RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 ARL13AQ5H913 290 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P36-201ENST00000487709 FAM171A1Q5VUB5 890 aa4.08□□□□□ -1.76
HMGB1P36-201ENST00000487709 TMEM268Q5VZI3 342 aa4.08□□□□□ -1.76
HMGB1P36-201ENST00000487709 SLC30A9Q6PML9 568 aa4.08□□□□□ -1.76
HMGB1P36-201ENST00000487709 ZNF474Q6S9Z5 364 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P36-201ENST00000487709 KIAA1324Q6UXG2 1013 aaKnown RBP4.08□□□□□ -1.76
HMGB1P36-201ENST00000487709 C9orf47Q6ZRZ4 202 aa4.08□□□□□ -1.76
HMGB1P36-201ENST00000487709 RRM2BQ7LG56 351 aa4.08□□□□□ -1.76
HMGB1P36-201ENST00000487709 ADGRG6Q86SQ4 1221 aa4.08□□□□□ -1.76
HMGB1P36-201ENST00000487709 GHDCQ8N2G8 530 aa4.08□□□□□ -1.76
HMGB1P36-201ENST00000487709 DPP10Q8N608 796 aa4.08□□□□□ -1.76
HMGB1P36-201ENST00000487709 TNIP2Q8NFZ5 429 aa4.08□□□□□ -1.76
HMGB1P36-201ENST00000487709 RFWD2Q8NHY2 731 aa4.08□□□□□ -1.76
HMGB1P36-201ENST00000487709 CENPIQ92674 756 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P36-201ENST00000487709 MASTLQ96GX5 879 aa4.08□□□□□ -1.76
HMGB1P36-201ENST00000487709 LYZL4Q96KX0 146 aa4.08□□□□□ -1.76
HMGB1P36-201ENST00000487709 EIF2AK1Q9BQI3 630 aaKnown RBP4.08□□□□□ -1.76
HMGB1P36-201ENST00000487709 SLC26A6Q9BXS9 759 aa4.08□□□□□ -1.76
HMGB1P36-201ENST00000487709 PDCL3Q9H2J4 239 aa4.08□□□□□ -1.76
HMGB1P36-201ENST00000487709 HIPK2Q9H2X6 1198 aa4.08□□□□□ -1.76
HMGB1P36-201ENST00000487709 TTC12Q9H892 705 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P36-201ENST00000487709 UBN1Q9NPG3 1134 aa4.08□□□□□ -1.76
HMGB1P36-201ENST00000487709 OSGIN2Q9Y236 505 aa4.08□□□□□ -1.76
HMGB1P36-201ENST00000487709 FAM90A8PA6NJQ4 464 aa4.07□□□□□ -1.76
HMGB1P36-201ENST00000487709 TTC36A6NLP5 189 aa4.07□□□□□ -1.76
HMGB1P36-201ENST00000487709 TULP3O75386 442 aa4.07□□□□□ -1.76
HMGB1P36-201ENST00000487709 CRYABP02511 175 aaKnown RBP4.07□□□□□ -1.76
HMGB1P36-201ENST00000487709 CYP21A2P08686 494 aa4.07□□□□□ -1.76
HMGB1P36-201ENST00000487709 HNRNPA1P09651 372 aaKnown RBP eCLIP4.07□□□□□ -1.76
HMGB1P36-201ENST00000487709 FAM90A13PP0C7W8 464 aa4.07□□□□□ -1.76
HMGB1P36-201ENST00000487709 FAM90A24PP0C7X0 464 aa4.07□□□□□ -1.76
HMGB1P36-201ENST00000487709 KCNJ4P48050 445 aa4.07□□□□□ -1.76
HMGB1P36-201ENST00000487709 SOX2P48431 317 aa4.07□□□□□ -1.76
HMGB1P36-201ENST00000487709 RPP30P78346 268 aaKnown RBP4.07□□□□□ -1.76
HMGB1P36-201ENST00000487709 NAA25Q14CX7 972 aa4.07□□□□□ -1.76
HMGB1P36-201ENST00000487709 NFIL3Q16649 462 aa4.07□□□□□ -1.76
HMGB1P36-201ENST00000487709 LEXMQ3ZCV2 418 aa4.07□□□□□ -1.76
HMGB1P36-201ENST00000487709 TTC39AQ5SRH9 613 aa4.07□□□□□ -1.76
HMGB1P36-201ENST00000487709 C10orf25Q5T742 122 aa4.07□□□□□ -1.76
HMGB1P36-201ENST00000487709 MEX3CQ5U5Q3 659 aaKnown RBP4.07□□□□□ -1.76
HMGB1P36-201ENST00000487709 FAAH2Q6GMR7 532 aa4.07□□□□□ -1.76
HMGB1P36-201ENST00000487709 USP43Q70EL4 1123 aa4.07□□□□□ -1.76
HMGB1P36-201ENST00000487709 TFAP2DQ7Z6R9 452 aa4.07□□□□□ -1.76
HMGB1P36-201ENST00000487709 UBE2Q1Q7Z7E8 422 aa4.07□□□□□ -1.76
HMGB1P36-201ENST00000487709 ANKRD13BQ86YJ7 626 aa4.07□□□□□ -1.76
HMGB1P36-201ENST00000487709 TMTC1Q8IUR5 882 aa4.07□□□□□ -1.76
HMGB1P36-201ENST00000487709 CPOQ8IVL8 374 aa4.07□□□□□ -1.76
HMGB1P36-201ENST00000487709 TSPYL6Q8N831 410 aa4.07□□□□□ -1.76
HMGB1P36-201ENST00000487709 IL17REQ8NFR9 667 aa4.07□□□□□ -1.76
HMGB1P36-201ENST00000487709 HTRA1Q92743 480 aa4.07□□□□□ -1.76
HMGB1P36-201ENST00000487709 HVCN1Q96D96 273 aa4.07□□□□□ -1.76
HMGB1P36-201ENST00000487709 TEFMQ96QE5 360 aaKnown RBP4.07□□□□□ -1.76
HMGB1P36-201ENST00000487709 ZNF347Q96SE7 839 aa4.07□□□□□ -1.76
HMGB1P36-201ENST00000487709 TM2D2Q9BX73 214 aa4.07□□□□□ -1.76
HMGB1P36-201ENST00000487709 HDHD5Q9BXW7 423 aa4.07□□□□□ -1.76
HMGB1P36-201ENST00000487709 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.07□□□□□ -1.76
HMGB1P36-201ENST00000487709 TAOK3Q9H2K8 898 aa4.07□□□□□ -1.76
HMGB1P36-201ENST00000487709 ACAD9Q9H845 621 aa4.07□□□□□ -1.76
HMGB1P36-201ENST00000487709 ACTR5Q9H9F9 607 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P36-201ENST00000487709 ENTPD7Q9NQZ7 604 aa4.07□□□□□ -1.76
HMGB1P36-201ENST00000487709 PPP1R14DQ9NXH3 145 aa4.07□□□□□ -1.76
HMGB1P36-201ENST00000487709 IFT80Q9P2H3 777 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P36-201ENST00000487709 FBXO40Q9UH90 709 aa4.07□□□□□ -1.76
HMGB1P36-201ENST00000487709 CD207Q9UJ71 328 aa4.07□□□□□ -1.76
HMGB1P36-201ENST00000487709 RCE1Q9Y256 329 aa4.07□□□□□ -1.76
HMGB1P36-201ENST00000487709 GOLGA6L10A0A0M3HER8 536 aa4.06□□□□□ -1.76
HMGB1P36-201ENST00000487709 SLC22A23A1A5C7 686 aa4.06□□□□□ -1.76
HMGB1P36-201ENST00000487709 SH2D7A6NKC9 451 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P36-201ENST00000487709 A6NLC8 198 aa4.06□□□□□ -1.76
HMGB1P36-201ENST00000487709 C2CD4BA6NLJ0 364 aa4.06□□□□□ -1.76
HMGB1P36-201ENST00000487709 KCNJ18B7U540 433 aa4.06□□□□□ -1.76
HMGB1P36-201ENST00000487709 GTPBP1O00178 669 aaKnown RBP4.06□□□□□ -1.76
HMGB1P36-201ENST00000487709 RHODO00212 210 aa4.06□□□□□ -1.76
HMGB1P36-201ENST00000487709 IL1AP01583 271 aa4.06□□□□□ -1.76
HMGB1P36-201ENST00000487709 HOXA7P31268 230 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P36-201ENST00000487709 GJC1P36383 396 aa4.06□□□□□ -1.76
HMGB1P36-201ENST00000487709 MVDP53602 400 aa4.06□□□□□ -1.76
HMGB1P36-201ENST00000487709 ZNF91Q05481 1191 aa4.06□□□□□ -1.76
HMGB1P36-201ENST00000487709 PMPCAQ10713 525 aa4.06□□□□□ -1.76
HMGB1P36-201ENST00000487709 DDX10Q13206 875 aaKnown RBP4.06□□□□□ -1.76
HMGB1P36-201ENST00000487709 CAMK1Q14012 370 aa4.06□□□□□ -1.76
HMGB1P36-201ENST00000487709 TWIST1Q15672 202 aa4.06□□□□□ -1.76
HMGB1P36-201ENST00000487709 SLC4A8Q2Y0W8 1093 aa4.06□□□□□ -1.76
HMGB1P36-201ENST00000487709 TTLL5Q6EMB2 1281 aa4.06□□□□□ -1.76
HMGB1P36-201ENST00000487709 Q6ZTC4 211 aa4.06□□□□□ -1.76
HMGB1P36-201ENST00000487709 MDGA2Q7Z553 956 aa4.06□□□□□ -1.76
HMGB1P36-201ENST00000487709 CCDC25Q86WR0 208 aa4.06□□□□□ -1.76
HMGB1P36-201ENST00000487709 ARMC8Q8IUR7 673 aa4.06□□□□□ -1.76
HMGB1P36-201ENST00000487709 DNAAF1Q8NEP3 725 aa4.06□□□□□ -1.76
HMGB1P36-201ENST00000487709 ZCCHC10Q8TBK6 192 aa4.06□□□□□ -1.76
HMGB1P36-201ENST00000487709 CNOT9Q92600 299 aaKnown RBP4.06□□□□□ -1.76
HMGB1P36-201ENST00000487709 MPP4Q96JB8 637 aa4.06□□□□□ -1.76
HMGB1P36-201ENST00000487709 FRG2BQ96QU4 278 aa4.06□□□□□ -1.76
HMGB1P36-201ENST00000487709 INTS2Q9H0H0 1204 aaKnown RBP4.06□□□□□ -1.76
HMGB1P36-201ENST00000487709 MROH8Q9H579 483 aa4.06□□□□□ -1.76
HMGB1P36-201ENST00000487709 TXNRD2Q9NNW7 524 aa4.06□□□□□ -1.76
HMGB1P36-201ENST00000487709 RNF146Q9NTX7 359 aa4.06□□□□□ -1.76
HMGB1P36-201ENST00000487709 TMEM45AQ9NWC5 275 aa4.06□□□□□ -1.76
HMGB1P36-201ENST00000487709 TMEM160Q9NX00 188 aa4.06□□□□□ -1.76
HMGB1P36-201ENST00000487709 CNPY2Q9Y2B0 182 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms