RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 ZMPSTE24O75844 475 aa12.56□□□□□ -0.4
TRAIP-209ENST00000488860 ASLP04424 464 aa12.56□□□□□ -0.4
TRAIP-209ENST00000488860 DRD1P21728 446 aa12.56□□□□□ -0.4
TRAIP-209ENST00000488860 CCNCP24863 283 aa12.56□□□□□ -0.4
TRAIP-209ENST00000488860 RBL1P28749 1068 aa12.56□□□□□ -0.4
TRAIP-209ENST00000488860 TIE1P35590 1138 aa12.56□□□□□ -0.4
TRAIP-209ENST00000488860 SERPINH1P50454 418 aaKnown RBP12.56□□□□□ -0.4
TRAIP-209ENST00000488860 CLCN6P51797 869 aa12.56□□□□□ -0.4
TRAIP-209ENST00000488860 GEMIN4P57678 1058 aaKnown RBP12.56□□□□□ -0.4
TRAIP-209ENST00000488860 ST8SIA6P61647 398 aa12.56□□□□□ -0.4
TRAIP-209ENST00000488860 ZXDAP98168 799 aa12.56□□□□□ -0.4
TRAIP-209ENST00000488860 TUBB2AQ13885 445 aa12.56□□□□□ -0.4
TRAIP-209ENST00000488860 BYSLQ13895 437 aaKnown RBP12.56□□□□□ -0.4
TRAIP-209ENST00000488860 ZNF235Q14590 738 aa12.56□□□□□ -0.4
TRAIP-209ENST00000488860 UBXN2BQ14CS0 331 aa12.56□□□□□ -0.4
TRAIP-209ENST00000488860 CCNG2Q16589 344 aa12.56□□□□□ -0.4
TRAIP-209ENST00000488860 TMEM196Q5HYL7 178 aa12.56□□□□□ -0.4
TRAIP-209ENST00000488860 FAM182AQ5T1J6 154 aa12.56□□□□□ -0.4
TRAIP-209ENST00000488860 TMCO4Q5TGY1 634 aa12.56□□□□□ -0.4
TRAIP-209ENST00000488860 EGFLAMQ63HQ2 1017 aa12.56□□□□□ -0.4
TRAIP-209ENST00000488860 LRRC49Q8IUZ0 686 aa12.56□□□□□ -0.4
TRAIP-209ENST00000488860 KLHL7Q8IXQ5 586 aa12.56□□□□□ -0.4
TRAIP-209ENST00000488860 SLC35B2Q8TB61 432 aa12.56□□□□□ -0.4
TRAIP-209ENST00000488860 TTC17Q96AE7 1141 aa12.56□□□□□ -0.4
TRAIP-209ENST00000488860 ACDQ96AP0 544 aa12.56□□□□□ -0.4
TRAIP-209ENST00000488860 SHDQ96IW2 340 aa12.56□□□□□ -0.4
TRAIP-209ENST00000488860 FERMT1Q9BQL6 677 aa12.56□□□□□ -0.4
TRAIP-209ENST00000488860 TMEM121Q9BTD3 319 aa12.56□□□□□ -0.4
TRAIP-209ENST00000488860 TUBB2BQ9BVA1 445 aa12.56□□□□□ -0.4
TRAIP-209ENST00000488860 CINPQ9BW66 212 aaPredicted RBP12.56□□□□□ -0.4
TRAIP-209ENST00000488860 BRD8Q9H0E9 1235 aa12.56□□□□□ -0.4
TRAIP-209ENST00000488860 HOMER3Q9NSC5 361 aa12.56□□□□□ -0.4
TRAIP-209ENST00000488860 ELOVL2Q9NXB9 296 aa12.56□□□□□ -0.4
TRAIP-209ENST00000488860 ZNF148Q9UQR1 794 aa12.56□□□□□ -0.4
TRAIP-209ENST00000488860 FCF1Q9Y324 198 aaKnown RBP12.56□□□□□ -0.4
TRAIP-209ENST00000488860 ANTXRLA6NF34 631 aa12.55□□□□□ -0.4
TRAIP-209ENST00000488860 K7EQS6 105 aa12.55□□□□□ -0.4
TRAIP-209ENST00000488860 RNF103O00237 685 aa12.55□□□□□ -0.4
TRAIP-209ENST00000488860 MATN3O15232 486 aa12.55□□□□□ -0.4
TRAIP-209ENST00000488860 BNIP3LO60238 219 aa12.55□□□□□ -0.4
TRAIP-209ENST00000488860 STK10O94804 968 aaKnown RBP12.55□□□□□ -0.4
TRAIP-209ENST00000488860 TMCC1O94876 653 aa12.55□□□□□ -0.4
TRAIP-209ENST00000488860 DLDP09622 509 aaKnown RBP12.55□□□□□ -0.4
TRAIP-209ENST00000488860 TARSP26639 723 aaKnown RBP12.55□□□□□ -0.4
TRAIP-209ENST00000488860 NNMTP40261 264 aa12.55□□□□□ -0.4
TRAIP-209ENST00000488860 TNFRSF4P43489 277 aa12.55□□□□□ -0.4
TRAIP-209ENST00000488860 KCNJ1P48048 391 aa12.55□□□□□ -0.4
TRAIP-209ENST00000488860 ZBTB17Q13105 803 aa12.55□□□□□ -0.4
TRAIP-209ENST00000488860 ZNF234Q14588 700 aa12.55□□□□□ -0.4
TRAIP-209ENST00000488860 LBRQ14739 615 aaKnown RBP12.55□□□□□ -0.4
TRAIP-209ENST00000488860 ACCSLQ4AC99 568 aa12.55□□□□□ -0.4
TRAIP-209ENST00000488860 TTC27Q6P3X3 843 aa12.55□□□□□ -0.4
TRAIP-209ENST00000488860 CCDC137Q6PK04 289 aaKnown RBP12.55□□□□□ -0.4
TRAIP-209ENST00000488860 GSTA5Q7RTV2 222 aa12.55□□□□□ -0.4
TRAIP-209ENST00000488860 BBS5Q8N3I7 341 aa12.55□□□□□ -0.4
TRAIP-209ENST00000488860 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.55□□□□□ -0.4
TRAIP-209ENST00000488860 ZNF513Q8N8E2 541 aaPredicted RBP12.55□□□□□ -0.4
TRAIP-209ENST00000488860 C12orf50Q8NA57 414 aaPredicted RBP12.55□□□□□ -0.4
TRAIP-209ENST00000488860 HTR3CQ8WXA8 447 aa12.55□□□□□ -0.4
TRAIP-209ENST00000488860 EZH1Q92800 747 aaPredicted RBP12.55□□□□□ -0.4
TRAIP-209ENST00000488860 ERLEC1Q96DZ1 483 aa12.55□□□□□ -0.4
TRAIP-209ENST00000488860 EXOC2Q96KP1 924 aa12.55□□□□□ -0.4
TRAIP-209ENST00000488860 TSGA13Q96PP4 275 aa12.55□□□□□ -0.4
TRAIP-209ENST00000488860 FOXQ1Q9C009 403 aa12.55□□□□□ -0.4
TRAIP-209ENST00000488860 DDX47Q9H0S4 455 aaKnown RBP12.55□□□□□ -0.4
TRAIP-209ENST00000488860 MFSD1Q9H3U5 465 aa12.55□□□□□ -0.4
TRAIP-209ENST00000488860 TBC1D17Q9HA65 648 aa12.55□□□□□ -0.4
TRAIP-209ENST00000488860 RBM12Q9NTZ6 932 aaKnown RBP12.55□□□□□ -0.4
TRAIP-209ENST00000488860 KLHL8Q9P2G9 620 aaPredicted RBP12.55□□□□□ -0.4
TRAIP-209ENST00000488860 PLA2G4CQ9UP65 541 aa12.55□□□□□ -0.4
TRAIP-209ENST00000488860 MRPS17Q9Y2R5 130 aaKnown RBP12.55□□□□□ -0.4
TRAIP-209ENST00000488860 F5P12259 2224 aa12.54□□□□□ -0.4
TRAIP-209ENST00000488860 BCLAF3A2AJT9 711 aaKnown RBP12.54□□□□□ -0.4
TRAIP-209ENST00000488860 CFAP69A5D8W1 941 aa12.54□□□□□ -0.4
TRAIP-209ENST00000488860 SHISA7A6NL88 538 aa12.54□□□□□ -0.4
TRAIP-209ENST00000488860 F5H423 210 aaPredicted RBP12.54□□□□□ -0.4
TRAIP-209ENST00000488860 CCDC188H7C350 402 aa12.54□□□□□ -0.4
TRAIP-209ENST00000488860 K7ERQ8 282 aa12.54□□□□□ -0.4
TRAIP-209ENST00000488860 DCXO43602 365 aa12.54□□□□□ -0.4
TRAIP-209ENST00000488860 TIMM44O43615 452 aa12.54□□□□□ -0.4
TRAIP-209ENST00000488860 RNF40O75150 1001 aa12.54□□□□□ -0.4
TRAIP-209ENST00000488860 MT-CO1P00395 513 aa12.54□□□□□ -0.4
TRAIP-209ENST00000488860 IFNB1P01574 187 aa12.54□□□□□ -0.4
TRAIP-209ENST00000488860 SRPRAP08240 638 aaKnown RBP12.54□□□□□ -0.4
TRAIP-209ENST00000488860 SRCP12931 536 aa12.54□□□□□ -0.4
TRAIP-209ENST00000488860 CCNB1P14635 433 aa12.54□□□□□ -0.4
TRAIP-209ENST00000488860 COILP38432 576 aaPredicted RBP12.54□□□□□ -0.4
TRAIP-209ENST00000488860 WASP42768 502 aa12.54□□□□□ -0.4
TRAIP-209ENST00000488860 MMP13P45452 471 aa12.54□□□□□ -0.4
TRAIP-209ENST00000488860 NRLP54845 237 aa12.54□□□□□ -0.4
TRAIP-209ENST00000488860 GDF10P55107 478 aa12.54□□□□□ -0.4
TRAIP-209ENST00000488860 RHOAP61586 193 aa12.54□□□□□ -0.4
TRAIP-209ENST00000488860 ITKQ08881 620 aa12.54□□□□□ -0.4
TRAIP-209ENST00000488860 SLC10A7Q0GE19 358 aa12.54□□□□□ -0.4
TRAIP-209ENST00000488860 LRRC32Q14392 662 aa12.54□□□□□ -0.4
TRAIP-209ENST00000488860 OASLQ15646 514 aaKnown RBP12.54□□□□□ -0.4
TRAIP-209ENST00000488860 CYP1B1Q16678 543 aa12.54□□□□□ -0.4
TRAIP-209ENST00000488860 PTPRNQ16849 979 aa12.54□□□□□ -0.4
TRAIP-209ENST00000488860 KCTD19Q17RG1 926 aaPredicted RBP12.54□□□□□ -0.4
TRAIP-209ENST00000488860 C2orf27AQ580R0 203 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms