST00000493161 TMIEQ8NEW7 156 aa14.02□□□□□ -0.17
SAMM50-204ENST00000493161 GRIN3AQ8TCU5 1115 aa14.02□□□□□ -0.17
SAMM50-204ENST00000493161 NELFBQ8WX92 580 aa14.02□□□□□ -0.17
SAMM50-204ENST00000493161 VCPIP1Q96JH7 1222 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms