RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 C22orf39Q6P5X5 142 aa17.85■□□□□ 0.45
SEC13-218ENST00000490283 LINGO4Q6UY18 593 aa17.85■□□□□ 0.45
SEC13-218ENST00000490283 PIP4P1Q86T03 277 aa17.85■□□□□ 0.45
SEC13-218ENST00000490283 TBC1D3Q8IZP1 549 aaPredicted RBP17.85■□□□□ 0.45
SEC13-218ENST00000490283 CCDC185Q8N715 623 aa17.85■□□□□ 0.45
SEC13-218ENST00000490283 C1orf216Q8TAB5 229 aa17.85■□□□□ 0.45
SEC13-218ENST00000490283 NAP1L5Q96NT1 182 aaPredicted RBP17.85■□□□□ 0.45
SEC13-218ENST00000490283 ACE2Q9BYF1 805 aaPredicted RBP17.85■□□□□ 0.45
SEC13-218ENST00000490283 RAB6CQ9H0N0 254 aa17.85■□□□□ 0.45
SEC13-218ENST00000490283 KDM4CQ9H3R0 1056 aa17.85■□□□□ 0.45
SEC13-218ENST00000490283 PARVAQ9NVD7 372 aa17.85■□□□□ 0.45
SEC13-218ENST00000490283 AIPL1Q9NZN9 384 aa17.85■□□□□ 0.45
SEC13-218ENST00000490283 PPM1HQ9ULR3 514 aa17.85■□□□□ 0.45
SEC13-218ENST00000490283 PCDHB9Q9Y5E1 797 aa17.85■□□□□ 0.45
SEC13-218ENST00000490283 LRIG2O94898 1065 aa17.84■□□□□ 0.45
SEC13-218ENST00000490283 MT-CO1P00395 513 aa17.84■□□□□ 0.45
SEC13-218ENST00000490283 IGHV4-34P06331 123 aa17.84■□□□□ 0.45
SEC13-218ENST00000490283 PMLP29590 882 aa17.84■□□□□ 0.45
SEC13-218ENST00000490283 CHRNA3P32297 505 aa17.84■□□□□ 0.45
SEC13-218ENST00000490283 DRD3P35462 400 aa17.84■□□□□ 0.45
SEC13-218ENST00000490283 SCAPQ12770 1279 aa17.84■□□□□ 0.45
SEC13-218ENST00000490283 NR1I3Q14994 352 aa17.84■□□□□ 0.45
SEC13-218ENST00000490283 HLA-BQ31612 363 aa17.84■□□□□ 0.45
SEC13-218ENST00000490283 SLC45A4Q5BKX6 768 aa17.84■□□□□ 0.45
SEC13-218ENST00000490283 MANEALQ5VSG8 457 aa17.84■□□□□ 0.45
SEC13-218ENST00000490283 LUZP1Q86V48 1076 aa17.84■□□□□ 0.45
SEC13-218ENST00000490283 PPP1R16AQ96I34 528 aa17.84■□□□□ 0.45
SEC13-218ENST00000490283 EPAS1Q99814 870 aa17.84■□□□□ 0.45
SEC13-218ENST00000490283 CEP44Q9C0F1 390 aa17.84■□□□□ 0.45
SEC13-218ENST00000490283 HAUS4Q9H6D7 363 aa17.84■□□□□ 0.45
SEC13-218ENST00000490283 AASDHPPTQ9NRN7 309 aa17.84■□□□□ 0.45
SEC13-218ENST00000490283 TMEM248Q9NWD8 314 aa17.84■□□□□ 0.45
SEC13-218ENST00000490283 ANKRD6Q9Y2G4 727 aa17.84■□□□□ 0.45
SEC13-218ENST00000490283 PCDH15Q96QU1 1955 aa17.84■□□□□ 0.45
SEC13-218ENST00000490283 K7ERQ8 282 aa17.83■□□□□ 0.44
SEC13-218ENST00000490283 KPNA3O00505 521 aaPredicted RBP17.83■□□□□ 0.44
SEC13-218ENST00000490283 RAMP2O60895 175 aa17.83■□□□□ 0.44
SEC13-218ENST00000490283 GJB3O75712 270 aa17.83■□□□□ 0.44
SEC13-218ENST00000490283 ZNF883P0CG24 379 aa17.83■□□□□ 0.44
SEC13-218ENST00000490283 CD59P13987 128 aa17.83■□□□□ 0.44
SEC13-218ENST00000490283 NUDT1P36639 197 aa17.83■□□□□ 0.44
SEC13-218ENST00000490283 SERPINH1P50454 418 aaKnown RBP17.83■□□□□ 0.44
SEC13-218ENST00000490283 UBASH3AP57075 661 aa17.83■□□□□ 0.44
SEC13-218ENST00000490283 RPL7AP62424 266 aaKnown RBP17.83■□□□□ 0.44
SEC13-218ENST00000490283 SIM1P81133 766 aaPredicted RBP17.83■□□□□ 0.44
SEC13-218ENST00000490283 FANCCQ00597 558 aa17.83■□□□□ 0.44
SEC13-218ENST00000490283 SUZ12Q15022 739 aaKnown RBP17.83■□□□□ 0.44
SEC13-218ENST00000490283 KIF19Q2TAC6 998 aa17.83■□□□□ 0.44
SEC13-218ENST00000490283 SKOR2Q2VWA4 1001 aaPredicted RBP17.83■□□□□ 0.44
SEC13-218ENST00000490283 POM121L1PQ3SYA9 428 aa17.83■□□□□ 0.44
SEC13-218ENST00000490283 TMC6Q7Z403 805 aa17.83■□□□□ 0.44
SEC13-218ENST00000490283 PRPF39Q86UA1 669 aaKnown RBP17.83■□□□□ 0.44
SEC13-218ENST00000490283 ZNF354CQ86Y25 554 aa17.83■□□□□ 0.44
SEC13-218ENST00000490283 NAXDQ8IW45 347 aa17.83■□□□□ 0.44
SEC13-218ENST00000490283 PCDH20Q8N6Y1 951 aaKnown RBP17.83■□□□□ 0.44
SEC13-218ENST00000490283 TMIEQ8NEW7 156 aa17.83■□□□□ 0.44
SEC13-218ENST00000490283 IQCDQ96DY2 449 aa17.83■□□□□ 0.44
SEC13-218ENST00000490283 TRIM11Q96F44 468 aa17.83■□□□□ 0.44
SEC13-218ENST00000490283 MAGEH1Q9H213 219 aa17.83■□□□□ 0.44
SEC13-218ENST00000490283 TNKS2Q9H2K2 1166 aa17.83■□□□□ 0.44
SEC13-218ENST00000490283 TM7SF3Q9NS93 570 aa17.83■□□□□ 0.44
SEC13-218ENST00000490283 ZNF212Q9UDV6 495 aa17.83■□□□□ 0.44
SEC13-218ENST00000490283 DNAI1Q9UI46 699 aa17.83■□□□□ 0.44
SEC13-218ENST00000490283 SARDHQ9UL12 918 aa17.83■□□□□ 0.44
SEC13-218ENST00000490283 CXorf51AA0A1B0GTR3 108 aa17.82■□□□□ 0.44
SEC13-218ENST00000490283 TCRBV5S1A1TA0A578 114 aa17.82■□□□□ 0.44
SEC13-218ENST00000490283 FAM72CH0Y354 149 aa17.82■□□□□ 0.44
SEC13-218ENST00000490283 SMAD6O43541 496 aaKnown RBP17.82■□□□□ 0.44
SEC13-218ENST00000490283 PLRG1O43660 514 aaKnown RBP17.82■□□□□ 0.44
SEC13-218ENST00000490283 RTN2O75298 545 aa17.82■□□□□ 0.44
SEC13-218ENST00000490283 TPM3P06753 285 aa17.82■□□□□ 0.44
SEC13-218ENST00000490283 GZMAP12544 262 aa17.82■□□□□ 0.44
SEC13-218ENST00000490283 GLDCP23378 1020 aa17.82■□□□□ 0.44
SEC13-218ENST00000490283 PSMA2P25787 234 aa17.82■□□□□ 0.44
SEC13-218ENST00000490283 EPHB2P29323 1055 aa17.82■□□□□ 0.44
SEC13-218ENST00000490283 L1CAMP32004 1257 aa17.82■□□□□ 0.44
SEC13-218ENST00000490283 PRKCIP41743 596 aa17.82■□□□□ 0.44
SEC13-218ENST00000490283 DNA2P51530 1060 aa17.82■□□□□ 0.44
SEC13-218ENST00000490283 CNTN1Q12860 1018 aa17.82■□□□□ 0.44
SEC13-218ENST00000490283 FOXC1Q12948 553 aa17.82■□□□□ 0.44
SEC13-218ENST00000490283 TDRD12Q587J7 1177 aaKnown RBP17.82■□□□□ 0.44
SEC13-218ENST00000490283 FIGNQ5HY92 759 aa17.82■□□□□ 0.44
SEC13-218ENST00000490283 PPP1R15BQ5SWA1 713 aa17.82■□□□□ 0.44
SEC13-218ENST00000490283 FAM72AQ5TYM5 149 aa17.82■□□□□ 0.44
SEC13-218ENST00000490283 FAM72DQ6L9T8 149 aa17.82■□□□□ 0.44
SEC13-218ENST00000490283 VPS36Q86VN1 386 aa17.82■□□□□ 0.44
SEC13-218ENST00000490283 NLRP14Q86W24 1093 aa17.82■□□□□ 0.44
SEC13-218ENST00000490283 FAM72BQ86X60 149 aa17.82■□□□□ 0.44
SEC13-218ENST00000490283 OR2A12Q8NGT7 310 aa17.82■□□□□ 0.44
SEC13-218ENST00000490283 GRIN3AQ8TCU5 1115 aa17.82■□□□□ 0.44
SEC13-218ENST00000490283 SETD7Q8WTS6 366 aaKnown RBP17.82■□□□□ 0.44
SEC13-218ENST00000490283 SERAC1Q96JX3 654 aa17.82■□□□□ 0.44
SEC13-218ENST00000490283 SLC6A18Q96N87 628 aa17.82■□□□□ 0.44
SEC13-218ENST00000490283 SYT11Q9BT88 431 aa17.82■□□□□ 0.44
SEC13-218ENST00000490283 CATSPERBQ9H7T0 1116 aa17.82■□□□□ 0.44
SEC13-218ENST00000490283 PREBQ9HCU5 417 aa17.82■□□□□ 0.44
SEC13-218ENST00000490283 DONSONQ9NYP3 566 aa17.82■□□□□ 0.44
SEC13-218ENST00000490283 TAS2R14Q9NYV8 317 aa17.82■□□□□ 0.44
SEC13-218ENST00000490283 IL36AQ9UHA7 158 aa17.82■□□□□ 0.44
SEC13-218ENST00000490283 SNX11Q9Y5W9 270 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms