RNA–Protein interactions for RNA: ENST00000490332.2

PTPRK-213, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 612 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-213ENST00000490332 IL1R2P27930 398 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 GNL1P36915 607 aaPredicted RBP5.2□□□□□ -1.58
PTPRK-213ENST00000490332 FDFT1P37268 417 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 NOVA1P51513 510 aaKnown RBP5.2□□□□□ -1.58
PTPRK-213ENST00000490332 NRLP54845 237 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 AIF1P55008 147 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 DYNLT1P63172 113 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 ELF3P78545 371 aaPredicted RBP5.2□□□□□ -1.58
PTPRK-213ENST00000490332 SLC18A2Q05940 514 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 CDK18Q07002 472 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 BST2Q10589 180 aaKnown RBP5.2□□□□□ -1.58
PTPRK-213ENST00000490332 KCNC3Q14003 757 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 MPP2Q14168 576 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 LRRC14Q15048 493 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 TPSAB1Q15661 275 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 ZBTB6Q15916 424 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 BBS9Q3SYG4 887 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 PLEKHG4Q58EX7 1191 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 SLC45A4Q5BKX6 768 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 STXBP5Q5T5C0 1151 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 TTC39BQ5VTQ0 682 aaPredicted RBP5.2□□□□□ -1.58
PTPRK-213ENST00000490332 ATG16L1Q676U5 607 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 SLC9A4Q6AI14 798 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 TXNRD3NBQ6F5E7 133 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 NOTUMQ6P988 496 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 STRADAQ7RTN6 431 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 OTOP3Q7RTS5 596 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 CATSPER4Q7RTX7 472 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 SLC26A11Q86WA9 606 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 CHSY1Q86X52 802 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 TRIM50Q86XT4 487 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 UNC45BQ8IWX7 931 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 KIAA0319LQ8IZA0 1049 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 ARFGAP1Q8N6T3 406 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 PLD5Q8N7P1 536 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 FAM71DQ8N9W8 422 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 FBXO36Q8NEA4 188 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 VN1R2Q8NFZ6 395 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 PJA1Q8NG27 643 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 GDAP1Q8TB36 358 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 UBA3Q8TBC4 463 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 RAB3IL1Q8TBN0 382 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 MICAL1Q8TDZ2 1067 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 SLC35F5Q8WV83 523 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 TRAPPC12Q8WVT3 735 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 HSPH1Q92598 858 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 ZNF75CPQ92670 426 aaPredicted RBP5.2□□□□□ -1.58
PTPRK-213ENST00000490332 CENPIQ92674 756 aaPredicted RBP5.2□□□□□ -1.58
PTPRK-213ENST00000490332 KAT2BQ92831 832 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 INPP5DQ92835 1189 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 COPS5Q92905 334 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 FAF2Q96CS3 445 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 KLHL29Q96CT2 875 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 SHDQ96IW2 340 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 FAM84AQ96KN4 292 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 TNIP3Q96KP6 325 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 ZNF560Q96MR9 790 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 TMEM237Q96Q45 408 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 LRRC37BQ96QE4 947 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 FAM118BQ9BPY3 351 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 PAIP2Q9BPZ3 127 aaKnown RBP5.2□□□□□ -1.58
PTPRK-213ENST00000490332 C16orf70Q9BSU1 422 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 NAT9Q9BTE0 207 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 CALN1Q9BXU9 219 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 IQCGQ9H095 443 aaKnown RBP5.2□□□□□ -1.58
PTPRK-213ENST00000490332 BRD8Q9H0E9 1235 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 SDCBP2Q9H190 292 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 SNX25Q9H3E2 840 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 SMYD3Q9H7B4 428 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 ECT2Q9H8V3 914 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 XAB2Q9HCS7 855 aaKnown RBP5.2□□□□□ -1.58
PTPRK-213ENST00000490332 ARHGEF3Q9NR81 526 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 PDGFCQ9NRA1 345 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.2□□□□□ -1.58
PTPRK-213ENST00000490332 DNAJC17Q9NVM6 304 aaKnown RBP5.2□□□□□ -1.58
PTPRK-213ENST00000490332 GDAP2Q9NXN4 497 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 KCNK4Q9NYG8 393 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.2□□□□□ -1.58
PTPRK-213ENST00000490332 CYTH4Q9UIA0 394 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 TSPAN16Q9UKR8 245 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 PHTF1Q9UMS5 762 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 SRPK3Q9UPE1 567 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 MTO1Q9Y2Z2 717 aaKnown RBP5.2□□□□□ -1.58
PTPRK-213ENST00000490332 RAD54BQ9Y620 910 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 ANK1P16157 1881 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 COL12A1Q99715 3063 aa5.19□□□□□ -1.58
PTPRK-213ENST00000490332 A8MXQ7 604 aa5.19□□□□□ -1.58
PTPRK-213ENST00000490332 TMEM229AB2RXF0 380 aa5.19□□□□□ -1.58
PTPRK-213ENST00000490332 E5RJQ4 531 aa5.19□□□□□ -1.58
PTPRK-213ENST00000490332 AP3B1O00203 1094 aa5.19□□□□□ -1.58
PTPRK-213ENST00000490332 PIRO00625 290 aa5.19□□□□□ -1.58
PTPRK-213ENST00000490332 TRAFD1O14545 582 aaPredicted RBP5.19□□□□□ -1.58
PTPRK-213ENST00000490332 KLF11O14901 512 aa5.19□□□□□ -1.58
PTPRK-213ENST00000490332 PER2O15055 1255 aa5.19□□□□□ -1.58
PTPRK-213ENST00000490332 HUS1O60921 280 aa5.19□□□□□ -1.58
PTPRK-213ENST00000490332 ATP2C2O75185 946 aa5.19□□□□□ -1.58
PTPRK-213ENST00000490332 C1QL1O75973 258 aa5.19□□□□□ -1.58
PTPRK-213ENST00000490332 UBOX5O94941 541 aa5.19□□□□□ -1.58
PTPRK-213ENST00000490332 FBXO21O94952 628 aa5.19□□□□□ -1.58
PTPRK-213ENST00000490332 NPTXRO95502 500 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms