RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 PPARGC1AQ9UBK2 798 aaKnown RBP15.42■□□□□ 0.06
CDC42SE1-205ENST00000491825 VANGL2Q9ULK5 521 aa15.42■□□□□ 0.06
CDC42SE1-205ENST00000491825 NEU3Q9UQ49 428 aa15.42■□□□□ 0.06
CDC42SE1-205ENST00000491825 ADGRG1Q9Y653 693 aa15.42■□□□□ 0.06
CDC42SE1-205ENST00000491825 AKAP13Q12802 2813 aa15.41■□□□□ 0.06
CDC42SE1-205ENST00000491825 DRGXA6NNA5 263 aa15.41■□□□□ 0.06
CDC42SE1-205ENST00000491825 METTL12A8MUP2 240 aa15.41■□□□□ 0.06
CDC42SE1-205ENST00000491825 MEI4A8MW99 385 aa15.41■□□□□ 0.06
CDC42SE1-205ENST00000491825 E9PAM4 449 aa15.41■□□□□ 0.06
CDC42SE1-205ENST00000491825 TBL1XO60907 577 aa15.41■□□□□ 0.06
CDC42SE1-205ENST00000491825 GNSP15586 552 aa15.41■□□□□ 0.06
CDC42SE1-205ENST00000491825 OXTRP30559 389 aa15.41■□□□□ 0.06
CDC42SE1-205ENST00000491825 L1CAMP32004 1257 aa15.41■□□□□ 0.06
CDC42SE1-205ENST00000491825 HTR7P34969 479 aa15.41■□□□□ 0.06
CDC42SE1-205ENST00000491825 GGCXP38435 758 aa15.41■□□□□ 0.06
CDC42SE1-205ENST00000491825 ZNF135P52742 658 aaPredicted RBP15.41■□□□□ 0.06
CDC42SE1-205ENST00000491825 CCDC173Q0VFZ6 552 aa15.41■□□□□ 0.06
CDC42SE1-205ENST00000491825 C11orf63Q6NUN7 778 aa15.41■□□□□ 0.06
CDC42SE1-205ENST00000491825 LRRC31Q6UY01 552 aa15.41■□□□□ 0.06
CDC42SE1-205ENST00000491825 CHST9Q7L1S5 443 aa15.41■□□□□ 0.06
CDC42SE1-205ENST00000491825 KIAA1328Q86T90 577 aa15.41■□□□□ 0.06
CDC42SE1-205ENST00000491825 CACUL1Q86Y37 369 aa15.41■□□□□ 0.06
CDC42SE1-205ENST00000491825 ZCCHC9Q8N567 271 aaKnown RBP15.41■□□□□ 0.06
CDC42SE1-205ENST00000491825 OR2T3Q8NH03 318 aa15.41■□□□□ 0.06
CDC42SE1-205ENST00000491825 CYB5D2Q8WUJ1 264 aa15.41■□□□□ 0.06
CDC42SE1-205ENST00000491825 TEKT4Q8WW24 435 aa15.41■□□□□ 0.06
CDC42SE1-205ENST00000491825 LMLNQ96KR4 655 aa15.41■□□□□ 0.06
CDC42SE1-205ENST00000491825 RPRD1AQ96P16 312 aaPredicted RBP15.41■□□□□ 0.06
CDC42SE1-205ENST00000491825 SNRNP25Q9BV90 132 aaKnown RBP15.41■□□□□ 0.06
CDC42SE1-205ENST00000491825 LACRTQ9GZZ8 138 aa15.41■□□□□ 0.06
CDC42SE1-205ENST00000491825 SIK2Q9H0K1 926 aa15.41■□□□□ 0.06
CDC42SE1-205ENST00000491825 RETREG1Q9H6L5 497 aa15.41■□□□□ 0.06
CDC42SE1-205ENST00000491825 OR12D3Q9UGF7 316 aa15.41■□□□□ 0.06
CDC42SE1-205ENST00000491825 GGA2Q9UJY4 613 aa15.41■□□□□ 0.06
CDC42SE1-205ENST00000491825 TFR2Q9UP52 801 aa15.41■□□□□ 0.06
CDC42SE1-205ENST00000491825 AP4E1Q9UPM8 1137 aa15.41■□□□□ 0.06
CDC42SE1-205ENST00000491825 NEUROG3Q9Y4Z2 214 aa15.41■□□□□ 0.06
CDC42SE1-205ENST00000491825 PI4KAP42356 2102 aa15.41■□□□□ 0.06
CDC42SE1-205ENST00000491825 CKAP5Q14008 2032 aa15.41■□□□□ 0.06
CDC42SE1-205ENST00000491825 A0A1B0GTW7 788 aa15.4■□□□□ 0.06
CDC42SE1-205ENST00000491825 CLDN11O75508 207 aa15.4■□□□□ 0.06
CDC42SE1-205ENST00000491825 LUC7L3O95232 432 aaKnown RBP15.4■□□□□ 0.06
CDC42SE1-205ENST00000491825 PABPC1P11940 636 aaKnown RBP15.4■□□□□ 0.06
CDC42SE1-205ENST00000491825 IL1R2P27930 398 aa15.4■□□□□ 0.06
CDC42SE1-205ENST00000491825 SLC1A1P43005 524 aa15.4■□□□□ 0.06
CDC42SE1-205ENST00000491825 BNC1Q01954 994 aa15.4■□□□□ 0.06
CDC42SE1-205ENST00000491825 KIF5AQ12840 1032 aa15.4■□□□□ 0.06
CDC42SE1-205ENST00000491825 HADHQ16836 314 aaKnown RBP15.4■□□□□ 0.06
CDC42SE1-205ENST00000491825 BOLA3Q53S33 107 aa15.4■□□□□ 0.06
CDC42SE1-205ENST00000491825 ERMARDQ5T6L9 678 aa15.4■□□□□ 0.06
CDC42SE1-205ENST00000491825 DCAF12L1Q5VU92 463 aa15.4■□□□□ 0.06
CDC42SE1-205ENST00000491825 ZNF662Q6ZS27 426 aa15.4■□□□□ 0.06
CDC42SE1-205ENST00000491825 POLNQ7Z5Q5 900 aa15.4■□□□□ 0.06
CDC42SE1-205ENST00000491825 C14orf80Q86SX3 495 aa15.4■□□□□ 0.06
CDC42SE1-205ENST00000491825 MFN1Q8IWA4 741 aa15.4■□□□□ 0.06
CDC42SE1-205ENST00000491825 AHI1Q8N157 1196 aa15.4■□□□□ 0.06
CDC42SE1-205ENST00000491825 ZNF366Q8N895 744 aa15.4■□□□□ 0.06
CDC42SE1-205ENST00000491825 IGSF8Q969P0 613 aa15.4■□□□□ 0.06
CDC42SE1-205ENST00000491825 CAMK1GQ96NX5 476 aa15.4■□□□□ 0.06
CDC42SE1-205ENST00000491825 PPP1R9BQ96SB3 815 aa15.4■□□□□ 0.06
CDC42SE1-205ENST00000491825 TSGA10Q9BZW7 698 aa15.4■□□□□ 0.06
CDC42SE1-205ENST00000491825 ZDHHC5Q9C0B5 715 aa15.4■□□□□ 0.06
CDC42SE1-205ENST00000491825 ZYG11BQ9C0D3 744 aa15.4■□□□□ 0.06
CDC42SE1-205ENST00000491825 SALL4Q9UJQ4 1053 aa15.4■□□□□ 0.06
CDC42SE1-205ENST00000491825 KLK13Q9UKR3 277 aa15.4■□□□□ 0.06
CDC42SE1-205ENST00000491825 ZMIZ1Q9ULJ6 1067 aa15.4■□□□□ 0.06
CDC42SE1-205ENST00000491825 SLCO1B1Q9Y6L6 691 aa15.4■□□□□ 0.06
CDC42SE1-205ENST00000491825 TMEM8BA6NDV4 472 aa15.39■□□□□ 0.05
CDC42SE1-205ENST00000491825 SH3BP5O60239 455 aa15.39■□□□□ 0.05
CDC42SE1-205ENST00000491825 LRIG2O94898 1065 aa15.39■□□□□ 0.05
CDC42SE1-205ENST00000491825 DLDP09622 509 aaKnown RBP15.39■□□□□ 0.05
CDC42SE1-205ENST00000491825 CCDC175P0C221 793 aa15.39■□□□□ 0.05
CDC42SE1-205ENST00000491825 ACADMP11310 421 aa15.39■□□□□ 0.05
CDC42SE1-205ENST00000491825 TCF4P15884 667 aa15.39■□□□□ 0.05
CDC42SE1-205ENST00000491825 CD70P32970 193 aa15.39■□□□□ 0.05
CDC42SE1-205ENST00000491825 CDH4P55283 916 aa15.39■□□□□ 0.05
CDC42SE1-205ENST00000491825 CDH18Q13634 790 aa15.39■□□□□ 0.05
CDC42SE1-205ENST00000491825 HNRNPDQ14103 355 aaKnown RBP15.39■□□□□ 0.05
CDC42SE1-205ENST00000491825 MESDQ14696 234 aa15.39■□□□□ 0.05
CDC42SE1-205ENST00000491825 DPYSL2Q16555 572 aa15.39■□□□□ 0.05
CDC42SE1-205ENST00000491825 MBLAC2Q68D91 279 aa15.39■□□□□ 0.05
CDC42SE1-205ENST00000491825 CCAR2Q8N163 923 aaKnown RBP15.39■□□□□ 0.05
CDC42SE1-205ENST00000491825 CFAP52Q8N1V2 620 aa15.39■□□□□ 0.05
CDC42SE1-205ENST00000491825 FIBINQ8TAL6 211 aa15.39■□□□□ 0.05
CDC42SE1-205ENST00000491825 MYO19Q96H55 970 aa15.39■□□□□ 0.05
CDC42SE1-205ENST00000491825 EPAS1Q99814 870 aa15.39■□□□□ 0.05
CDC42SE1-205ENST00000491825 PCED1AQ9H1Q7 454 aa15.39■□□□□ 0.05
CDC42SE1-205ENST00000491825 ZNF212Q9UDV6 495 aa15.39■□□□□ 0.05
CDC42SE1-205ENST00000491825 PCSK1NQ9UHG2 260 aa15.39■□□□□ 0.05
CDC42SE1-205ENST00000491825 TBC1D30Q9Y2I9 924 aa15.39■□□□□ 0.05
CDC42SE1-205ENST00000491825 MSRB2Q9Y3D2 182 aa15.39■□□□□ 0.05
CDC42SE1-205ENST00000491825 SNX10Q9Y5X0 201 aa15.39■□□□□ 0.05
CDC42SE1-205ENST00000491825 LAMA5O15230 3695 aa15.38■□□□□ 0.05
CDC42SE1-205ENST00000491825 FAM221BA6H8Z2 402 aa15.38■□□□□ 0.05
CDC42SE1-205ENST00000491825 FAM72CH0Y354 149 aa15.38■□□□□ 0.05
CDC42SE1-205ENST00000491825 H0Y626 953 aa15.38■□□□□ 0.05
CDC42SE1-205ENST00000491825 BUB1BO60566 1050 aaPredicted RBP15.38■□□□□ 0.05
CDC42SE1-205ENST00000491825 CBFA2T3O75081 653 aa15.38■□□□□ 0.05
CDC42SE1-205ENST00000491825 TRIM16O95361 564 aa15.38■□□□□ 0.05
CDC42SE1-205ENST00000491825 PTMAP06454 111 aaKnown RBP15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms