RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 CBX6O95503 412 aa4.24□□□□□ -1.73
CD46-216ENST00000490278 ELF1P32519 619 aa4.24□□□□□ -1.73
CD46-216ENST00000490278 DDIT3P35638 169 aa4.24□□□□□ -1.73
CD46-216ENST00000490278 PTPN9P43378 593 aa4.24□□□□□ -1.73
CD46-216ENST00000490278 NR1H2P55055 460 aa4.24□□□□□ -1.73
CD46-216ENST00000490278 RPP30P78346 268 aaKnown RBP4.24□□□□□ -1.73
CD46-216ENST00000490278 SSBP2P81877 361 aaPredicted RBP4.24□□□□□ -1.73
CD46-216ENST00000490278 GALNT2Q10471 571 aa4.24□□□□□ -1.73
CD46-216ENST00000490278 TDGQ13569 410 aa4.24□□□□□ -1.73
CD46-216ENST00000490278 CAMK1Q14012 370 aa4.24□□□□□ -1.73
CD46-216ENST00000490278 SLC4A8Q2Y0W8 1093 aa4.24□□□□□ -1.73
CD46-216ENST00000490278 Q4G0T1 1027 aa4.24□□□□□ -1.73
CD46-216ENST00000490278 C10orf25Q5T742 122 aa4.24□□□□□ -1.73
CD46-216ENST00000490278 SLC9C2Q5TAH2 1124 aa4.24□□□□□ -1.73
CD46-216ENST00000490278 AAGABQ6PD74 315 aa4.24□□□□□ -1.73
CD46-216ENST00000490278 SLC22A25Q6T423 547 aa4.24□□□□□ -1.73
CD46-216ENST00000490278 GHDCQ8N2G8 530 aa4.24□□□□□ -1.73
CD46-216ENST00000490278 SLC44A5Q8NCS7 719 aa4.24□□□□□ -1.73
CD46-216ENST00000490278 TNIP2Q8NFZ5 429 aa4.24□□□□□ -1.73
CD46-216ENST00000490278 ZCCHC10Q8TBK6 192 aa4.24□□□□□ -1.73
CD46-216ENST00000490278 NOC3LQ8WTT2 800 aaKnown RBP4.24□□□□□ -1.73
CD46-216ENST00000490278 HDAC7Q8WUI4 952 aa4.24□□□□□ -1.73
CD46-216ENST00000490278 FAR1Q8WVX9 515 aa4.24□□□□□ -1.73
CD46-216ENST00000490278 RUFY2Q8WXA3 655 aa4.24□□□□□ -1.73
CD46-216ENST00000490278 EME1Q96AY2 570 aa4.24□□□□□ -1.73
CD46-216ENST00000490278 COQ8BQ96D53 544 aa4.24□□□□□ -1.73
CD46-216ENST00000490278 ZBTB10Q96DT7 871 aa4.24□□□□□ -1.73
CD46-216ENST00000490278 ELP4Q96EB1 424 aa4.24□□□□□ -1.73
CD46-216ENST00000490278 ZNF419Q96HQ0 510 aaPredicted RBP4.24□□□□□ -1.73
CD46-216ENST00000490278 APOPT1Q96IL0 206 aa4.24□□□□□ -1.73
CD46-216ENST00000490278 MPP4Q96JB8 637 aa4.24□□□□□ -1.73
CD46-216ENST00000490278 EYA3Q99504 573 aa4.24□□□□□ -1.73
CD46-216ENST00000490278 WDR83Q9BRX9 315 aaKnown RBP4.24□□□□□ -1.73
CD46-216ENST00000490278 AGXT2Q9BYV1 514 aa4.24□□□□□ -1.73
CD46-216ENST00000490278 PAIP1Q9H074 479 aaKnown RBP4.24□□□□□ -1.73
CD46-216ENST00000490278 INTS2Q9H0H0 1204 aaKnown RBP4.24□□□□□ -1.73
CD46-216ENST00000490278 LMAN2LQ9H0V9 348 aa4.24□□□□□ -1.73
CD46-216ENST00000490278 EPHX3Q9H6B9 360 aa4.24□□□□□ -1.73
CD46-216ENST00000490278 AAMDCQ9H7C9 122 aa4.24□□□□□ -1.73
CD46-216ENST00000490278 PREBQ9HCU5 417 aa4.24□□□□□ -1.73
CD46-216ENST00000490278 SPAG4Q9NPE6 437 aa4.24□□□□□ -1.73
CD46-216ENST00000490278 THSD1Q9NS62 852 aa4.24□□□□□ -1.73
CD46-216ENST00000490278 BEX4Q9NWD9 120 aaPredicted RBP4.24□□□□□ -1.73
CD46-216ENST00000490278 GRHL1Q9NZI5 618 aa4.24□□□□□ -1.73
CD46-216ENST00000490278 FBXO40Q9UH90 709 aa4.24□□□□□ -1.73
CD46-216ENST00000490278 CYP46A1Q9Y6A2 500 aa4.24□□□□□ -1.73
CD46-216ENST00000490278 ZMYM2Q9UBW7 1377 aa4.24□□□□□ -1.73
CD46-216ENST00000490278 TTBK1Q5TCY1 1321 aaPredicted RBP4.23□□□□□ -1.73
CD46-216ENST00000490278 GAGE10A6NGK3 116 aa4.23□□□□□ -1.73
CD46-216ENST00000490278 TLX3O43711 291 aaPredicted RBP4.23□□□□□ -1.73
CD46-216ENST00000490278 CYP19A1P11511 503 aaPredicted RBP4.23□□□□□ -1.73
CD46-216ENST00000490278 CD72P21854 359 aa4.23□□□□□ -1.73
CD46-216ENST00000490278 KRT9P35527 623 aa4.23□□□□□ -1.73
CD46-216ENST00000490278 SLC16A2P36021 539 aa4.23□□□□□ -1.73
CD46-216ENST00000490278 GGT5P36269 586 aa4.23□□□□□ -1.73
CD46-216ENST00000490278 MMP13P45452 471 aa4.23□□□□□ -1.73
CD46-216ENST00000490278 ABCG1P45844 678 aa4.23□□□□□ -1.73
CD46-216ENST00000490278 CDH15P55291 814 aa4.23□□□□□ -1.73
CD46-216ENST00000490278 MRPS21P82921 87 aaKnown RBP4.23□□□□□ -1.73
CD46-216ENST00000490278 SMTNL2Q2TAL5 461 aa4.23□□□□□ -1.73
CD46-216ENST00000490278 FBXO43Q4G163 708 aa4.23□□□□□ -1.73
CD46-216ENST00000490278 ENTPD8Q5MY95 495 aa4.23□□□□□ -1.73
CD46-216ENST00000490278 PIK3CD-AS1Q5SR53 167 aa4.23□□□□□ -1.73
CD46-216ENST00000490278 C6orf10Q5SRN2 563 aa4.23□□□□□ -1.73
CD46-216ENST00000490278 UBAP2Q5T6F2 1119 aaKnown RBP4.23□□□□□ -1.73
CD46-216ENST00000490278 B4GALNT4Q76KP1 1039 aa4.23□□□□□ -1.73
CD46-216ENST00000490278 KDELC2Q7Z4H8 507 aa4.23□□□□□ -1.73
CD46-216ENST00000490278 WDR5BQ86VZ2 330 aa4.23□□□□□ -1.73
CD46-216ENST00000490278 FAM185AQ8N0U4 392 aa4.23□□□□□ -1.73
CD46-216ENST00000490278 PCYOX1LQ8NBM8 494 aa4.23□□□□□ -1.73
CD46-216ENST00000490278 PIGOQ8TEQ8 1089 aa4.23□□□□□ -1.73
CD46-216ENST00000490278 TBC1D22AQ8WUA7 517 aa4.23□□□□□ -1.73
CD46-216ENST00000490278 HSPH1Q92598 858 aa4.23□□□□□ -1.73
CD46-216ENST00000490278 ZDHHC7Q9NXF8 308 aa4.23□□□□□ -1.73
CD46-216ENST00000490278 PPP1R14DQ9NXH3 145 aa4.23□□□□□ -1.73
CD46-216ENST00000490278 HCN3Q9P1Z3 774 aa4.23□□□□□ -1.73
CD46-216ENST00000490278 NLKQ9UBE8 527 aa4.23□□□□□ -1.73
CD46-216ENST00000490278 CNPY2Q9Y2B0 182 aa4.23□□□□□ -1.73
CD46-216ENST00000490278 BTBD3Q9Y2F9 522 aa4.23□□□□□ -1.73
CD46-216ENST00000490278 CLDN16Q9Y5I7 305 aa4.23□□□□□ -1.73
CD46-216ENST00000490278 MST1RQ04912 1400 aa4.22□□□□□ -1.73
CD46-216ENST00000490278 A0A0A0MQY5 61 aa4.22□□□□□ -1.73
CD46-216ENST00000490278 TRBV5-7A0A0A0MS05 114 aa4.22□□□□□ -1.73
CD46-216ENST00000490278 C17orf113A0A1B0GUU1 675 aa4.22□□□□□ -1.73
CD46-216ENST00000490278 TARSL2A2RTX5 802 aaKnown RBP4.22□□□□□ -1.73
CD46-216ENST00000490278 TEX22C9J3V5 150 aa4.22□□□□□ -1.73
CD46-216ENST00000490278 TNPO2O14787 897 aaKnown RBP4.22□□□□□ -1.73
CD46-216ENST00000490278 TSPAN4O14817 238 aa4.22□□□□□ -1.73
CD46-216ENST00000490278 TMCC1O94876 653 aa4.22□□□□□ -1.73
CD46-216ENST00000490278 SERPINC1P01008 464 aa4.22□□□□□ -1.73
CD46-216ENST00000490278 IL1AP01583 271 aa4.22□□□□□ -1.73
CD46-216ENST00000490278 ATP1A3P13637 1013 aa4.22□□□□□ -1.73
CD46-216ENST00000490278 ABCD3P28288 659 aa4.22□□□□□ -1.73
CD46-216ENST00000490278 PAFAH1B1P43034 410 aa4.22□□□□□ -1.73
CD46-216ENST00000490278 MPP1Q00013 466 aa4.22□□□□□ -1.73
CD46-216ENST00000490278 DDX10Q13206 875 aaKnown RBP4.22□□□□□ -1.73
CD46-216ENST00000490278 MTX1Q13505 466 aa4.22□□□□□ -1.73
CD46-216ENST00000490278 RPE65Q16518 533 aa4.22□□□□□ -1.73
CD46-216ENST00000490278 ZNF766Q5HY98 468 aa4.22□□□□□ -1.73
CD46-216ENST00000490278 COLEC12Q5KU26 742 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms