RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 VPS28Q9UK41 221 aa13.02□□□□□ -0.33
SEC61A1-206ENST00000491668 FZD4Q9ULV1 537 aa13.02□□□□□ -0.33
SEC61A1-206ENST00000491668 SCML1Q9UN30 329 aa13.02□□□□□ -0.33
SEC61A1-206ENST00000491668 ZFHX4Q86UP3 3567 aa13.02□□□□□ -0.33
SEC61A1-206ENST00000491668 TMEM131Q92545 1883 aa13.02□□□□□ -0.33
SEC61A1-206ENST00000491668 SSU72P8A0A1W2PR75 194 aa13.01□□□□□ -0.33
SEC61A1-206ENST00000491668 FAM47DPA6NHR8 397 aa13.01□□□□□ -0.33
SEC61A1-206ENST00000491668 C2CD4BA6NLJ0 364 aa13.01□□□□□ -0.33
SEC61A1-206ENST00000491668 E9PAM4 449 aa13.01□□□□□ -0.33
SEC61A1-206ENST00000491668 RNASEH1O60930 286 aaKnown RBP13.01□□□□□ -0.33
SEC61A1-206ENST00000491668 CBFA2T3O75081 653 aa13.01□□□□□ -0.33
SEC61A1-206ENST00000491668 RNASEH2AO75792 299 aaKnown RBP13.01□□□□□ -0.33
SEC61A1-206ENST00000491668 SRCP12931 536 aa13.01□□□□□ -0.33
SEC61A1-206ENST00000491668 GOT1P17174 413 aa13.01□□□□□ -0.33
SEC61A1-206ENST00000491668 C5AR1P21730 350 aa13.01□□□□□ -0.33
SEC61A1-206ENST00000491668 GLDCP23378 1020 aa13.01□□□□□ -0.33
SEC61A1-206ENST00000491668 RDXP35241 583 aaKnown RBP13.01□□□□□ -0.33
SEC61A1-206ENST00000491668 AFF3P51826 1226 aaKnown RBP13.01□□□□□ -0.33
SEC61A1-206ENST00000491668 ADPRHP54922 357 aa13.01□□□□□ -0.33
SEC61A1-206ENST00000491668 OXCT1P55809 520 aa13.01□□□□□ -0.33
SEC61A1-206ENST00000491668 SIM1P81133 766 aaPredicted RBP13.01□□□□□ -0.33
SEC61A1-206ENST00000491668 ATP11AP98196 1134 aa13.01□□□□□ -0.33
SEC61A1-206ENST00000491668 FOXC1Q12948 553 aa13.01□□□□□ -0.33
SEC61A1-206ENST00000491668 SLC14A1Q13336 389 aa13.01□□□□□ -0.33
SEC61A1-206ENST00000491668 DLG2Q15700 870 aa13.01□□□□□ -0.33
SEC61A1-206ENST00000491668 C15orf59Q2T9L4 293 aaPredicted RBP13.01□□□□□ -0.33
SEC61A1-206ENST00000491668 WDR59Q6PJI9 974 aa13.01□□□□□ -0.33
SEC61A1-206ENST00000491668 Q6ZVU0 165 aa13.01□□□□□ -0.33
SEC61A1-206ENST00000491668 TFAP2DQ7Z6R9 452 aa13.01□□□□□ -0.33
SEC61A1-206ENST00000491668 SH2D3CQ8N5H7 860 aa13.01□□□□□ -0.33
SEC61A1-206ENST00000491668 GANCQ8TET4 914 aa13.01□□□□□ -0.33
SEC61A1-206ENST00000491668 RXFP2Q8WXD0 754 aa13.01□□□□□ -0.33
SEC61A1-206ENST00000491668 CENPIQ92674 756 aaPredicted RBP13.01□□□□□ -0.33
SEC61A1-206ENST00000491668 HAPLN3Q96S86 360 aa13.01□□□□□ -0.33
SEC61A1-206ENST00000491668 BAG1Q99933 345 aaPredicted RBP13.01□□□□□ -0.33
SEC61A1-206ENST00000491668 SYT11Q9BT88 431 aa13.01□□□□□ -0.33
SEC61A1-206ENST00000491668 TMEM121BQ9BXQ6 578 aaPredicted RBP13.01□□□□□ -0.33
SEC61A1-206ENST00000491668 GAREM1Q9H706 876 aa13.01□□□□□ -0.33
SEC61A1-206ENST00000491668 NHEJ1Q9H9Q4 299 aaPredicted RBP13.01□□□□□ -0.33
SEC61A1-206ENST00000491668 VPS51Q9UID3 782 aa13.01□□□□□ -0.33
SEC61A1-206ENST00000491668 PPM1HQ9ULR3 514 aa13.01□□□□□ -0.33
SEC61A1-206ENST00000491668 NEU3Q9UQ49 428 aa13.01□□□□□ -0.33
SEC61A1-206ENST00000491668 HS3ST2Q9Y278 367 aa13.01□□□□□ -0.33
SEC61A1-206ENST00000491668 SNX11Q9Y5W9 270 aa13.01□□□□□ -0.33
SEC61A1-206ENST00000491668 TCRBV5S1A1TA0A578 114 aa13□□□□□ -0.33
SEC61A1-206ENST00000491668 FAM72CH0Y354 149 aa13□□□□□ -0.33
SEC61A1-206ENST00000491668 KCNK3O14649 394 aa13□□□□□ -0.33
SEC61A1-206ENST00000491668 SMAD6O43541 496 aaKnown RBP13□□□□□ -0.33
SEC61A1-206ENST00000491668 ZNF821O75541 412 aaPredicted RBP13□□□□□ -0.33
SEC61A1-206ENST00000491668 ZMPSTE24O75844 475 aa13□□□□□ -0.33
SEC61A1-206ENST00000491668 IPO7O95373 1038 aaKnown RBP13□□□□□ -0.33
SEC61A1-206ENST00000491668 ADH1BP00325 375 aa13□□□□□ -0.33
SEC61A1-206ENST00000491668 IL1BP01584 269 aa13□□□□□ -0.33
SEC61A1-206ENST00000491668 WNT1P04628 370 aa13□□□□□ -0.33
SEC61A1-206ENST00000491668 CTSLP07711 333 aa13□□□□□ -0.33
SEC61A1-206ENST00000491668 RFC1P35251 1148 aaPredicted RBP13□□□□□ -0.33
SEC61A1-206ENST00000491668 CYLC1P35663 651 aaPredicted RBP13□□□□□ -0.33
SEC61A1-206ENST00000491668 GRIA4P48058 902 aa13□□□□□ -0.33
SEC61A1-206ENST00000491668 HDAC4P56524 1084 aa13□□□□□ -0.33
SEC61A1-206ENST00000491668 PPP2CBP62714 309 aa13□□□□□ -0.33
SEC61A1-206ENST00000491668 PPP2CAP67775 309 aa13□□□□□ -0.33
SEC61A1-206ENST00000491668 CCDC122Q5T0U0 273 aa13□□□□□ -0.33
SEC61A1-206ENST00000491668 FAM72AQ5TYM5 149 aa13□□□□□ -0.33
SEC61A1-206ENST00000491668 MANEALQ5VSG8 457 aa13□□□□□ -0.33
SEC61A1-206ENST00000491668 FAM72DQ6L9T8 149 aa13□□□□□ -0.33
SEC61A1-206ENST00000491668 LINGO4Q6UY18 593 aa13□□□□□ -0.33
SEC61A1-206ENST00000491668 DBX2Q6ZNG2 339 aa13□□□□□ -0.33
SEC61A1-206ENST00000491668 SND1Q7KZF4 910 aaKnown RBP eCLIP13□□□□□ -0.33
SEC61A1-206ENST00000491668 FAM72BQ86X60 149 aa13□□□□□ -0.33
SEC61A1-206ENST00000491668 PHF13Q86YI8 300 aaPredicted RBP13□□□□□ -0.33
SEC61A1-206ENST00000491668 TMTC1Q8IUR5 882 aa13□□□□□ -0.33
SEC61A1-206ENST00000491668 NAXDQ8IW45 347 aa13□□□□□ -0.33
SEC61A1-206ENST00000491668 OR7D4Q8NG98 312 aa13□□□□□ -0.33
SEC61A1-206ENST00000491668 OR2T34Q8NGX1 318 aa13□□□□□ -0.33
SEC61A1-206ENST00000491668 SLC6A18Q96N87 628 aa13□□□□□ -0.33
SEC61A1-206ENST00000491668 CHP1Q99653 195 aa13□□□□□ -0.33
SEC61A1-206ENST00000491668 OMDQ99983 421 aa13□□□□□ -0.33
SEC61A1-206ENST00000491668 MUC3BQ9H195 1237 aa13□□□□□ -0.33
SEC61A1-206ENST00000491668 SLC32A1Q9H598 525 aa13□□□□□ -0.33
SEC61A1-206ENST00000491668 ADAM22Q9P0K1 906 aa13□□□□□ -0.33
SEC61A1-206ENST00000491668 NCKAP1Q9Y2A7 1128 aa13□□□□□ -0.33
SEC61A1-206ENST00000491668 ANKRD6Q9Y2G4 727 aa13□□□□□ -0.33
SEC61A1-206ENST00000491668 ITPR1Q14643 2758 aa13□□□□□ -0.33
SEC61A1-206ENST00000491668 DOCK9Q9BZ29 2069 aa13□□□□□ -0.33
SEC61A1-206ENST00000491668 A0A1W2PPC4 97 aa12.99□□□□□ -0.33
SEC61A1-206ENST00000491668 DDX3XO00571 662 aaKnown RBP eCLIP12.99□□□□□ -0.333e-15■■■■■ 28.1
SEC61A1-206ENST00000491668 MCF2LO15068 1137 aa12.99□□□□□ -0.33
SEC61A1-206ENST00000491668 SRGAP2O75044 1071 aa12.99□□□□□ -0.33
SEC61A1-206ENST00000491668 RTN2O75298 545 aa12.99□□□□□ -0.33
SEC61A1-206ENST00000491668 CALB1P05937 261 aa12.99□□□□□ -0.33
SEC61A1-206ENST00000491668 RHOCP08134 193 aa12.99□□□□□ -0.33
SEC61A1-206ENST00000491668 ZNF883P0CG24 379 aa12.99□□□□□ -0.33
SEC61A1-206ENST00000491668 RRM1P23921 792 aa12.99□□□□□ -0.33
SEC61A1-206ENST00000491668 ADRA1BP35368 520 aa12.99□□□□□ -0.33
SEC61A1-206ENST00000491668 NNMTP40261 264 aa12.99□□□□□ -0.33
SEC61A1-206ENST00000491668 CTSKP43235 329 aa12.99□□□□□ -0.33
SEC61A1-206ENST00000491668 PTPN9P43378 593 aa12.99□□□□□ -0.33
SEC61A1-206ENST00000491668 GSCP56915 257 aaPredicted RBP12.99□□□□□ -0.33
SEC61A1-206ENST00000491668 TAS2R38P59533 333 aa12.99□□□□□ -0.33
SEC61A1-206ENST00000491668 CCDC173Q0VFZ6 552 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms