RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 PDFQ9HBH1 243 aa22.08■■□□□ 1.12
SMC4-221ENST00000489573 GLOD4Q9HC38 313 aa22.08■■□□□ 1.12
SMC4-221ENST00000489573 ATP13A1Q9HD20 1204 aa22.08■■□□□ 1.12
SMC4-221ENST00000489573 NUP210Q8TEM1 1887 aaPredicted RBP22.07■■□□□ 1.12
SMC4-221ENST00000489573 CACNG3O60359 315 aa22.07■■□□□ 1.12
SMC4-221ENST00000489573 MMP13P45452 471 aa22.07■■□□□ 1.12
SMC4-221ENST00000489573 SARNPP82979 210 aaKnown RBP22.07■■□□□ 1.12
SMC4-221ENST00000489573 TNK2Q07912 1038 aa22.07■■□□□ 1.12
SMC4-221ENST00000489573 PDIA2Q13087 525 aaKnown RBP22.07■■□□□ 1.12
SMC4-221ENST00000489573 FNBP1LQ5T0N5 605 aa22.07■■□□□ 1.12
SMC4-221ENST00000489573 RNF43Q68DV7 783 aa22.07■■□□□ 1.12
SMC4-221ENST00000489573 MTERF4Q7Z6M4 381 aaKnown RBP22.07■■□□□ 1.12
SMC4-221ENST00000489573 TEX26Q8N6G2 289 aa22.07■■□□□ 1.12
SMC4-221ENST00000489573 PDCD7Q8N8D1 485 aaKnown RBP22.07■■□□□ 1.12
SMC4-221ENST00000489573 KIAA1958Q8N8K9 716 aa22.07■■□□□ 1.12
SMC4-221ENST00000489573 FGF13Q92913 245 aa22.07■■□□□ 1.12
SMC4-221ENST00000489573 SERPINB12Q96P63 405 aa22.07■■□□□ 1.12
SMC4-221ENST00000489573 EPB41L4BQ9H329 900 aa22.07■■□□□ 1.12
SMC4-221ENST00000489573 GDE1Q9NZC3 331 aa22.07■■□□□ 1.12
SMC4-221ENST00000489573 CDH22Q9UJ99 828 aa22.07■■□□□ 1.12
SMC4-221ENST00000489573 TTLL3Q9Y4R7 772 aa22.07■■□□□ 1.12
SMC4-221ENST00000489573 CHD5Q8TDI0 1954 aa22.06■■□□□ 1.12
SMC4-221ENST00000489573 GOLGA6BA6NDN3 693 aa22.06■■□□□ 1.12
SMC4-221ENST00000489573 E7ESA3 106 aa22.06■■□□□ 1.12
SMC4-221ENST00000489573 SLC9A3R1O14745 358 aaPredicted RBP22.06■■□□□ 1.12
SMC4-221ENST00000489573 MAGEA4P43358 317 aa22.06■■□□□ 1.12
SMC4-221ENST00000489573 IFNAR2P48551 515 aa22.06■■□□□ 1.12
SMC4-221ENST00000489573 SLC10A7Q0GE19 358 aa22.06■■□□□ 1.12
SMC4-221ENST00000489573 FSCBQ5H9T9 825 aa22.06■■□□□ 1.12
SMC4-221ENST00000489573 FYB2Q5VWT5 728 aa22.06■■□□□ 1.12
SMC4-221ENST00000489573 OTOP3Q7RTS5 596 aa22.06■■□□□ 1.12
SMC4-221ENST00000489573 WFDC5Q8TCV5 224 aa22.06■■□□□ 1.12
SMC4-221ENST00000489573 ASB16Q96NS5 453 aa22.06■■□□□ 1.12
SMC4-221ENST00000489573 PPP1R2P1Q96PQ5 205 aa22.06■■□□□ 1.12
SMC4-221ENST00000489573 FCRL5Q96RD9 977 aa22.06■■□□□ 1.12
SMC4-221ENST00000489573 TTYH1Q9H313 450 aaPredicted RBP22.06■■□□□ 1.12
SMC4-221ENST00000489573 PLK2Q9NYY3 685 aa22.06■■□□□ 1.12
SMC4-221ENST00000489573 NINJ2Q9NZG7 142 aa22.06■■□□□ 1.12
SMC4-221ENST00000489573 CLEC1BQ9P126 229 aa22.06■■□□□ 1.12
SMC4-221ENST00000489573 MYO9BQ13459 2157 aa22.06■■□□□ 1.12
SMC4-221ENST00000489573 GOLGA6CA6NDK9 693 aa22.05■■□□□ 1.12
SMC4-221ENST00000489573 ERI2A8K979 691 aaKnown RBP22.05■■□□□ 1.12
SMC4-221ENST00000489573 RIPK2O43353 540 aa22.05■■□□□ 1.12
SMC4-221ENST00000489573 AP2A1O95782 977 aa22.05■■□□□ 1.12
SMC4-221ENST00000489573 GOLGA6DP0CG33 693 aa22.05■■□□□ 1.12
SMC4-221ENST00000489573 CBLBQ13191 982 aa22.05■■□□□ 1.12
SMC4-221ENST00000489573 LBRQ14739 615 aaKnown RBP22.05■■□□□ 1.12
SMC4-221ENST00000489573 BBS9Q3SYG4 887 aa22.05■■□□□ 1.12
SMC4-221ENST00000489573 MSS51Q4VC12 460 aa22.05■■□□□ 1.12
SMC4-221ENST00000489573 FAM78AQ5JUQ0 283 aa22.05■■□□□ 1.12
SMC4-221ENST00000489573 DENND2CQ68D51 928 aa22.05■■□□□ 1.12
SMC4-221ENST00000489573 ZNF534Q76KX8 674 aa22.05■■□□□ 1.12
SMC4-221ENST00000489573 KLHDC8BQ8IXV7 354 aa22.05■■□□□ 1.12
SMC4-221ENST00000489573 IQCKQ8N0W5 287 aa22.05■■□□□ 1.12
SMC4-221ENST00000489573 SMARCD2Q92925 531 aa22.05■■□□□ 1.12
SMC4-221ENST00000489573 ZIM3Q96PE6 472 aa22.05■■□□□ 1.12
SMC4-221ENST00000489573 MLPHQ9BV36 600 aaPredicted RBP22.05■■□□□ 1.12
SMC4-221ENST00000489573 XAB2Q9HCS7 855 aaKnown RBP22.05■■□□□ 1.12
SMC4-221ENST00000489573 GOLGA6AQ9NYA3 693 aa22.05■■□□□ 1.12
SMC4-221ENST00000489573 UBA2Q9UBT2 640 aaPredicted RBP22.05■■□□□ 1.12
SMC4-221ENST00000489573 PLAAQ9Y263 795 aa22.05■■□□□ 1.12
SMC4-221ENST00000489573 MTCH2Q9Y6C9 303 aa22.05■■□□□ 1.12
SMC4-221ENST00000489573 WNT6Q9Y6F9 365 aa22.05■■□□□ 1.12
SMC4-221ENST00000489573 ALOX15BO15296 676 aa22.04■■□□□ 1.12
SMC4-221ENST00000489573 PSMD3O43242 534 aa22.04■■□□□ 1.12
SMC4-221ENST00000489573 PENKP01210 267 aaPredicted RBP22.04■■□□□ 1.12
SMC4-221ENST00000489573 MZF1P28698 734 aaPredicted RBP22.04■■□□□ 1.12
SMC4-221ENST00000489573 CSKP41240 450 aa22.04■■□□□ 1.12
SMC4-221ENST00000489573 NUMBP49757 651 aa22.04■■□□□ 1.12
SMC4-221ENST00000489573 ATAT1Q5SQI0 421 aa22.04■■□□□ 1.12
SMC4-221ENST00000489573 CES5AQ6NT32 575 aa22.04■■□□□ 1.12
SMC4-221ENST00000489573 LEKR1Q6ZMV7 388 aa22.04■■□□□ 1.12
SMC4-221ENST00000489573 CAND1Q86VP6 1230 aaKnown RBP22.04■■□□□ 1.12
SMC4-221ENST00000489573 ZBED8Q8IZ13 594 aa22.04■■□□□ 1.12
SMC4-221ENST00000489573 FIBINQ8TAL6 211 aa22.04■■□□□ 1.12
SMC4-221ENST00000489573 IRF7Q92985 503 aa22.04■■□□□ 1.12
SMC4-221ENST00000489573 C9orf72Q96LT7 481 aa22.04■■□□□ 1.12
SMC4-221ENST00000489573 RUFY1Q96T51 708 aa22.04■■□□□ 1.12
SMC4-221ENST00000489573 FEM1AQ9BSK4 669 aa22.04■■□□□ 1.12
SMC4-221ENST00000489573 LINC00597Q9H2U6 94 aa22.04■■□□□ 1.12
SMC4-221ENST00000489573 NT5MQ9NPB1 228 aa22.04■■□□□ 1.12
SMC4-221ENST00000489573 SPHK2Q9NRA0 654 aa22.04■■□□□ 1.12
SMC4-221ENST00000489573 OR51B4Q9Y5P0 310 aa22.04■■□□□ 1.12
SMC4-221ENST00000489573 CBX4O00257 560 aa22.04■■□□□ 1.12
SMC4-221ENST00000489573 TBX10O75333 385 aa22.04■■□□□ 1.12
SMC4-221ENST00000489573 BANF1O75531 89 aa22.04■■□□□ 1.12
SMC4-221ENST00000489573 ANXA9O76027 345 aa22.04■■□□□ 1.12
SMC4-221ENST00000489573 TTC4O95801 387 aa22.04■■□□□ 1.12
SMC4-221ENST00000489573 MLNP12872 115 aa22.04■■□□□ 1.12
SMC4-221ENST00000489573 GLDCP23378 1020 aa22.04■■□□□ 1.12
SMC4-221ENST00000489573 ZNF235Q14590 738 aa22.04■■□□□ 1.12
SMC4-221ENST00000489573 RFTN1Q14699 578 aaPredicted RBP22.04■■□□□ 1.12
SMC4-221ENST00000489573 GRIN2CQ14957 1233 aa22.04■■□□□ 1.12
SMC4-221ENST00000489573 FASTKD3Q14CZ7 662 aaKnown RBP22.04■■□□□ 1.12
SMC4-221ENST00000489573 KYNUQ16719 465 aa22.04■■□□□ 1.12
SMC4-221ENST00000489573 DNAJC21Q5F1R6 531 aaKnown RBP22.04■■□□□ 1.12
SMC4-221ENST00000489573 KCTD11Q693B1 232 aa22.04■■□□□ 1.12
SMC4-221ENST00000489573 TMEM25Q86YD3 366 aa22.04■■□□□ 1.12
SMC4-221ENST00000489573 BBS5Q8N3I7 341 aa22.04■■□□□ 1.12
SMC4-221ENST00000489573 RSPRY1Q96DX4 576 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms