RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 TBC1D3CQ6IPX1 549 aa4.29□□□□□ -1.72
PHC3-213ENST00000491258 TRABD2AQ86V40 505 aa4.29□□□□□ -1.72
PHC3-213ENST00000491258 TBC1D3Q8IZP1 549 aaPredicted RBP4.29□□□□□ -1.72
PHC3-213ENST00000491258 CEP76Q8TAP6 659 aa4.29□□□□□ -1.72
PHC3-213ENST00000491258 FAM110DQ8TAY7 271 aaPredicted RBP4.29□□□□□ -1.72
PHC3-213ENST00000491258 SLC35F5Q8WV83 523 aa4.29□□□□□ -1.72
PHC3-213ENST00000491258 ZNF333Q96JL9 665 aa4.29□□□□□ -1.72
PHC3-213ENST00000491258 GFM1Q96RP9 751 aaKnown RBP4.29□□□□□ -1.72
PHC3-213ENST00000491258 GDF15Q99988 308 aa4.29□□□□□ -1.72
PHC3-213ENST00000491258 COLEC11Q9BWP8 271 aa4.29□□□□□ -1.72
PHC3-213ENST00000491258 TMEM120AQ9BXJ8 343 aa4.29□□□□□ -1.72
PHC3-213ENST00000491258 HIPK3Q9H422 1215 aa4.29□□□□□ -1.72
PHC3-213ENST00000491258 CCDC134Q9H6E4 229 aa4.29□□□□□ -1.72
PHC3-213ENST00000491258 SRPRBQ9Y5M8 271 aaKnown RBP4.29□□□□□ -1.72
PHC3-213ENST00000491258 COPG1Q9Y678 874 aaKnown RBP4.29□□□□□ -1.72
PHC3-213ENST00000491258 IGLV5-52A0A0A0MRZ9 124 aa4.28□□□□□ -1.72
PHC3-213ENST00000491258 PCDH17O14917 1159 aa4.28□□□□□ -1.72
PHC3-213ENST00000491258 LMX1BO60663 402 aa4.28□□□□□ -1.72
PHC3-213ENST00000491258 SERPINI2O75830 405 aa4.28□□□□□ -1.72
PHC3-213ENST00000491258 CYP3A4P08684 503 aa4.28□□□□□ -1.72
PHC3-213ENST00000491258 C21orf33P30042 268 aaPredicted RBP4.28□□□□□ -1.72
PHC3-213ENST00000491258 FAM3BP58499 235 aaPredicted RBP4.28□□□□□ -1.72
PHC3-213ENST00000491258 RNASELQ05823 741 aaKnown RBP4.28□□□□□ -1.72
PHC3-213ENST00000491258 ARL13BQ3SXY8 428 aa4.28□□□□□ -1.72
PHC3-213ENST00000491258 SLC30A9Q6PML9 568 aa4.28□□□□□ -1.72
PHC3-213ENST00000491258 TMEM200AQ86VY9 491 aa4.28□□□□□ -1.72
PHC3-213ENST00000491258 CLEC4CQ8WTT0 213 aa4.28□□□□□ -1.72
PHC3-213ENST00000491258 JDP2Q8WYK2 163 aa4.28□□□□□ -1.72
PHC3-213ENST00000491258 MALT1Q9UDY8 824 aa4.28□□□□□ -1.72
PHC3-213ENST00000491258 ABCC10Q5T3U5 1492 aa4.28□□□□□ -1.72
PHC3-213ENST00000491258 ADAMTS12P58397 1594 aa4.27□□□□□ -1.73
PHC3-213ENST00000491258 SAA2-SAA4A0A096LPE2 208 aa4.27□□□□□ -1.73
PHC3-213ENST00000491258 TMCC1O94876 653 aa4.27□□□□□ -1.73
PHC3-213ENST00000491258 SOX30O94993 753 aa4.27□□□□□ -1.73
PHC3-213ENST00000491258 HARSP12081 509 aaKnown RBP4.27□□□□□ -1.73
PHC3-213ENST00000491258 UNGP13051 313 aaPredicted RBP4.27□□□□□ -1.73
PHC3-213ENST00000491258 PRIM2P49643 509 aa4.27□□□□□ -1.73
PHC3-213ENST00000491258 CDH12P55289 794 aa4.27□□□□□ -1.73
PHC3-213ENST00000491258 SNTA1Q13424 505 aa4.27□□□□□ -1.73
PHC3-213ENST00000491258 PMS2P11Q13670 270 aa4.27□□□□□ -1.73
PHC3-213ENST00000491258 STPG1Q5TH74 334 aa4.27□□□□□ -1.73
PHC3-213ENST00000491258 FAM171A1Q5VUB5 890 aa4.27□□□□□ -1.73
PHC3-213ENST00000491258 ADAM5Q6NVV9 412 aa4.27□□□□□ -1.73
PHC3-213ENST00000491258 MON1BQ7L1V2 547 aa4.27□□□□□ -1.73
PHC3-213ENST00000491258 C14orf80Q86SX3 495 aa4.27□□□□□ -1.73
PHC3-213ENST00000491258 LMNTD1Q8N9Z9 388 aa4.27□□□□□ -1.73
PHC3-213ENST00000491258 SPATA20Q8TB22 786 aa4.27□□□□□ -1.73
PHC3-213ENST00000491258 TIFAQ96CG3 184 aa4.27□□□□□ -1.73
PHC3-213ENST00000491258 ZDHHC7Q9NXF8 308 aa4.27□□□□□ -1.73
PHC3-213ENST00000491258 ZBTB1Q9Y2K1 713 aa4.27□□□□□ -1.73
PHC3-213ENST00000491258 RAI2Q9Y5P3 530 aa4.27□□□□□ -1.73
PHC3-213ENST00000491258 ITM2AO43736 263 aa4.26□□□□□ -1.73
PHC3-213ENST00000491258 RPP40O75818 363 aaKnown RBP4.26□□□□□ -1.73
PHC3-213ENST00000491258 NTSR2O95665 410 aa4.26□□□□□ -1.73
PHC3-213ENST00000491258 ANXA6P08133 673 aa4.26□□□□□ -1.73
PHC3-213ENST00000491258 AKT1P31749 480 aa4.26□□□□□ -1.73
PHC3-213ENST00000491258 ZNF569Q5MCW4 686 aa4.26□□□□□ -1.73
PHC3-213ENST00000491258 ZNF771Q7L3S4 317 aaPredicted RBP4.26□□□□□ -1.73
PHC3-213ENST00000491258 DCUN1D3Q8IWE4 304 aa4.26□□□□□ -1.73
PHC3-213ENST00000491258 POC1AQ8NBT0 407 aa4.26□□□□□ -1.73
PHC3-213ENST00000491258 NEXN-AS1Q8NBZ9 246 aa4.26□□□□□ -1.73
PHC3-213ENST00000491258 WDR60Q8WVS4 1066 aa4.26□□□□□ -1.73
PHC3-213ENST00000491258 SLC25A33Q9BSK2 321 aa4.26□□□□□ -1.73
PHC3-213ENST00000491258 CDH22Q9UJ99 828 aa4.26□□□□□ -1.73
PHC3-213ENST00000491258 PKP3Q9Y446 797 aa4.26□□□□□ -1.73
PHC3-213ENST00000491258 UACAQ9BZF9 1416 aa4.26□□□□□ -1.73
PHC3-213ENST00000491258 RAPGEF2Q9Y4G8 1499 aa4.25□□□□□ -1.73
PHC3-213ENST00000491258 IGHV4-28A0A0C4DH34 117 aa4.25□□□□□ -1.73
PHC3-213ENST00000491258 MYZAPP0CAP1 466 aa4.25□□□□□ -1.73
PHC3-213ENST00000491258 TAF6P49848 677 aa4.25□□□□□ -1.73
PHC3-213ENST00000491258 RBM6P78332 1123 aaKnown RBP4.25□□□□□ -1.73
PHC3-213ENST00000491258 PLK5Q496M5 336 aa4.25□□□□□ -1.73
PHC3-213ENST00000491258 EFHC1Q5JVL4 640 aa4.25□□□□□ -1.73
PHC3-213ENST00000491258 PMS2CLQ68D20 193 aa4.25□□□□□ -1.73
PHC3-213ENST00000491258 RINT1Q6NUQ1 792 aa4.25□□□□□ -1.73
PHC3-213ENST00000491258 EXOC3L1Q86VI1 746 aa4.25□□□□□ -1.73
PHC3-213ENST00000491258 DGKHQ86XP1 1220 aa4.25□□□□□ -1.73
PHC3-213ENST00000491258 TTC17Q96AE7 1141 aa4.25□□□□□ -1.73
PHC3-213ENST00000491258 TXNDC15Q96J42 360 aa4.25□□□□□ -1.73
PHC3-213ENST00000491258 IL17FQ96PD4 163 aa4.25□□□□□ -1.73
PHC3-213ENST00000491258 AGO1Q9UL18 857 aaKnown RBP4.25□□□□□ -1.73
PHC3-213ENST00000491258 RUSC2Q8N2Y8 1516 aa4.25□□□□□ -1.73
PHC3-213ENST00000491258 ANTXRLA6NF34 631 aa4.24□□□□□ -1.73
PHC3-213ENST00000491258 ERI2A8K979 691 aaKnown RBP4.24□□□□□ -1.73
PHC3-213ENST00000491258 KIF28PB7ZC32 967 aa4.24□□□□□ -1.73
PHC3-213ENST00000491258 GLP2RO95838 553 aa4.24□□□□□ -1.73
PHC3-213ENST00000491258 AMD1P17707 334 aa4.24□□□□□ -1.73
PHC3-213ENST00000491258 GM2AP17900 193 aa4.24□□□□□ -1.73
PHC3-213ENST00000491258 KLRK1P26718 216 aa4.24□□□□□ -1.73
PHC3-213ENST00000491258 ALDH18A1P54886 795 aaKnown RBP4.24□□□□□ -1.73
PHC3-213ENST00000491258 ILF3Q12906 894 aaKnown RBP eCLIP4.24□□□□□ -1.73
PHC3-213ENST00000491258 PKP1Q13835 747 aa4.24□□□□□ -1.73
PHC3-213ENST00000491258 SLC35G1Q2M3R5 365 aa4.24□□□□□ -1.73
PHC3-213ENST00000491258 C5orf22Q49AR2 442 aa4.24□□□□□ -1.73
PHC3-213ENST00000491258 VWA5B1Q5TIE3 1220 aa4.24□□□□□ -1.73
PHC3-213ENST00000491258 HIBCHQ6NVY1 386 aaPredicted RBP4.24□□□□□ -1.73
PHC3-213ENST00000491258 TTC8Q8TAM2 541 aa4.24□□□□□ -1.73
PHC3-213ENST00000491258 ZNF566Q969W8 418 aa4.24□□□□□ -1.73
PHC3-213ENST00000491258 TBCBQ99426 244 aa4.24□□□□□ -1.73
PHC3-213ENST00000491258 MECRQ9BV79 373 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms