RNA–Protein interactions for RNA: ENST00000492539.5

NELFE-212, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-212ENST00000492539 TPD52L1Q16890 204 aaPredicted RBP20.4■□□□□ 0.86
NELFE-212ENST00000492539 PTPN20Q4JDL3 420 aa20.4■□□□□ 0.86
NELFE-212ENST00000492539 GBP6Q6ZN66 633 aa20.4■□□□□ 0.86
NELFE-212ENST00000492539 KLHDC7BQ96G42 594 aa20.4■□□□□ 0.86
NELFE-212ENST00000492539 NOX5Q96PH1 765 aa20.4■□□□□ 0.86
NELFE-212ENST00000492539 ANLNQ9NQW6 1124 aa20.4■□□□□ 0.86
NELFE-212ENST00000492539 ARHGEF38Q9NXL2 777 aa20.4■□□□□ 0.86
NELFE-212ENST00000492539 AJAP1Q9UKB5 411 aaPredicted RBP20.4■□□□□ 0.86
NELFE-212ENST00000492539 M0QYT0 321 aa20.39■□□□□ 0.85
NELFE-212ENST00000492539 SDC3O75056 442 aa20.39■□□□□ 0.85
NELFE-212ENST00000492539 CNTN5O94779 1100 aa20.39■□□□□ 0.85
NELFE-212ENST00000492539 MT-CO1P00395 513 aa20.39■□□□□ 0.85
NELFE-212ENST00000492539 ITPKBP27987 946 aa20.39■□□□□ 0.85
NELFE-212ENST00000492539 INSM1Q01101 510 aaPredicted RBP20.39■□□□□ 0.85
NELFE-212ENST00000492539 SEMG2Q02383 582 aa20.39■□□□□ 0.85
NELFE-212ENST00000492539 TYRO3Q06418 890 aa20.39■□□□□ 0.85
NELFE-212ENST00000492539 EXOC3L4Q17RC7 722 aa20.39■□□□□ 0.85
NELFE-212ENST00000492539 ALFQ53S48 1182 aa20.39■□□□□ 0.85
NELFE-212ENST00000492539 NEK5Q6P3R8 708 aa20.39■□□□□ 0.85
NELFE-212ENST00000492539 IRF2BP1Q8IU81 584 aa20.39■□□□□ 0.85
NELFE-212ENST00000492539 ZNF683Q8IZ20 524 aa20.39■□□□□ 0.85
NELFE-212ENST00000492539 SLC25A45Q8N413 288 aa20.39■□□□□ 0.85
NELFE-212ENST00000492539 OR2A12Q8NGT7 310 aa20.39■□□□□ 0.85
NELFE-212ENST00000492539 ENOX1Q8TC92 643 aaKnown RBP20.39■□□□□ 0.85
NELFE-212ENST00000492539 NPY6RQ99463 290 aa20.39■□□□□ 0.85
NELFE-212ENST00000492539 MUC3BQ9H195 1237 aa20.39■□□□□ 0.85
NELFE-212ENST00000492539 PIGVQ9NUD9 493 aa20.39■□□□□ 0.85
NELFE-212ENST00000492539 RRN3Q9NYV6 651 aa20.39■□□□□ 0.85
NELFE-212ENST00000492539 AK5Q9Y6K8 562 aa20.39■□□□□ 0.85
NELFE-212ENST00000492539 I6L893 689 aaPredicted RBP20.38■□□□□ 0.85
NELFE-212ENST00000492539 TRIM38O00635 465 aa20.38■□□□□ 0.85
NELFE-212ENST00000492539 SIGLEC6O43699 453 aa20.38■□□□□ 0.85
NELFE-212ENST00000492539 BNIP3LO60238 219 aa20.38■□□□□ 0.85
NELFE-212ENST00000492539 SNAP91O60641 907 aa20.38■□□□□ 0.85
NELFE-212ENST00000492539 ADCY5O95622 1261 aa20.38■□□□□ 0.85
NELFE-212ENST00000492539 THEGLP0DJG4 465 aa20.38■□□□□ 0.85
NELFE-212ENST00000492539 PON1P27169 355 aa20.38■□□□□ 0.85
NELFE-212ENST00000492539 CHRNA3P32297 505 aa20.38■□□□□ 0.85
NELFE-212ENST00000492539 CXCR3P49682 368 aa20.38■□□□□ 0.85
NELFE-212ENST00000492539 SNX16P57768 344 aa20.38■□□□□ 0.85
NELFE-212ENST00000492539 KRT83P78385 493 aa20.38■□□□□ 0.85
NELFE-212ENST00000492539 PTK2Q05397 1052 aa20.38■□□□□ 0.85
NELFE-212ENST00000492539 ZNF211Q13398 564 aaPredicted RBP20.38■□□□□ 0.85
NELFE-212ENST00000492539 BRMS1LQ5PSV4 323 aa20.38■□□□□ 0.85
NELFE-212ENST00000492539 FAM114A1Q8IWE2 563 aa20.38■□□□□ 0.85
NELFE-212ENST00000492539 DCBLD1Q8N8Z6 715 aa20.38■□□□□ 0.85
NELFE-212ENST00000492539 TMIEQ8NEW7 156 aa20.38■□□□□ 0.85
NELFE-212ENST00000492539 SNIP1Q8TAD8 396 aaKnown RBP20.38■□□□□ 0.85
NELFE-212ENST00000492539 ARRDC3Q96B67 414 aa20.38■□□□□ 0.85
NELFE-212ENST00000492539 UBL7Q96S82 380 aaPredicted RBP20.38■□□□□ 0.85
NELFE-212ENST00000492539 C2orf49Q9BVC5 232 aaPredicted RBP20.38■□□□□ 0.85
NELFE-212ENST00000492539 TKTL2Q9H0I9 626 aa20.38■□□□□ 0.85
NELFE-212ENST00000492539 SIK2Q9H0K1 926 aa20.38■□□□□ 0.85
NELFE-212ENST00000492539 PRORYQ9H606 182 aa20.38■□□□□ 0.85
NELFE-212ENST00000492539 SIX2Q9NPC8 291 aa20.38■□□□□ 0.85
NELFE-212ENST00000492539 VPS51Q9UID3 782 aa20.38■□□□□ 0.85
NELFE-212ENST00000492539 CLCA2Q9UQC9 943 aa20.38■□□□□ 0.85
NELFE-212ENST00000492539 TRPM6Q9BX84 2022 aa20.37■□□□□ 0.85
NELFE-212ENST00000492539 A0A1W2PQU0 124 aa20.37■□□□□ 0.85
NELFE-212ENST00000492539 RNF103O00237 685 aa20.37■□□□□ 0.85
NELFE-212ENST00000492539 RHOCP08134 193 aa20.37■□□□□ 0.85
NELFE-212ENST00000492539 CLCN1P35523 988 aa20.37■□□□□ 0.85
NELFE-212ENST00000492539 KCNMA1Q12791 1236 aa20.37■□□□□ 0.85
NELFE-212ENST00000492539 SETD3Q86TU7 594 aaPredicted RBP20.37■□□□□ 0.85
NELFE-212ENST00000492539 HORMAD1Q86X24 394 aa20.37■□□□□ 0.85
NELFE-212ENST00000492539 ZDHHC17Q8IUH5 632 aa20.37■□□□□ 0.85
NELFE-212ENST00000492539 DCAF4L2Q8NA75 395 aa20.37■□□□□ 0.85
NELFE-212ENST00000492539 ATP11CQ8NB49 1132 aa20.37■□□□□ 0.85
NELFE-212ENST00000492539 NT5C3BQ969T7 300 aa20.37■□□□□ 0.85
NELFE-212ENST00000492539 PGAP3Q96FM1 320 aaPredicted RBP20.37■□□□□ 0.85
NELFE-212ENST00000492539 CCDC114Q96M63 670 aa20.37■□□□□ 0.85
NELFE-212ENST00000492539 WDCPQ9H6R7 721 aa20.37■□□□□ 0.85
NELFE-212ENST00000492539 KLHL11Q9NVR0 708 aa20.37■□□□□ 0.85
NELFE-212ENST00000492539 FARP1Q9Y4F1 1045 aaPredicted RBP20.37■□□□□ 0.85
NELFE-212ENST00000492539 KALRNO60229 2985 aa20.37■□□□□ 0.85
NELFE-212ENST00000492539 EIF4E1BA6NMX2 242 aaKnown RBP20.36■□□□□ 0.85
NELFE-212ENST00000492539 DRGXA6NNA5 263 aa20.36■□□□□ 0.85
NELFE-212ENST00000492539 K7ERQ8 282 aa20.36■□□□□ 0.85
NELFE-212ENST00000492539 KPNA3O00505 521 aaPredicted RBP20.36■□□□□ 0.85
NELFE-212ENST00000492539 SLC31A1O15431 190 aa20.36■□□□□ 0.85
NELFE-212ENST00000492539 GIMD1P0DJR0 217 aa20.36■□□□□ 0.85
NELFE-212ENST00000492539 PRLRP16471 622 aa20.36■□□□□ 0.85
NELFE-212ENST00000492539 TFE3P19532 575 aaPredicted RBP20.36■□□□□ 0.85
NELFE-212ENST00000492539 GLDCP23378 1020 aa20.36■□□□□ 0.85
NELFE-212ENST00000492539 DGKAP23743 735 aa20.36■□□□□ 0.85
NELFE-212ENST00000492539 KRT9P35527 623 aa20.36■□□□□ 0.85
NELFE-212ENST00000492539 CLCN6P51797 869 aa20.36■□□□□ 0.85
NELFE-212ENST00000492539 CCDC15Q0P6D6 951 aa20.36■□□□□ 0.85
NELFE-212ENST00000492539 ZNF284Q2VY69 593 aa20.36■□□□□ 0.85
NELFE-212ENST00000492539 ARTNQ5T4W7 220 aa20.36■□□□□ 0.85
NELFE-212ENST00000492539 LRRC69Q6ZNQ3 347 aa20.36■□□□□ 0.85
NELFE-212ENST00000492539 SLC47A2Q86VL8 602 aa20.36■□□□□ 0.85
NELFE-212ENST00000492539 OR4C6Q8NH72 309 aa20.36■□□□□ 0.85
NELFE-212ENST00000492539 MYOCQ99972 504 aa20.36■□□□□ 0.85
NELFE-212ENST00000492539 UCKL1Q9NWZ5 548 aa20.36■□□□□ 0.85
NELFE-212ENST00000492539 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.36■□□□□ 0.85
NELFE-212ENST00000492539 STAP1Q9ULZ2 295 aa20.36■□□□□ 0.85
NELFE-212ENST00000492539 IGLV3-10A0A075B6K4 115 aa20.35■□□□□ 0.85
NELFE-212ENST00000492539 RRP8O43159 456 aaKnown RBP20.35■□□□□ 0.85
NELFE-212ENST00000492539 SMAD6O43541 496 aaKnown RBP20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms