RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 IL9RQ01113 521 aa9.36□□□□□ -0.91
HDAC3-212ENST00000492407 CNTN1Q12860 1018 aa9.36□□□□□ -0.91
HDAC3-212ENST00000492407 PROX2Q3B8N5 592 aa9.36□□□□□ -0.91
HDAC3-212ENST00000492407 ACCSLQ4AC99 568 aa9.36□□□□□ -0.91
HDAC3-212ENST00000492407 HS1BP3Q53T59 392 aa9.36□□□□□ -0.91
HDAC3-212ENST00000492407 PRAMEF14Q5SWL7 426 aa9.36□□□□□ -0.91
HDAC3-212ENST00000492407 OR6B2Q6IFH4 312 aa9.36□□□□□ -0.91
HDAC3-212ENST00000492407 SPATS2Q86XZ4 545 aaKnown RBP9.36□□□□□ -0.91
HDAC3-212ENST00000492407 FAM71AQ8IYT1 594 aa9.36□□□□□ -0.91
HDAC3-212ENST00000492407 DCAF4L2Q8NA75 395 aa9.36□□□□□ -0.91
HDAC3-212ENST00000492407 TMEM145Q8NBT3 493 aa9.36□□□□□ -0.91
HDAC3-212ENST00000492407 TMEM35BQ8NCS4 154 aa9.36□□□□□ -0.91
HDAC3-212ENST00000492407 PPP1R16AQ96I34 528 aa9.36□□□□□ -0.91
HDAC3-212ENST00000492407 NPY6RQ99463 290 aa9.36□□□□□ -0.91
HDAC3-212ENST00000492407 HDAC8Q9BY41 377 aa9.36□□□□□ -0.91
HDAC3-212ENST00000492407 CEP44Q9C0F1 390 aa9.36□□□□□ -0.91
HDAC3-212ENST00000492407 SYNCQ9H7C4 482 aa9.36□□□□□ -0.91
HDAC3-212ENST00000492407 EVA1BQ9NVM1 165 aa9.36□□□□□ -0.91
HDAC3-212ENST00000492407 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.36□□□□□ -0.91
HDAC3-212ENST00000492407 SARDHQ9UL12 918 aa9.36□□□□□ -0.91
HDAC3-212ENST00000492407 VANGL2Q9ULK5 521 aa9.36□□□□□ -0.91
HDAC3-212ENST00000492407 HS3ST3A1Q9Y663 406 aa9.36□□□□□ -0.91
HDAC3-212ENST00000492407 PLXNB3Q9ULL4 1909 aa9.36□□□□□ -0.91
HDAC3-212ENST00000492407 IGLV3-10A0A075B6K4 115 aa9.35□□□□□ -0.91
HDAC3-212ENST00000492407 ILVBLA1L0T0 632 aa9.35□□□□□ -0.91
HDAC3-212ENST00000492407 FAM149AA5PLN7 773 aa9.35□□□□□ -0.91
HDAC3-212ENST00000492407 VGLL3A8MV65 326 aa9.35□□□□□ -0.91
HDAC3-212ENST00000492407 GP1BAP07359 652 aa9.35□□□□□ -0.91
HDAC3-212ENST00000492407 RHOCP08134 193 aa9.35□□□□□ -0.91
HDAC3-212ENST00000492407 SRCP12931 536 aa9.35□□□□□ -0.91
HDAC3-212ENST00000492407 VAV1P15498 845 aa9.35□□□□□ -0.91
HDAC3-212ENST00000492407 AKT2P31751 481 aa9.35□□□□□ -0.91
HDAC3-212ENST00000492407 EIF2S3P41091 472 aaKnown RBP9.35□□□□□ -0.91
HDAC3-212ENST00000492407 ABCG1P45844 678 aa9.35□□□□□ -0.91
HDAC3-212ENST00000492407 KCNMA1Q12791 1236 aa9.35□□□□□ -0.91
HDAC3-212ENST00000492407 BNIP3Q12983 259 aa9.35□□□□□ -0.91
HDAC3-212ENST00000492407 TARDBPQ13148 414 aaKnown RBP eCLIP9.35□□□□□ -0.91
HDAC3-212ENST00000492407 NME3Q13232 169 aa9.35□□□□□ -0.91
HDAC3-212ENST00000492407 ARHGAP44Q17R89 818 aa9.35□□□□□ -0.91
HDAC3-212ENST00000492407 SLC25A52Q3SY17 297 aa9.35□□□□□ -0.91
HDAC3-212ENST00000492407 PIP5KL1Q5T9C9 394 aa9.35□□□□□ -0.91
HDAC3-212ENST00000492407 RETSATQ6NUM9 610 aa9.35□□□□□ -0.91
HDAC3-212ENST00000492407 LRRC69Q6ZNQ3 347 aa9.35□□□□□ -0.91
HDAC3-212ENST00000492407 FAM183BPQ6ZVS7 135 aa9.35□□□□□ -0.91
HDAC3-212ENST00000492407 HORMAD1Q86X24 394 aa9.35□□□□□ -0.91
HDAC3-212ENST00000492407 IRF2BP1Q8IU81 584 aa9.35□□□□□ -0.91
HDAC3-212ENST00000492407 FAM114A1Q8IWE2 563 aa9.35□□□□□ -0.91
HDAC3-212ENST00000492407 PLPP6Q8IY26 295 aa9.35□□□□□ -0.91
HDAC3-212ENST00000492407 ZNF683Q8IZ20 524 aa9.35□□□□□ -0.91
HDAC3-212ENST00000492407 DCBLD1Q8N8Z6 715 aa9.35□□□□□ -0.91
HDAC3-212ENST00000492407 MSANTD4Q8NCY6 345 aa9.35□□□□□ -0.91
HDAC3-212ENST00000492407 OR2A12Q8NGT7 310 aa9.35□□□□□ -0.91
HDAC3-212ENST00000492407 SNIP1Q8TAD8 396 aaKnown RBP9.35□□□□□ -0.91
HDAC3-212ENST00000492407 BAP1Q92560 729 aa9.35□□□□□ -0.91
HDAC3-212ENST00000492407 UBL7Q96S82 380 aaPredicted RBP9.35□□□□□ -0.91
HDAC3-212ENST00000492407 HAPLN3Q96S86 360 aa9.35□□□□□ -0.91
HDAC3-212ENST00000492407 CRACR2AQ9BSW2 395 aa9.35□□□□□ -0.91
HDAC3-212ENST00000492407 TKTL2Q9H0I9 626 aa9.35□□□□□ -0.91
HDAC3-212ENST00000492407 MUC3BQ9H195 1237 aa9.35□□□□□ -0.91
HDAC3-212ENST00000492407 ACP6Q9NPH0 428 aa9.35□□□□□ -0.91
HDAC3-212ENST00000492407 DYRK4Q9NR20 520 aa9.35□□□□□ -0.91
HDAC3-212ENST00000492407 PIGVQ9NUD9 493 aa9.35□□□□□ -0.91
HDAC3-212ENST00000492407 DNAJC12Q9UKB3 198 aa9.35□□□□□ -0.91
HDAC3-212ENST00000492407 ADAMTS20P59510 1910 aa9.35□□□□□ -0.91
HDAC3-212ENST00000492407 BAHCC1Q9P281 2608 aa9.35□□□□□ -0.91
HDAC3-212ENST00000492407 PTPRBP23467 1997 aa9.34□□□□□ -0.91
HDAC3-212ENST00000492407 CABIN1Q9Y6J0 2220 aa9.34□□□□□ -0.91
HDAC3-212ENST00000492407 SYNJ2BP-COX16A0A087WUM0 186 aa9.34□□□□□ -0.91
HDAC3-212ENST00000492407 NEMP2A6NFY4 417 aa9.34□□□□□ -0.91
HDAC3-212ENST00000492407 EIF4E1BA6NMX2 242 aaKnown RBP9.34□□□□□ -0.91
HDAC3-212ENST00000492407 FOXN3O00409 490 aaPredicted RBP9.34□□□□□ -0.91
HDAC3-212ENST00000492407 PLK4O00444 970 aa9.34□□□□□ -0.91
HDAC3-212ENST00000492407 LZTS3O60299 673 aaPredicted RBP9.34□□□□□ -0.91
HDAC3-212ENST00000492407 LSM8O95777 96 aaKnown RBP9.34□□□□□ -0.91
HDAC3-212ENST00000492407 ERBB2P04626 1255 aa9.34□□□□□ -0.91
HDAC3-212ENST00000492407 THEGLP0DJG4 465 aa9.34□□□□□ -0.91
HDAC3-212ENST00000492407 ALPPL2P10696 532 aa9.34□□□□□ -0.91
HDAC3-212ENST00000492407 HNRNPA2B1P22626 353 aaKnown RBP9.34□□□□□ -0.91
HDAC3-212ENST00000492407 DGKAP23743 735 aa9.34□□□□□ -0.91
HDAC3-212ENST00000492407 ERCC5P28715 1186 aaPredicted RBP9.34□□□□□ -0.91
HDAC3-212ENST00000492407 ACTN2P35609 894 aa9.34□□□□□ -0.91
HDAC3-212ENST00000492407 ETFBP38117 255 aa9.34□□□□□ -0.91
HDAC3-212ENST00000492407 RECQLP46063 649 aaPredicted RBP9.34□□□□□ -0.91
HDAC3-212ENST00000492407 DUSP3P51452 185 aaPredicted RBP9.34□□□□□ -0.91
HDAC3-212ENST00000492407 TAS2R38P59533 333 aa9.34□□□□□ -0.91
HDAC3-212ENST00000492407 UBE2HP62256 183 aa9.34□□□□□ -0.91
HDAC3-212ENST00000492407 CENPCQ03188 943 aa9.34□□□□□ -0.91
HDAC3-212ENST00000492407 DEUP1Q05D60 604 aa9.34□□□□□ -0.91
HDAC3-212ENST00000492407 DNAJC3Q13217 504 aa9.34□□□□□ -0.91
HDAC3-212ENST00000492407 MAN2A1Q16706 1144 aa9.34□□□□□ -0.91
HDAC3-212ENST00000492407 ZNF284Q2VY69 593 aa9.34□□□□□ -0.91
HDAC3-212ENST00000492407 PTPN20Q4JDL3 420 aa9.34□□□□□ -0.91
HDAC3-212ENST00000492407 CCDC157Q569K6 752 aa9.34□□□□□ -0.91
HDAC3-212ENST00000492407 CT47A1Q5JQC4 288 aaPredicted RBP9.34□□□□□ -0.91
HDAC3-212ENST00000492407 HES3Q5TGS1 186 aa9.34□□□□□ -0.91
HDAC3-212ENST00000492407 KIAA1161Q6NSJ0 714 aa9.34□□□□□ -0.91
HDAC3-212ENST00000492407 GJB7Q6PEY0 223 aa9.34□□□□□ -0.91
HDAC3-212ENST00000492407 Q6ZVU0 165 aa9.34□□□□□ -0.91
HDAC3-212ENST00000492407 ERN2Q76MJ5 926 aaKnown RBP9.34□□□□□ -0.91
HDAC3-212ENST00000492407 BNIPLQ7Z465 357 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms