RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 CLPXO76031 633 aa16.45■□□□□ 0.22
MCF2L-229ENST00000488765 IRF9Q00978 393 aa16.45■□□□□ 0.22
MCF2L-229ENST00000488765 ATAD3BQ5T9A4 648 aa16.45■□□□□ 0.22
MCF2L-229ENST00000488765 RALGPS2Q86X27 583 aaPredicted RBP16.45■□□□□ 0.22
MCF2L-229ENST00000488765 MAGEE2Q8TD90 523 aaPredicted RBP16.45■□□□□ 0.22
MCF2L-229ENST00000488765 CPB2Q96IY4 423 aa16.45■□□□□ 0.22
MCF2L-229ENST00000488765 TMEM206Q9H813 350 aa16.45■□□□□ 0.22
MCF2L-229ENST00000488765 COPG2Q9UBF2 871 aa16.45■□□□□ 0.22
MCF2L-229ENST00000488765 CNOT6Q9ULM6 557 aaKnown RBP16.45■□□□□ 0.22
MCF2L-229ENST00000488765 JRKO75564 520 aa16.45■□□□□ 0.22
MCF2L-229ENST00000488765 ERVK-10P10266 1014 aa16.45■□□□□ 0.22
MCF2L-229ENST00000488765 ARPP19P56211 112 aa16.45■□□□□ 0.22
MCF2L-229ENST00000488765 TUBA4AP68366 448 aa16.45■□□□□ 0.22
MCF2L-229ENST00000488765 TREML2Q5T2D2 321 aa16.45■□□□□ 0.22
MCF2L-229ENST00000488765 ZNF606Q8WXB4 792 aa16.45■□□□□ 0.22
MCF2L-229ENST00000488765 TFAP2CQ92754 450 aa16.45■□□□□ 0.22
MCF2L-229ENST00000488765 ADI1Q9BV57 179 aa16.45■□□□□ 0.22
MCF2L-229ENST00000488765 ABCB10Q9NRK6 738 aa16.45■□□□□ 0.22
MCF2L-229ENST00000488765 AASDHPPTQ9NRN7 309 aa16.45■□□□□ 0.22
MCF2L-229ENST00000488765 PRORSD1PA6NEY8 169 aa16.44■□□□□ 0.22
MCF2L-229ENST00000488765 HNRNPDLO14979 420 aaKnown RBP16.44■□□□□ 0.22
MCF2L-229ENST00000488765 AXIN1O15169 862 aa16.44■□□□□ 0.22
MCF2L-229ENST00000488765 IL18RAPO95256 599 aa16.44■□□□□ 0.22
MCF2L-229ENST00000488765 HLA-DRAP01903 254 aa16.44■□□□□ 0.22
MCF2L-229ENST00000488765 BMPR1AP36894 532 aa16.44■□□□□ 0.22
MCF2L-229ENST00000488765 OLIG2Q13516 323 aa16.44■□□□□ 0.22
MCF2L-229ENST00000488765 MAPRE1Q15691 268 aaKnown RBP16.44■□□□□ 0.22
MCF2L-229ENST00000488765 OTUD3Q5T2D3 398 aaPredicted RBP16.44■□□□□ 0.22
MCF2L-229ENST00000488765 EPGNQ6UW88 154 aa16.44■□□□□ 0.22
MCF2L-229ENST00000488765 IFNEQ86WN2 208 aa16.44■□□□□ 0.22
MCF2L-229ENST00000488765 CNDP1Q96KN2 507 aa16.44■□□□□ 0.22
MCF2L-229ENST00000488765 APOBEC3GQ9HC16 384 aaKnown RBP16.44■□□□□ 0.22
MCF2L-229ENST00000488765 KIF13BQ9NQT8 1826 aa16.44■□□□□ 0.22
MCF2L-229ENST00000488765 GARTP22102 1010 aa16.44■□□□□ 0.22
MCF2L-229ENST00000488765 KDELR1P24390 212 aa16.44■□□□□ 0.22
MCF2L-229ENST00000488765 IQSEC1Q6DN90 963 aa16.44■□□□□ 0.22
MCF2L-229ENST00000488765 SCYL2Q6P3W7 929 aa16.44■□□□□ 0.22
MCF2L-229ENST00000488765 PSMA8Q8TAA3 256 aa16.44■□□□□ 0.22
MCF2L-229ENST00000488765 HM13Q8TCT9 377 aa16.44■□□□□ 0.22
MCF2L-229ENST00000488765 BEGAINQ9BUH8 593 aa16.44■□□□□ 0.22
MCF2L-229ENST00000488765 SCHIP1Q9P0W5 487 aaPredicted RBP16.44■□□□□ 0.22
MCF2L-229ENST00000488765 SEL1LQ9UBV2 794 aa16.44■□□□□ 0.22
MCF2L-229ENST00000488765 PRELPP51888 382 aa16.43■□□□□ 0.22
MCF2L-229ENST00000488765 NSUN2Q08J23 767 aaKnown RBP eCLIP16.43■□□□□ 0.22
MCF2L-229ENST00000488765 GATAD2AQ86YP4 633 aa16.43■□□□□ 0.22
MCF2L-229ENST00000488765 CITED4Q96RK1 184 aa16.43■□□□□ 0.22
MCF2L-229ENST00000488765 PIF1Q9H611 641 aa16.43■□□□□ 0.22
MCF2L-229ENST00000488765 EFCAB1Q9HAE3 211 aa16.43■□□□□ 0.22
MCF2L-229ENST00000488765 XPNPEP3Q9NQH7 507 aa16.43■□□□□ 0.22
MCF2L-229ENST00000488765 DNMT3BQ9UBC3 853 aaKnown RBP16.43■□□□□ 0.22
MCF2L-229ENST00000488765 CDH7Q9ULB5 785 aa16.43■□□□□ 0.22
MCF2L-229ENST00000488765 UGT2A1Q9Y4X1 527 aa16.43■□□□□ 0.22
MCF2L-229ENST00000488765 PCDHGA7Q9Y5G6 932 aa16.43■□□□□ 0.22
MCF2L-229ENST00000488765 NFASCO94856 1347 aa16.43■□□□□ 0.22
MCF2L-229ENST00000488765 UBE4BO95155 1302 aa16.43■□□□□ 0.22
MCF2L-229ENST00000488765 PCM1Q15154 2024 aa16.43■□□□□ 0.22
MCF2L-229ENST00000488765 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.43■□□□□ 0.22
MCF2L-229ENST00000488765 LRCH4O75427 683 aa16.43■□□□□ 0.22
MCF2L-229ENST00000488765 DDX5P17844 614 aaKnown RBP16.43■□□□□ 0.22
MCF2L-229ENST00000488765 PSME3P61289 254 aa16.43■□□□□ 0.22
MCF2L-229ENST00000488765 PRPSAP1Q14558 356 aa16.43■□□□□ 0.22
MCF2L-229ENST00000488765 POLD3Q15054 466 aaPredicted RBP16.43■□□□□ 0.22
MCF2L-229ENST00000488765 NFIL3Q16649 462 aa16.43■□□□□ 0.22
MCF2L-229ENST00000488765 MMAAQ8IVH4 418 aaKnown RBP16.43■□□□□ 0.22
MCF2L-229ENST00000488765 LILRB4Q8NHJ6 448 aa16.43■□□□□ 0.22
MCF2L-229ENST00000488765 SH3YL1Q96HL8 342 aaPredicted RBP16.43■□□□□ 0.22
MCF2L-229ENST00000488765 C1orf50Q9BV19 199 aa16.43■□□□□ 0.22
MCF2L-229ENST00000488765 ANKRD60Q9BZ19 345 aa16.43■□□□□ 0.22
MCF2L-229ENST00000488765 C3orf70A6NLC5 250 aaPredicted RBP16.43■□□□□ 0.22
MCF2L-229ENST00000488765 H0Y858 1186 aa16.43■□□□□ 0.22
MCF2L-229ENST00000488765 SYNCRIPO60506 623 aaKnown RBP16.43■□□□□ 0.22
MCF2L-229ENST00000488765 IST1P53990 364 aa16.43■□□□□ 0.22
MCF2L-229ENST00000488765 CDH6P55285 790 aa16.43■□□□□ 0.22
MCF2L-229ENST00000488765 PHC1P78364 1004 aa16.43■□□□□ 0.22
MCF2L-229ENST00000488765 ZNF772Q68DY9 489 aaPredicted RBP16.43■□□□□ 0.22
MCF2L-229ENST00000488765 RPS27LQ71UM5 84 aaKnown RBP16.43■□□□□ 0.22
MCF2L-229ENST00000488765 SLC43A3Q8NBI5 491 aa16.43■□□□□ 0.22
MCF2L-229ENST00000488765 OR2T3Q8NH03 318 aa16.43■□□□□ 0.22
MCF2L-229ENST00000488765 SNX19Q92543 992 aa16.43■□□□□ 0.22
MCF2L-229ENST00000488765 COQ3Q9NZJ6 369 aa16.43■□□□□ 0.22
MCF2L-229ENST00000488765 FBXO9Q9UK97 447 aaPredicted RBP16.43■□□□□ 0.22
MCF2L-229ENST00000488765 PRPF19Q9UMS4 504 aaKnown RBP16.43■□□□□ 0.22
MCF2L-229ENST00000488765 OAZ3Q9UMX2 235 aa16.43■□□□□ 0.22
MCF2L-229ENST00000488765 PTPRJQ12913 1337 aa16.42■□□□□ 0.22
MCF2L-229ENST00000488765 C9IYK1 514 aa16.42■□□□□ 0.22
MCF2L-229ENST00000488765 GNL1P36915 607 aaPredicted RBP16.42■□□□□ 0.22
MCF2L-229ENST00000488765 SREBF1P36956 1147 aa16.42■□□□□ 0.22
MCF2L-229ENST00000488765 OCA2Q04671 838 aa16.42■□□□□ 0.22
MCF2L-229ENST00000488765 MERTKQ12866 999 aa16.42■□□□□ 0.22
MCF2L-229ENST00000488765 GLRA4Q5JXX5 417 aa16.42■□□□□ 0.22
MCF2L-229ENST00000488765 TMEM236Q5W0B7 351 aa16.42■□□□□ 0.22
MCF2L-229ENST00000488765 C4orf22Q6V702 233 aa16.42■□□□□ 0.22
MCF2L-229ENST00000488765 SAMD7Q7Z3H4 446 aa16.42■□□□□ 0.22
MCF2L-229ENST00000488765 SPPL2CQ8IUH8 684 aa16.42■□□□□ 0.22
MCF2L-229ENST00000488765 TMEM130Q8N3G9 435 aa16.42■□□□□ 0.22
MCF2L-229ENST00000488765 CCNYL1Q8N7R7 359 aa16.42■□□□□ 0.22
MCF2L-229ENST00000488765 FLAD1Q8NFF5 587 aa16.42■□□□□ 0.22
MCF2L-229ENST00000488765 SUN5Q8TC36 379 aa16.42■□□□□ 0.22
MCF2L-229ENST00000488765 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.42■□□□□ 0.22
MCF2L-229ENST00000488765 FIG4Q92562 907 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms