RNA–Protein interactions for RNA: ENST00000492451.1

PTPN7-215, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 5

Gene PTPN7, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-215ENST00000492451 OSGEPQ9NPF4 335 aa14.12□□□□□ -0.15
PTPN7-215ENST00000492451 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.12□□□□□ -0.15
PTPN7-215ENST00000492451 MBD1Q9UIS9 605 aaPredicted RBP14.12□□□□□ -0.15
PTPN7-215ENST00000492451 CYP8B1Q9UNU6 501 aa14.12□□□□□ -0.15
PTPN7-215ENST00000492451 PCDHGA5Q9Y5G8 931 aa14.12□□□□□ -0.15
PTPN7-215ENST00000492451 EPN1Q9Y6I3 576 aaPredicted RBP14.12□□□□□ -0.15
PTPN7-215ENST00000492451 THADAQ6YHU6 1953 aa14.11□□□□□ -0.15
PTPN7-215ENST00000492451 MED19A0JLT2 244 aaPredicted RBP14.11□□□□□ -0.15
PTPN7-215ENST00000492451 KDELR3O43731 214 aa14.11□□□□□ -0.15
PTPN7-215ENST00000492451 GDF9O60383 454 aa14.11□□□□□ -0.15
PTPN7-215ENST00000492451 NDUFS2O75306 463 aa14.11□□□□□ -0.15
PTPN7-215ENST00000492451 EPN2O95208 641 aa14.11□□□□□ -0.15
PTPN7-215ENST00000492451 NDUFA10O95299 355 aa14.11□□□□□ -0.15
PTPN7-215ENST00000492451 ADH1BP00325 375 aa14.11□□□□□ -0.15
PTPN7-215ENST00000492451 MT-CO1P00395 513 aa14.11□□□□□ -0.15
PTPN7-215ENST00000492451 KRT7P08729 469 aa14.11□□□□□ -0.15
PTPN7-215ENST00000492451 TCF4P15884 667 aa14.11□□□□□ -0.15
PTPN7-215ENST00000492451 GOT1P17174 413 aa14.11□□□□□ -0.15
PTPN7-215ENST00000492451 GLDCP23378 1020 aa14.11□□□□□ -0.15
PTPN7-215ENST00000492451 CD6P30203 668 aa14.11□□□□□ -0.15
PTPN7-215ENST00000492451 ACVRL1P37023 503 aa14.11□□□□□ -0.15
PTPN7-215ENST00000492451 SERPINH1P50454 418 aaKnown RBP14.11□□□□□ -0.15
PTPN7-215ENST00000492451 RPL6Q02878 288 aaKnown RBP14.11□□□□□ -0.15
PTPN7-215ENST00000492451 MESDQ14696 234 aa14.11□□□□□ -0.15
PTPN7-215ENST00000492451 CST6Q15828 149 aa14.11□□□□□ -0.15
PTPN7-215ENST00000492451 SMTNL2Q2TAL5 461 aa14.11□□□□□ -0.15
PTPN7-215ENST00000492451 LINGO4Q6UY18 593 aa14.11□□□□□ -0.15
PTPN7-215ENST00000492451 USP30Q70CQ3 517 aa14.11□□□□□ -0.15
PTPN7-215ENST00000492451 ZNF354CQ86Y25 554 aa14.11□□□□□ -0.15
PTPN7-215ENST00000492451 LZTR1Q8N653 840 aa14.11□□□□□ -0.15
PTPN7-215ENST00000492451 SPC24Q8NBT2 197 aa14.11□□□□□ -0.15
PTPN7-215ENST00000492451 FAM129BQ96TA1 746 aa14.11□□□□□ -0.15
PTPN7-215ENST00000492451 BAG1Q99933 345 aaPredicted RBP14.11□□□□□ -0.15
PTPN7-215ENST00000492451 SMOC1Q9H4F8 434 aa14.11□□□□□ -0.15
PTPN7-215ENST00000492451 NOL6Q9H6R4 1146 aaKnown RBP14.11□□□□□ -0.15
PTPN7-215ENST00000492451 RXFP3Q9NSD7 469 aa14.11□□□□□ -0.15
PTPN7-215ENST00000492451 SEMA4GQ9NTN9 838 aa14.11□□□□□ -0.15
PTPN7-215ENST00000492451 CWC15Q9P013 229 aaKnown RBP14.11□□□□□ -0.15
PTPN7-215ENST00000492451 RCOR3Q9P2K3 495 aaPredicted RBP14.11□□□□□ -0.15
PTPN7-215ENST00000492451 NYNRINQ9P2P1 1898 aaKnown RBP14.11□□□□□ -0.15
PTPN7-215ENST00000492451 NCKAP1Q9Y2A7 1128 aa14.11□□□□□ -0.15
PTPN7-215ENST00000492451 PCDHA13Q9Y5I0 950 aa14.11□□□□□ -0.15
PTPN7-215ENST00000492451 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.1□□□□□ -0.15
PTPN7-215ENST00000492451 SOWAHDA6NJG2 315 aa14.1□□□□□ -0.15
PTPN7-215ENST00000492451 TMEM110-MUSTN1A8MSY1 372 aa14.1□□□□□ -0.15
PTPN7-215ENST00000492451 RASA4BC9J798 803 aa14.1□□□□□ -0.15
PTPN7-215ENST00000492451 MCF2LO15068 1137 aa14.1□□□□□ -0.15
PTPN7-215ENST00000492451 RASA4O43374 803 aa14.1□□□□□ -0.15
PTPN7-215ENST00000492451 ERCC2P18074 760 aa14.1□□□□□ -0.15
PTPN7-215ENST00000492451 C5AR1P21730 350 aa14.1□□□□□ -0.15
PTPN7-215ENST00000492451 DPP6P42658 865 aa14.1□□□□□ -0.15
PTPN7-215ENST00000492451 RECQLP46063 649 aaPredicted RBP14.1□□□□□ -0.15
PTPN7-215ENST00000492451 HADHBP55084 474 aaKnown RBP14.1□□□□□ -0.15
PTPN7-215ENST00000492451 GSDMDP57764 484 aa14.1□□□□□ -0.15
PTPN7-215ENST00000492451 ARF5P84085 180 aa14.1□□□□□ -0.15
PTPN7-215ENST00000492451 SERINC3Q13530 473 aa14.1□□□□□ -0.15
PTPN7-215ENST00000492451 DPYSQ14117 519 aa14.1□□□□□ -0.15
PTPN7-215ENST00000492451 KRT81Q14533 505 aa14.1□□□□□ -0.15
PTPN7-215ENST00000492451 FAM46CQ5VWP2 391 aa14.1□□□□□ -0.15
PTPN7-215ENST00000492451 C22orf39Q6P5X5 142 aa14.1□□□□□ -0.15
PTPN7-215ENST00000492451 Q6ZVU0 165 aa14.1□□□□□ -0.15
PTPN7-215ENST00000492451 POLNQ7Z5Q5 900 aa14.1□□□□□ -0.15
PTPN7-215ENST00000492451 CACUL1Q86Y37 369 aa14.1□□□□□ -0.15
PTPN7-215ENST00000492451 MMAAQ8IVH4 418 aaKnown RBP14.1□□□□□ -0.15
PTPN7-215ENST00000492451 MAP7D3Q8IWC1 876 aa14.1□□□□□ -0.15
PTPN7-215ENST00000492451 TMEFF1Q8IYR6 380 aa14.1□□□□□ -0.15
PTPN7-215ENST00000492451 STK40Q8N2I9 435 aa14.1□□□□□ -0.15
PTPN7-215ENST00000492451 PCDH20Q8N6Y1 951 aaKnown RBP14.1□□□□□ -0.15
PTPN7-215ENST00000492451 FRMD1Q8N878 549 aa14.1□□□□□ -0.15
PTPN7-215ENST00000492451 CASKIN2Q8WXE0 1202 aa14.1□□□□□ -0.15
PTPN7-215ENST00000492451 FOXJ1Q92949 421 aa14.1□□□□□ -0.15
PTPN7-215ENST00000492451 ISG20Q96AZ6 181 aaKnown RBP14.1□□□□□ -0.15
PTPN7-215ENST00000492451 CALR3Q96L12 384 aaKnown RBP14.1□□□□□ -0.15
PTPN7-215ENST00000492451 PCED1AQ9H1Q7 454 aa14.1□□□□□ -0.15
PTPN7-215ENST00000492451 ARRDC1-AS1Q9H2J1 176 aa14.1□□□□□ -0.15
PTPN7-215ENST00000492451 PABPC3Q9H361 631 aaKnown RBP14.1□□□□□ -0.15
PTPN7-215ENST00000492451 LRRC19Q9H756 370 aa14.1□□□□□ -0.15
PTPN7-215ENST00000492451 PCDH18Q9HCL0 1135 aa14.1□□□□□ -0.15
PTPN7-215ENST00000492451 WSB2Q9NYS7 404 aaPredicted RBP14.1□□□□□ -0.15
PTPN7-215ENST00000492451 ABCA7Q8IZY2 2146 aa14.09□□□□□ -0.15
PTPN7-215ENST00000492451 SDK1Q7Z5N4 2213 aa14.09□□□□□ -0.15
PTPN7-215ENST00000492451 A0A0A6YYK5 440 aaPredicted RBP14.09□□□□□ -0.15
PTPN7-215ENST00000492451 GOLGA6L3A6NEY3 463 aa14.09□□□□□ -0.15
PTPN7-215ENST00000492451 ARHGAP42A6NI28 874 aa14.09□□□□□ -0.15
PTPN7-215ENST00000492451 C1QTNF3-AMACRE9PGA6 284 aa14.09□□□□□ -0.15
PTPN7-215ENST00000492451 K7ERQ8 282 aa14.09□□□□□ -0.15
PTPN7-215ENST00000492451 SMAD6O43541 496 aaKnown RBP14.09□□□□□ -0.15
PTPN7-215ENST00000492451 BUB1O43683 1085 aa14.09□□□□□ -0.15
PTPN7-215ENST00000492451 FOXD2O60548 495 aaPredicted RBP14.09□□□□□ -0.15
PTPN7-215ENST00000492451 IL1BP01584 269 aa14.09□□□□□ -0.15
PTPN7-215ENST00000492451 VAV1P15498 845 aa14.09□□□□□ -0.15
PTPN7-215ENST00000492451 SLC8A1P32418 973 aa14.09□□□□□ -0.15
PTPN7-215ENST00000492451 SLC1A1P43005 524 aa14.09□□□□□ -0.15
PTPN7-215ENST00000492451 NOP2P46087 812 aaKnown RBP14.09□□□□□ -0.15
PTPN7-215ENST00000492451 DHPSP49366 369 aaPredicted RBP14.09□□□□□ -0.15
PTPN7-215ENST00000492451 CDH6P55285 790 aa14.09□□□□□ -0.15
PTPN7-215ENST00000492451 PUM1Q14671 1186 aaKnown RBP eCLIP14.09□□□□□ -0.155e-6■□□□□ 10.2
PTPN7-215ENST00000492451 PDK2Q15119 407 aa14.09□□□□□ -0.15
PTPN7-215ENST00000492451 SF3A2Q15428 464 aaKnown RBP14.09□□□□□ -0.15
PTPN7-215ENST00000492451 CSRP2Q16527 193 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms