RNA–Protein interactions for RNA: ENST00000492234.5

AGAP3-223, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, human

TSL 4

Gene AGAP3, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AGAP3-223	ENST00000492234	FARP1	Q9Y4F1	1045 aa	Predicted RBP	13.43	□□□□□ -0.26
AGAP3-223	ENST00000492234	WDFY4	Q6ZS81	3184 aa		13.42	□□□□□ -0.26
AGAP3-223	ENST00000492234	TARSL2	A2RTX5	802 aa	Known RBP	13.42	□□□□□ -0.26
AGAP3-223	ENST00000492234	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	13.42	□□□□□ -0.26
AGAP3-223	ENST00000492234	SMAD6	O43541	496 aa	Known RBP	13.42	□□□□□ -0.26
AGAP3-223	ENST00000492234	ATP9B	O43861	1147 aa		13.42	□□□□□ -0.26
AGAP3-223	ENST00000492234	RNASEH1	O60930	286 aa	Known RBP	13.42	□□□□□ -0.26
AGAP3-223	ENST00000492234	SIN3B	O75182	1162 aa		13.42	□□□□□ -0.26
AGAP3-223	ENST00000492234	FTCD	O95954	541 aa		13.42	□□□□□ -0.26
AGAP3-223	ENST00000492234	ACADM	P11310	421 aa		13.42	□□□□□ -0.26
AGAP3-223	ENST00000492234	TDGF1	P13385	188 aa		13.42	□□□□□ -0.26
AGAP3-223	ENST00000492234	VAV1	P15498	845 aa		13.42	□□□□□ -0.26
AGAP3-223	ENST00000492234	GABRG2	P18507	467 aa		13.42	□□□□□ -0.26
AGAP3-223	ENST00000492234	HOXA6	P31267	233 aa		13.42	□□□□□ -0.26
AGAP3-223	ENST00000492234	RECQL	P46063	649 aa	Predicted RBP	13.42	□□□□□ -0.26
AGAP3-223	ENST00000492234	ARF5	P84085	180 aa		13.42	□□□□□ -0.26
AGAP3-223	ENST00000492234	CAMK2G	Q13555	558 aa	Predicted RBP	13.42	□□□□□ -0.26
AGAP3-223	ENST00000492234	C9orf64	Q5T6V5	341 aa		13.42	□□□□□ -0.26
AGAP3-223	ENST00000492234	KAZN	Q674X7	775 aa		13.42	□□□□□ -0.26
AGAP3-223	ENST00000492234	MFSD7	Q6UXD7	560 aa		13.42	□□□□□ -0.26
AGAP3-223	ENST00000492234	NT5DC3	Q86UY8	548 aa		13.42	□□□□□ -0.26
AGAP3-223	ENST00000492234	WDR5B	Q86VZ2	330 aa		13.42	□□□□□ -0.26
AGAP3-223	ENST00000492234	LONP2	Q86WA8	852 aa		13.42	□□□□□ -0.26
AGAP3-223	ENST00000492234	CACUL1	Q86Y37	369 aa		13.42	□□□□□ -0.26
AGAP3-223	ENST00000492234	ARHGAP12	Q8IWW6	846 aa		13.42	□□□□□ -0.26
AGAP3-223	ENST00000492234	TP53INP2	Q8IXH6	220 aa		13.42	□□□□□ -0.26
AGAP3-223	ENST00000492234	KATNAL2	Q8IYT4	538 aa		13.42	□□□□□ -0.26
AGAP3-223	ENST00000492234	STK40	Q8N2I9	435 aa		13.42	□□□□□ -0.26
AGAP3-223	ENST00000492234	NPW	Q8N729	165 aa		13.42	□□□□□ -0.26
AGAP3-223	ENST00000492234	UBL4B	Q8N7F7	174 aa		13.42	□□□□□ -0.26
AGAP3-223	ENST00000492234	LRRC57	Q8N9N7	239 aa		13.42	□□□□□ -0.26
AGAP3-223	ENST00000492234	PRCC	Q92733	491 aa	Predicted RBP	13.42	□□□□□ -0.26
AGAP3-223	ENST00000492234	PTPRN2	Q92932	1015 aa		13.42	□□□□□ -0.26
AGAP3-223	ENST00000492234	SIPA1	Q96FS4	1042 aa		13.42	□□□□□ -0.26
AGAP3-223	ENST00000492234	TNKS2	Q9H2K2	1166 aa		13.42	□□□□□ -0.26
AGAP3-223	ENST00000492234	SP110	Q9HB58	689 aa		13.42	□□□□□ -0.26
AGAP3-223	ENST00000492234	EBF1	Q9UH73	591 aa		13.42	□□□□□ -0.26
AGAP3-223	ENST00000492234	PACSIN2	Q9UNF0	486 aa	Predicted RBP	13.42	□□□□□ -0.26
AGAP3-223	ENST00000492234	HS3ST2	Q9Y278	367 aa		13.42	□□□□□ -0.26
AGAP3-223	ENST00000492234	FCF1	Q9Y324	198 aa	Known RBP	13.42	□□□□□ -0.26
AGAP3-223	ENST00000492234	PCDHA3	Q9Y5H8	950 aa		13.42	□□□□□ -0.26
AGAP3-223	ENST00000492234	CHD5	Q8TDI0	1954 aa		13.41	□□□□□ -0.26
AGAP3-223	ENST00000492234	CCDC66	A2RUB6	948 aa		13.41	□□□□□ -0.26
AGAP3-223	ENST00000492234	C3orf70	A6NLC5	250 aa	Predicted RBP	13.41	□□□□□ -0.26
AGAP3-223	ENST00000492234		J3KR12	359 aa		13.41	□□□□□ -0.26
AGAP3-223	ENST00000492234	APOL1	O14791	398 aa		13.41	□□□□□ -0.26
AGAP3-223	ENST00000492234	ZFX	P17010	805 aa	Predicted RBP	13.41	□□□□□ -0.26
AGAP3-223	ENST00000492234	NDUFV2	P19404	249 aa		13.41	□□□□□ -0.26
AGAP3-223	ENST00000492234	CTNNA2	P26232	953 aa		13.41	□□□□□ -0.26
AGAP3-223	ENST00000492234	CTNNA1	P35221	906 aa	Known RBP	13.41	□□□□□ -0.26
AGAP3-223	ENST00000492234	CETN2	P41208	172 aa		13.41	□□□□□ -0.26
AGAP3-223	ENST00000492234	MARCKSL1	P49006	195 aa		13.41	□□□□□ -0.26
AGAP3-223	ENST00000492234	SERPINH1	P50454	418 aa	Known RBP	13.41	□□□□□ -0.26
AGAP3-223	ENST00000492234	VASP	P50552	380 aa	Predicted RBP	13.41	□□□□□ -0.26
AGAP3-223	ENST00000492234	CLCN6	P51797	869 aa		13.41	□□□□□ -0.26
AGAP3-223	ENST00000492234	RWDD2B	P57060	319 aa		13.41	□□□□□ -0.26
AGAP3-223	ENST00000492234	DYNLT1	P63172	113 aa		13.41	□□□□□ -0.26
AGAP3-223	ENST00000492234	USP39	Q53GS9	565 aa	Known RBP	13.41	□□□□□ -0.26
AGAP3-223	ENST00000492234	AFMID	Q63HM1	303 aa		13.41	□□□□□ -0.26
AGAP3-223	ENST00000492234	NCBP2-AS2	Q69YL0	99 aa		13.41	□□□□□ -0.26
AGAP3-223	ENST00000492234	ZC3H14	Q6PJT7	736 aa	Known RBP	13.41	□□□□□ -0.26
AGAP3-223	ENST00000492234	SPOCD1	Q6ZMY3	1216 aa		13.41	□□□□□ -0.26
AGAP3-223	ENST00000492234	ARHGAP36	Q6ZRI8	547 aa		13.41	□□□□□ -0.26
AGAP3-223	ENST00000492234		Q6ZVU0	165 aa		13.41	□□□□□ -0.26
AGAP3-223	ENST00000492234	RASSF3	Q86WH2	238 aa		13.41	□□□□□ -0.26
AGAP3-223	ENST00000492234	RYBP	Q8N488	228 aa	Predicted RBP	13.41	□□□□□ -0.26
AGAP3-223	ENST00000492234	PQLC3	Q8N755	202 aa		13.41	□□□□□ -0.26
AGAP3-223	ENST00000492234	GANC	Q8TET4	914 aa		13.41	□□□□□ -0.26
AGAP3-223	ENST00000492234	FRS2	Q8WU20	508 aa		13.41	□□□□□ -0.26
AGAP3-223	ENST00000492234	RLN3	Q8WXF3	142 aa		13.41	□□□□□ -0.26
AGAP3-223	ENST00000492234	FAF2	Q96CS3	445 aa		13.41	□□□□□ -0.26
AGAP3-223	ENST00000492234	RBM41	Q96IZ5	413 aa	Known RBP	13.41	□□□□□ -0.26
AGAP3-223	ENST00000492234	MRGPRX1	Q96LB2	322 aa		13.41	□□□□□ -0.26
AGAP3-223	ENST00000492234	CCDC114	Q96M63	670 aa		13.41	□□□□□ -0.26
AGAP3-223	ENST00000492234	ALS2CR12	Q96Q35	445 aa		13.41	□□□□□ -0.26
AGAP3-223	ENST00000492234	MKRN2	Q9H000	416 aa	Known RBP	13.41	□□□□□ -0.26
AGAP3-223	ENST00000492234	FAM86C1	Q9NVL1	165 aa		13.41	□□□□□ -0.26
AGAP3-223	ENST00000492234	TRMT1	Q9NXH9	659 aa	Known RBP	13.41	□□□□□ -0.26
AGAP3-223	ENST00000492234	UBA2	Q9UBT2	640 aa	Predicted RBP	13.41	□□□□□ -0.26
AGAP3-223	ENST00000492234	IPO11	Q9UI26	975 aa	Known RBP	13.41	□□□□□ -0.26
AGAP3-223	ENST00000492234	CAPN6	Q9Y6Q1	641 aa		13.41	□□□□□ -0.26
AGAP3-223	ENST00000492234		R4GN57	208 aa		13.41	□□□□□ -0.26
AGAP3-223	ENST00000492234	SDK1	Q7Z5N4	2213 aa		13.41	□□□□□ -0.26
AGAP3-223	ENST00000492234	CKAP5	Q14008	2032 aa		13.4	□□□□□ -0.26
AGAP3-223	ENST00000492234	CCDC163	A0A0D9SF12	145 aa		13.4	□□□□□ -0.26
AGAP3-223	ENST00000492234	ZSCAN12	O43309	604 aa		13.4	□□□□□ -0.26
AGAP3-223	ENST00000492234	PRAMEF11	O60813	436 aa		13.4	□□□□□ -0.26
AGAP3-223	ENST00000492234	MAP3K6	O95382	1288 aa		13.4	□□□□□ -0.26
AGAP3-223	ENST00000492234	CD160	O95971	181 aa		13.4	□□□□□ -0.26
AGAP3-223	ENST00000492234	DNTT	P04053	509 aa		13.4	□□□□□ -0.26
AGAP3-223	ENST00000492234	KRT10	P13645	584 aa		13.4	□□□□□ -0.26
AGAP3-223	ENST00000492234	COPA	P53621	1224 aa		13.4	□□□□□ -0.26
AGAP3-223	ENST00000492234	SRSF5	Q13243	272 aa	Known RBP	13.4	□□□□□ -0.26
AGAP3-223	ENST00000492234	BYSL	Q13895	437 aa	Known RBP	13.4	□□□□□ -0.26
AGAP3-223	ENST00000492234	TFDP2	Q14188	446 aa		13.4	□□□□□ -0.26
AGAP3-223	ENST00000492234	PAFAH1B3	Q15102	231 aa	Known RBP	13.4	□□□□□ -0.26
AGAP3-223	ENST00000492234	ZNF776	Q68DI1	518 aa	Predicted RBP	13.4	□□□□□ -0.26
AGAP3-223	ENST00000492234	C22orf39	Q6P5X5	142 aa		13.4	□□□□□ -0.26
AGAP3-223	ENST00000492234	ZNF662	Q6ZS27	426 aa		13.4	□□□□□ -0.26
AGAP3-223	ENST00000492234	CEP68	Q76N32	757 aa		13.4	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms