RNA–Protein interactions for RNA: ENST00000490398.5

COL9A3-214, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 4

Gene COL9A3, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-214ENST00000490398 USP30Q70CQ3 517 aa18.54■□□□□ 0.56
COL9A3-214ENST00000490398 OR2A12Q8NGT7 310 aa18.54■□□□□ 0.56
COL9A3-214ENST00000490398 BIRC7Q96CA5 298 aa18.54■□□□□ 0.56
COL9A3-214ENST00000490398 BTBD6Q96KE9 485 aa18.54■□□□□ 0.56
COL9A3-214ENST00000490398 KLC2Q9H0B6 622 aa18.54■□□□□ 0.56
COL9A3-214ENST00000490398 THAP2Q9H0W7 228 aa18.54■□□□□ 0.56
COL9A3-214ENST00000490398 EBF2Q9HAK2 575 aa18.54■□□□□ 0.56
COL9A3-214ENST00000490398 PPM1HQ9ULR3 514 aa18.54■□□□□ 0.56
COL9A3-214ENST00000490398 SPTBN2O15020 2390 aa18.53■□□□□ 0.56
COL9A3-214ENST00000490398 NCOR2Q9Y618 2525 aa18.53■□□□□ 0.56
COL9A3-214ENST00000490398 C10orf142B7Z368 130 aa18.53■□□□□ 0.56
COL9A3-214ENST00000490398 FSBPO95073 299 aa18.53■□□□□ 0.56
COL9A3-214ENST00000490398 SDHBP21912 280 aa18.53■□□□□ 0.56
COL9A3-214ENST00000490398 EPHB2P29323 1055 aa18.53■□□□□ 0.56
COL9A3-214ENST00000490398 HOXD12P35452 270 aa18.53■□□□□ 0.56
COL9A3-214ENST00000490398 SYCP2LQ5T4T6 812 aa18.53■□□□□ 0.56
COL9A3-214ENST00000490398 C22orf39Q6P5X5 142 aa18.53■□□□□ 0.56
COL9A3-214ENST00000490398 NCEH1Q6PIU2 408 aa18.53■□□□□ 0.56
COL9A3-214ENST00000490398 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.53■□□□□ 0.56
COL9A3-214ENST00000490398 ZNF783Q6ZMS7 281 aa18.53■□□□□ 0.56
COL9A3-214ENST00000490398 VSTM4Q8IW00 320 aa18.53■□□□□ 0.56
COL9A3-214ENST00000490398 NETO2Q8NC67 525 aa18.53■□□□□ 0.56
COL9A3-214ENST00000490398 CEP76Q8TAP6 659 aa18.53■□□□□ 0.56
COL9A3-214ENST00000490398 OR8D1Q8WZ84 308 aa18.53■□□□□ 0.56
COL9A3-214ENST00000490398 SNX19Q92543 992 aa18.53■□□□□ 0.56
COL9A3-214ENST00000490398 OMDQ99983 421 aa18.53■□□□□ 0.56
COL9A3-214ENST00000490398 SNRNP25Q9BV90 132 aaKnown RBP18.53■□□□□ 0.56
COL9A3-214ENST00000490398 GTPBP2Q9BX10 602 aaKnown RBP18.53■□□□□ 0.56
COL9A3-214ENST00000490398 NUSAP1Q9BXS6 441 aaKnown RBP18.53■□□□□ 0.56
COL9A3-214ENST00000490398 SGK2Q9HBY8 427 aa18.53■□□□□ 0.56
COL9A3-214ENST00000490398 TMEM9BQ9NQ34 198 aa18.53■□□□□ 0.56
COL9A3-214ENST00000490398 SCML1Q9UN30 329 aa18.53■□□□□ 0.56
COL9A3-214ENST00000490398 FCF1Q9Y324 198 aaKnown RBP18.53■□□□□ 0.56
COL9A3-214ENST00000490398 BZW2Q9Y6E2 419 aaKnown RBP18.53■□□□□ 0.56
COL9A3-214ENST00000490398 PCDH15Q96QU1 1955 aa18.53■□□□□ 0.56
COL9A3-214ENST00000490398 MCF2LO15068 1137 aa18.52■□□□□ 0.56
COL9A3-214ENST00000490398 LRCH4O75427 683 aa18.52■□□□□ 0.56
COL9A3-214ENST00000490398 ADH1BP00325 375 aa18.52■□□□□ 0.56
COL9A3-214ENST00000490398 GOT1P17174 413 aa18.52■□□□□ 0.56
COL9A3-214ENST00000490398 C5AR1P21730 350 aa18.52■□□□□ 0.56
COL9A3-214ENST00000490398 MIPP30301 263 aa18.52■□□□□ 0.56
COL9A3-214ENST00000490398 EIF4A3P38919 411 aaKnown RBP18.52■□□□□ 0.56
COL9A3-214ENST00000490398 MAPKAPK2P49137 400 aa18.52■□□□□ 0.56
COL9A3-214ENST00000490398 UAP1L1Q3KQV9 507 aa18.52■□□□□ 0.56
COL9A3-214ENST00000490398 SPECC1LQ69YQ0 1117 aa18.52■□□□□ 0.56
COL9A3-214ENST00000490398 IL31Q6EBC2 164 aa18.52■□□□□ 0.56
COL9A3-214ENST00000490398 LAYNQ6UX15 382 aa18.52■□□□□ 0.56
COL9A3-214ENST00000490398 CPNE8Q86YQ8 564 aa18.52■□□□□ 0.56
COL9A3-214ENST00000490398 PIP4K2CQ8TBX8 421 aa18.52■□□□□ 0.56
COL9A3-214ENST00000490398 FAM131CQ96AQ9 280 aa18.52■□□□□ 0.56
COL9A3-214ENST00000490398 VOPP1Q96AW1 172 aa18.52■□□□□ 0.56
COL9A3-214ENST00000490398 ARRDC3Q96B67 414 aa18.52■□□□□ 0.56
COL9A3-214ENST00000490398 KCTD15Q96SI1 283 aaPredicted RBP18.52■□□□□ 0.56
COL9A3-214ENST00000490398 AP4E1Q9UPM8 1137 aa18.52■□□□□ 0.56
COL9A3-214ENST00000490398 NCKAP1Q9Y2A7 1128 aa18.52■□□□□ 0.56
COL9A3-214ENST00000490398 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.52■□□□□ 0.56
COL9A3-214ENST00000490398 NYNRINQ9P2P1 1898 aaKnown RBP18.52■□□□□ 0.55
COL9A3-214ENST00000490398 ARHGAP33O14559 1287 aa18.51■□□□□ 0.55
COL9A3-214ENST00000490398 WNT9AO14904 365 aa18.51■□□□□ 0.55
COL9A3-214ENST00000490398 IL1R2P27930 398 aa18.51■□□□□ 0.55
COL9A3-214ENST00000490398 HNRNPH3P31942 346 aaKnown RBP18.51■□□□□ 0.55
COL9A3-214ENST00000490398 DPP6P42658 865 aa18.51■□□□□ 0.55
COL9A3-214ENST00000490398 SERPINH1P50454 418 aaKnown RBP18.51■□□□□ 0.55
COL9A3-214ENST00000490398 ADPRHP54922 357 aa18.51■□□□□ 0.55
COL9A3-214ENST00000490398 GFPT1Q06210 699 aaPredicted RBP18.51■□□□□ 0.55
COL9A3-214ENST00000490398 CNTN1Q12860 1018 aa18.51■□□□□ 0.55
COL9A3-214ENST00000490398 KIAA0895LQ68EN5 471 aa18.51■□□□□ 0.55
COL9A3-214ENST00000490398 DPY19L3Q6ZPD9 716 aa18.51■□□□□ 0.55
COL9A3-214ENST00000490398 ERMP1Q7Z2K6 904 aa18.51■□□□□ 0.55
COL9A3-214ENST00000490398 RTL3Q8N8U3 475 aaKnown RBP18.51■□□□□ 0.55
COL9A3-214ENST00000490398 FNIP1Q8TF40 1166 aa18.51■□□□□ 0.55
COL9A3-214ENST00000490398 IQCDQ96DY2 449 aa18.51■□□□□ 0.55
COL9A3-214ENST00000490398 DHX35Q9H5Z1 703 aaKnown RBP18.51■□□□□ 0.55
COL9A3-214ENST00000490398 FZD4Q9ULV1 537 aa18.51■□□□□ 0.55
COL9A3-214ENST00000490398 ADAMTS9Q9P2N4 1935 aa18.51■□□□□ 0.55
COL9A3-214ENST00000490398 A0A1B0GTW7 788 aa18.5■□□□□ 0.55
COL9A3-214ENST00000490398 CBFA2T2O43439 604 aa18.5■□□□□ 0.55
COL9A3-214ENST00000490398 RAMP2O60895 175 aa18.5■□□□□ 0.55
COL9A3-214ENST00000490398 MYBL1P10243 752 aa18.5■□□□□ 0.55
COL9A3-214ENST00000490398 GKP32189 559 aa18.5■□□□□ 0.55
COL9A3-214ENST00000490398 CHRNA3P32297 505 aa18.5■□□□□ 0.55
COL9A3-214ENST00000490398 PPP2CBP62714 309 aa18.5■□□□□ 0.55
COL9A3-214ENST00000490398 PPP2CAP67775 309 aa18.5■□□□□ 0.55
COL9A3-214ENST00000490398 GRIK2Q13002 908 aa18.5■□□□□ 0.55
COL9A3-214ENST00000490398 POLD3Q15054 466 aaPredicted RBP18.5■□□□□ 0.55
COL9A3-214ENST00000490398 ASTE1Q2TB18 679 aaPredicted RBP18.5■□□□□ 0.55
COL9A3-214ENST00000490398 ARSIQ5FYB1 569 aa18.5■□□□□ 0.55
COL9A3-214ENST00000490398 PPM1JQ5JR12 505 aa18.5■□□□□ 0.55
COL9A3-214ENST00000490398 CCDC122Q5T0U0 273 aa18.5■□□□□ 0.55
COL9A3-214ENST00000490398 AGBL4Q5VU57 503 aa18.5■□□□□ 0.55
COL9A3-214ENST00000490398 TXNRD3NBQ6F5E7 133 aa18.5■□□□□ 0.55
COL9A3-214ENST00000490398 RETSATQ6NUM9 610 aa18.5■□□□□ 0.55
COL9A3-214ENST00000490398 ALKBH5Q6P6C2 394 aaKnown RBP18.5■□□□□ 0.55
COL9A3-214ENST00000490398 OR14C36Q8NHC7 312 aa18.5■□□□□ 0.55
COL9A3-214ENST00000490398 GRIN3AQ8TCU5 1115 aa18.5■□□□□ 0.55
COL9A3-214ENST00000490398 TRIM11Q96F44 468 aa18.5■□□□□ 0.55
COL9A3-214ENST00000490398 HMCESQ96FZ2 354 aa18.5■□□□□ 0.55
COL9A3-214ENST00000490398 DNAJC7Q99615 494 aa18.5■□□□□ 0.55
COL9A3-214ENST00000490398 CHP1Q99653 195 aa18.5■□□□□ 0.55
COL9A3-214ENST00000490398 EPAS1Q99814 870 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms