RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 BGNP21810 368 aa8.98□□□□□ -0.97
LSAMP-205ENST00000490035 CPA2P48052 419 aa8.98□□□□□ -0.97
LSAMP-205ENST00000490035 CACNA2D1P54289 1103 aa8.98□□□□□ -0.97
LSAMP-205ENST00000490035 COPZ1P61923 177 aa8.98□□□□□ -0.97
LSAMP-205ENST00000490035 GJB7Q6PEY0 223 aa8.98□□□□□ -0.97
LSAMP-205ENST00000490035 KIAA0895Q8NCT3 520 aa8.98□□□□□ -0.97
LSAMP-205ENST00000490035 TRIT1Q9H3H1 467 aaKnown RBP8.98□□□□□ -0.97
LSAMP-205ENST00000490035 PRKAG3Q9UGI9 489 aa8.98□□□□□ -0.97
LSAMP-205ENST00000490035 CORO1CQ9ULV4 474 aaPredicted RBP8.98□□□□□ -0.97
LSAMP-205ENST00000490035 SEC22BO75396 215 aa8.97□□□□□ -0.97
LSAMP-205ENST00000490035 WFS1O76024 890 aa8.97□□□□□ -0.97
LSAMP-205ENST00000490035 UPP2O95045 317 aa8.97□□□□□ -0.97
LSAMP-205ENST00000490035 CCNDBP1O95273 360 aa8.97□□□□□ -0.97
LSAMP-205ENST00000490035 SERPINA6P08185 405 aa8.97□□□□□ -0.97
LSAMP-205ENST00000490035 SNRPB2P08579 225 aaKnown RBP8.97□□□□□ -0.97
LSAMP-205ENST00000490035 TSPAN19P0C672 248 aa8.97□□□□□ -0.97
LSAMP-205ENST00000490035 PPATQ06203 517 aa8.97□□□□□ -0.97
LSAMP-205ENST00000490035 LSM12Q3MHD2 195 aaKnown RBP8.97□□□□□ -0.97
LSAMP-205ENST00000490035 RCOR3Q9P2K3 495 aaPredicted RBP8.97□□□□□ -0.97
LSAMP-205ENST00000490035 CDH9Q9ULB4 789 aa8.97□□□□□ -0.97
LSAMP-205ENST00000490035 A0A0G2JLW4 131 aa8.97□□□□□ -0.97
LSAMP-205ENST00000490035 CPSF4O95639 269 aaKnown RBP8.97□□□□□ -0.97
LSAMP-205ENST00000490035 CHKAP35790 457 aa8.97□□□□□ -0.97
LSAMP-205ENST00000490035 TUBP50607 506 aa8.97□□□□□ -0.97
LSAMP-205ENST00000490035 SULT2A1Q06520 285 aa8.97□□□□□ -0.97
LSAMP-205ENST00000490035 BROXQ5VW32 411 aa8.97□□□□□ -0.97
LSAMP-205ENST00000490035 AFTPHQ6ULP2 937 aa8.97□□□□□ -0.97
LSAMP-205ENST00000490035 MYLPFQ96A32 169 aa8.97□□□□□ -0.97
LSAMP-205ENST00000490035 SPG21Q9NZD8 308 aa8.97□□□□□ -0.97
LSAMP-205ENST00000490035 C2CD2Q9Y426 696 aa8.97□□□□□ -0.97
LSAMP-205ENST00000490035 MYH1P12882 1939 aa8.97□□□□□ -0.97
LSAMP-205ENST00000490035 MYH4Q9Y623 1939 aa8.97□□□□□ -0.97
LSAMP-205ENST00000490035 LTA4HP09960 611 aaKnown RBP8.97□□□□□ -0.97
LSAMP-205ENST00000490035 NUDT17P0C025 328 aa8.97□□□□□ -0.97
LSAMP-205ENST00000490035 NFKB1P19838 968 aa8.97□□□□□ -0.97
LSAMP-205ENST00000490035 IL12AP29459 219 aa8.97□□□□□ -0.97
LSAMP-205ENST00000490035 LRPAP1P30533 357 aa8.97□□□□□ -0.97
LSAMP-205ENST00000490035 ZNF143P52747 638 aaPredicted RBP8.97□□□□□ -0.97
LSAMP-205ENST00000490035 ATG4AQ8WYN0 398 aa8.97□□□□□ -0.97
LSAMP-205ENST00000490035 NUAK2Q9H093 628 aa8.97□□□□□ -0.97
LSAMP-205ENST00000490035 OSGEPQ9NPF4 335 aa8.97□□□□□ -0.97
LSAMP-205ENST00000490035 AASDHPPTQ9NRN7 309 aa8.97□□□□□ -0.97
LSAMP-205ENST00000490035 ANGPT4Q9Y264 503 aa8.97□□□□□ -0.97
LSAMP-205ENST00000490035 FAM208AQ9UK61 1670 aaKnown RBP8.97□□□□□ -0.97
LSAMP-205ENST00000490035 FCHO1O14526 889 aa8.97□□□□□ -0.97
LSAMP-205ENST00000490035 ATP5F1P24539 256 aaPredicted RBP8.97□□□□□ -0.97
LSAMP-205ENST00000490035 ATP5C1P36542 298 aaKnown RBP8.97□□□□□ -0.97
LSAMP-205ENST00000490035 CDC42P60953 191 aa8.97□□□□□ -0.97
LSAMP-205ENST00000490035 OVGP1Q12889 678 aa8.97□□□□□ -0.97
LSAMP-205ENST00000490035 POTEHQ6S545 545 aa8.97□□□□□ -0.97
LSAMP-205ENST00000490035 WNT8BQ93098 351 aa8.97□□□□□ -0.97
LSAMP-205ENST00000490035 MED8Q96G25 268 aa8.97□□□□□ -0.97
LSAMP-205ENST00000490035 ACOX2Q99424 681 aa8.97□□□□□ -0.97
LSAMP-205ENST00000490035 WDR12Q9GZL7 423 aaKnown RBP8.97□□□□□ -0.97
LSAMP-205ENST00000490035 SYNDIG1Q9H7V2 258 aa8.97□□□□□ -0.97
LSAMP-205ENST00000490035 TRPV2Q9Y5S1 764 aa8.97□□□□□ -0.97
LSAMP-205ENST00000490035 PIPSLA2A3N6 862 aa8.97□□□□□ -0.97
LSAMP-205ENST00000490035 H3BNX3 289 aa8.97□□□□□ -0.97
LSAMP-205ENST00000490035 CASP4P49662 377 aa8.97□□□□□ -0.97
LSAMP-205ENST00000490035 SCNN1BP51168 640 aa8.97□□□□□ -0.97
LSAMP-205ENST00000490035 PPIDQ08752 370 aaKnown RBP8.97□□□□□ -0.97
LSAMP-205ENST00000490035 DCTN2Q13561 401 aaKnown RBP8.97□□□□□ -0.97
LSAMP-205ENST00000490035 DDX39BQ13838 428 aaKnown RBP8.97□□□□□ -0.97
LSAMP-205ENST00000490035 TRIM40Q6P9F5 258 aa8.97□□□□□ -0.97
LSAMP-205ENST00000490035 AGMOQ6ZNB7 445 aa8.97□□□□□ -0.97
LSAMP-205ENST00000490035 C15orf52Q6ZUT6 534 aaKnown RBP8.97□□□□□ -0.97
LSAMP-205ENST00000490035 EIF3MQ7L2H7 374 aaKnown RBP8.97□□□□□ -0.97
LSAMP-205ENST00000490035 FAM220AQ7Z4H9 259 aa8.97□□□□□ -0.97
LSAMP-205ENST00000490035 FAM131BQ86XD5 332 aa8.97□□□□□ -0.97
LSAMP-205ENST00000490035 CACTIN-AS1Q8N1I8 211 aa8.97□□□□□ -0.97
LSAMP-205ENST00000490035 HOPXQ9BPY8 73 aaPredicted RBP8.97□□□□□ -0.97
LSAMP-205ENST00000490035 RNPEPL1Q9HAU8 725 aa8.97□□□□□ -0.97
LSAMP-205ENST00000490035 LIMD1Q9UGP4 676 aa8.97□□□□□ -0.97
LSAMP-205ENST00000490035 BTBD3Q9Y2F9 522 aa8.97□□□□□ -0.97
LSAMP-205ENST00000490035 SQORQ9Y6N5 450 aa8.97□□□□□ -0.97
LSAMP-205ENST00000490035 TNS2Q63HR2 1409 aa8.97□□□□□ -0.97
LSAMP-205ENST00000490035 ADCY6O43306 1168 aa8.97□□□□□ -0.97
LSAMP-205ENST00000490035 MYBL2P10244 700 aa8.97□□□□□ -0.97
LSAMP-205ENST00000490035 KDELR1P24390 212 aa8.97□□□□□ -0.97
LSAMP-205ENST00000490035 DPYSL3Q14195 570 aa8.97□□□□□ -0.97
LSAMP-205ENST00000490035 ANXA8L1Q5VT79 327 aa8.97□□□□□ -0.97
LSAMP-205ENST00000490035 ANKZF1Q9H8Y5 726 aa8.97□□□□□ -0.97
LSAMP-205ENST00000490035 CBX4O00257 560 aa8.97□□□□□ -0.97
LSAMP-205ENST00000490035 TAF4O00268 1085 aa8.97□□□□□ -0.97
LSAMP-205ENST00000490035 MRASO14807 208 aa8.97□□□□□ -0.97
LSAMP-205ENST00000490035 CSH1P0DML2 217 aa8.97□□□□□ -0.97
LSAMP-205ENST00000490035 CSH2P0DML3 217 aa8.97□□□□□ -0.97
LSAMP-205ENST00000490035 ATP4AP20648 1035 aa8.97□□□□□ -0.97
LSAMP-205ENST00000490035 MIB1Q86YT6 1006 aa8.97□□□□□ -0.97
LSAMP-205ENST00000490035 PDCD2LQ9BRP1 358 aa8.97□□□□□ -0.97
LSAMP-205ENST00000490035 ATP13A3Q9H7F0 1226 aa8.97□□□□□ -0.97
LSAMP-205ENST00000490035 KCTD5Q9NXV2 234 aa8.97□□□□□ -0.97
LSAMP-205ENST00000490035 SNPHO15079 494 aa8.96□□□□□ -0.97
LSAMP-205ENST00000490035 PARNO95453 639 aaKnown RBP8.96□□□□□ -0.97
LSAMP-205ENST00000490035 LTFP02788 710 aa8.96□□□□□ -0.97
LSAMP-205ENST00000490035 CYP1A2P05177 515 aa8.96□□□□□ -0.97
LSAMP-205ENST00000490035 HSMCR30P0CW71 290 aa8.96□□□□□ -0.97
LSAMP-205ENST00000490035 ARP10275 920 aa8.96□□□□□ -0.97
LSAMP-205ENST00000490035 COL6A2P12110 1019 aa8.96□□□□□ -0.97
LSAMP-205ENST00000490035 PTX3P26022 381 aaPredicted RBP8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms