RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 SEMA3AQ14563 771 aa4.23□□□□□ -1.73
VTA1-204ENST00000491881 TRIP6Q15654 476 aaKnown RBP4.23□□□□□ -1.73
VTA1-204ENST00000491881 PLK5Q496M5 336 aa4.23□□□□□ -1.73
VTA1-204ENST00000491881 Q4G0T1 1027 aa4.23□□□□□ -1.73
VTA1-204ENST00000491881 MIDNQ504T8 468 aa4.23□□□□□ -1.73
VTA1-204ENST00000491881 TTC39AQ5SRH9 613 aa4.23□□□□□ -1.73
VTA1-204ENST00000491881 INTS11Q5TA45 600 aaKnown RBP4.23□□□□□ -1.73
VTA1-204ENST00000491881 VWA5B1Q5TIE3 1220 aa4.23□□□□□ -1.73
VTA1-204ENST00000491881 MORN5Q5VZ52 161 aa4.23□□□□□ -1.73
VTA1-204ENST00000491881 TMEM268Q5VZI3 342 aa4.23□□□□□ -1.73
VTA1-204ENST00000491881 TTLL5Q6EMB2 1281 aa4.23□□□□□ -1.73
VTA1-204ENST00000491881 GJB7Q6PEY0 223 aa4.23□□□□□ -1.73
VTA1-204ENST00000491881 DEF8Q6ZN54 512 aa4.23□□□□□ -1.73
VTA1-204ENST00000491881 B4GALNT4Q76KP1 1039 aa4.23□□□□□ -1.73
VTA1-204ENST00000491881 TCP11L2Q8N4U5 519 aa4.23□□□□□ -1.73
VTA1-204ENST00000491881 RFWD2Q8NHY2 731 aa4.23□□□□□ -1.73
VTA1-204ENST00000491881 DENND1AQ8TEH3 1009 aa4.23□□□□□ -1.73
VTA1-204ENST00000491881 PPM1MQ96MI6 270 aa4.23□□□□□ -1.73
VTA1-204ENST00000491881 FRG2BQ96QU4 278 aa4.23□□□□□ -1.73
VTA1-204ENST00000491881 ZNF304Q9HCX3 659 aa4.23□□□□□ -1.73
VTA1-204ENST00000491881 UBN1Q9NPG3 1134 aa4.23□□□□□ -1.73
VTA1-204ENST00000491881 AGO2Q9UKV8 859 aaKnown RBP4.23□□□□□ -1.73
VTA1-204ENST00000491881 KIR2DS5A0A0G2JLQ3 304 aa4.22□□□□□ -1.73
VTA1-204ENST00000491881 OR6C68A6NDL8 312 aa4.22□□□□□ -1.73
VTA1-204ENST00000491881 FAM90A7PA6NKC0 464 aa4.22□□□□□ -1.73
VTA1-204ENST00000491881 A6NLC8 198 aa4.22□□□□□ -1.73
VTA1-204ENST00000491881 FAM90A22PA8MWA6 464 aa4.22□□□□□ -1.73
VTA1-204ENST00000491881 FAM90A12PA8MX19 464 aa4.22□□□□□ -1.73
VTA1-204ENST00000491881 FAM90A23PA8MXZ1 464 aa4.22□□□□□ -1.73
VTA1-204ENST00000491881 FOXO6A8MYZ6 492 aa4.22□□□□□ -1.73
VTA1-204ENST00000491881 KIR2DS3K7RE56 304 aa4.22□□□□□ -1.73
VTA1-204ENST00000491881 TULP3O75386 442 aa4.22□□□□□ -1.73
VTA1-204ENST00000491881 NEURL1O76050 574 aa4.22□□□□□ -1.73
VTA1-204ENST00000491881 LIFRP42702 1097 aa4.22□□□□□ -1.73
VTA1-204ENST00000491881 MTNR1AP48039 350 aa4.22□□□□□ -1.73
VTA1-204ENST00000491881 RPP30P78346 268 aaKnown RBP4.22□□□□□ -1.73
VTA1-204ENST00000491881 GAD2Q05329 585 aa4.22□□□□□ -1.73
VTA1-204ENST00000491881 GALNT2Q10471 571 aa4.22□□□□□ -1.73
VTA1-204ENST00000491881 G3BP1Q13283 466 aaKnown RBP eCLIP4.22□□□□□ -1.734e-7■■□□□ 14.2
VTA1-204ENST00000491881 TDGQ13569 410 aa4.22□□□□□ -1.73
VTA1-204ENST00000491881 SHC4Q6S5L8 630 aa4.22□□□□□ -1.73
VTA1-204ENST00000491881 SLC22A25Q6T423 547 aa4.22□□□□□ -1.73
VTA1-204ENST00000491881 ZNF517Q6ZMY9 492 aaPredicted RBP4.22□□□□□ -1.73
VTA1-204ENST00000491881 DPP10Q8N608 796 aa4.22□□□□□ -1.73
VTA1-204ENST00000491881 SLC44A5Q8NCS7 719 aa4.22□□□□□ -1.73
VTA1-204ENST00000491881 LSM14AQ8ND56 463 aaKnown RBP4.22□□□□□ -1.73
VTA1-204ENST00000491881 DNAAF1Q8NEP3 725 aa4.22□□□□□ -1.73
VTA1-204ENST00000491881 FAR1Q8WVX9 515 aa4.22□□□□□ -1.73
VTA1-204ENST00000491881 CNOT9Q92600 299 aaKnown RBP4.22□□□□□ -1.73
VTA1-204ENST00000491881 TEFMQ96QE5 360 aaKnown RBP4.22□□□□□ -1.73
VTA1-204ENST00000491881 EYA3Q99504 573 aa4.22□□□□□ -1.73
VTA1-204ENST00000491881 SLC26A6Q9BXS9 759 aa4.22□□□□□ -1.73
VTA1-204ENST00000491881 FRMD8Q9BZ67 464 aaPredicted RBP4.22□□□□□ -1.73
VTA1-204ENST00000491881 HIPK3Q9H422 1215 aa4.22□□□□□ -1.73
VTA1-204ENST00000491881 EPHX3Q9H6B9 360 aa4.22□□□□□ -1.73
VTA1-204ENST00000491881 THSD1Q9NS62 852 aa4.22□□□□□ -1.73
VTA1-204ENST00000491881 TRNAU1APQ9NX07 287 aaKnown RBP4.22□□□□□ -1.73
VTA1-204ENST00000491881 ANAPC4Q9UJX5 808 aa4.22□□□□□ -1.73
VTA1-204ENST00000491881 OSGIN2Q9Y236 505 aa4.22□□□□□ -1.73
VTA1-204ENST00000491881 TRBV5-3A0A0A0MS03 114 aa4.21□□□□□ -1.74
VTA1-204ENST00000491881 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.21□□□□□ -1.74
VTA1-204ENST00000491881 TLR2O60603 784 aa4.21□□□□□ -1.74
VTA1-204ENST00000491881 NTN1O95631 604 aa4.21□□□□□ -1.74
VTA1-204ENST00000491881 DDAH2O95865 285 aa4.21□□□□□ -1.74
VTA1-204ENST00000491881 IL1AP01583 271 aa4.21□□□□□ -1.74
VTA1-204ENST00000491881 WNT1P04628 370 aa4.21□□□□□ -1.74
VTA1-204ENST00000491881 CHRM4P08173 479 aa4.21□□□□□ -1.74
VTA1-204ENST00000491881 HOXD9P28356 352 aaPredicted RBP4.21□□□□□ -1.74
VTA1-204ENST00000491881 TKTP29401 623 aaKnown RBP4.21□□□□□ -1.74
VTA1-204ENST00000491881 CCKBRP32239 447 aa4.21□□□□□ -1.74
VTA1-204ENST00000491881 KRT9P35527 623 aa4.21□□□□□ -1.74
VTA1-204ENST00000491881 SLC16A2P36021 539 aa4.21□□□□□ -1.74
VTA1-204ENST00000491881 PAFAH1B1P43034 410 aa4.21□□□□□ -1.74
VTA1-204ENST00000491881 TUBP50607 506 aa4.21□□□□□ -1.74
VTA1-204ENST00000491881 SLC18A3Q16572 532 aa4.21□□□□□ -1.74
VTA1-204ENST00000491881 SLC4A8Q2Y0W8 1093 aa4.21□□□□□ -1.74
VTA1-204ENST00000491881 C6orf10Q5SRN2 563 aa4.21□□□□□ -1.74
VTA1-204ENST00000491881 C10orf25Q5T742 122 aa4.21□□□□□ -1.74
VTA1-204ENST00000491881 RUSC1-AS1Q66K80 236 aa4.21□□□□□ -1.74
VTA1-204ENST00000491881 NAPEPLDQ6IQ20 393 aa4.21□□□□□ -1.74
VTA1-204ENST00000491881 HMBOX1Q6NT76 420 aa4.21□□□□□ -1.74
VTA1-204ENST00000491881 AAGABQ6PD74 315 aa4.21□□□□□ -1.74
VTA1-204ENST00000491881 FAM185AQ8N0U4 392 aa4.21□□□□□ -1.74
VTA1-204ENST00000491881 SLC25A41Q8N5S1 370 aa4.21□□□□□ -1.74
VTA1-204ENST00000491881 NANOGP1Q8N7R0 232 aa4.21□□□□□ -1.74
VTA1-204ENST00000491881 TEX19Q8NA77 164 aa4.21□□□□□ -1.74
VTA1-204ENST00000491881 CMASQ8NFW8 434 aaPredicted RBP4.21□□□□□ -1.74
VTA1-204ENST00000491881 TNIP2Q8NFZ5 429 aa4.21□□□□□ -1.74
VTA1-204ENST00000491881 PIGOQ8TEQ8 1089 aa4.21□□□□□ -1.74
VTA1-204ENST00000491881 RAB40AQ8WXH6 277 aa4.21□□□□□ -1.74
VTA1-204ENST00000491881 ST8SIA4Q92187 359 aa4.21□□□□□ -1.74
VTA1-204ENST00000491881 HSPH1Q92598 858 aa4.21□□□□□ -1.74
VTA1-204ENST00000491881 CENPIQ92674 756 aaPredicted RBP4.21□□□□□ -1.74
VTA1-204ENST00000491881 EME1Q96AY2 570 aa4.21□□□□□ -1.74
VTA1-204ENST00000491881 RRP36Q96EU6 259 aaKnown RBP4.21□□□□□ -1.74
VTA1-204ENST00000491881 APOPT1Q96IL0 206 aa4.21□□□□□ -1.74
VTA1-204ENST00000491881 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.21□□□□□ -1.74
VTA1-204ENST00000491881 PHF7Q9BWX1 381 aaPredicted RBP4.21□□□□□ -1.74
VTA1-204ENST00000491881 INTS2Q9H0H0 1204 aaKnown RBP4.21□□□□□ -1.74
VTA1-204ENST00000491881 LMAN2LQ9H0V9 348 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms