RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 POM121L1PQ3SYA9 428 aa20.9■□□□□ 0.94
HDAC4-209ENST00000487617 TDRD12Q587J7 1177 aaKnown RBP20.9■□□□□ 0.94
HDAC4-209ENST00000487617 PLEKHA7Q6IQ23 1121 aa20.9■□□□□ 0.94
HDAC4-209ENST00000487617 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.9■□□□□ 0.94
HDAC4-209ENST00000487617 TMC6Q7Z403 805 aa20.9■□□□□ 0.94
HDAC4-209ENST00000487617 NLRP14Q86W24 1093 aa20.9■□□□□ 0.94
HDAC4-209ENST00000487617 PYROXD2Q8N2H3 581 aa20.9■□□□□ 0.94
HDAC4-209ENST00000487617 PIP4K2CQ8TBX8 421 aa20.9■□□□□ 0.94
HDAC4-209ENST00000487617 TM9SF3Q9HD45 589 aa20.9■□□□□ 0.94
HDAC4-209ENST00000487617 NDFIP2Q9NV92 336 aa20.9■□□□□ 0.94
HDAC4-209ENST00000487617 DNAAF2Q9NVR5 837 aaKnown RBP20.9■□□□□ 0.94
HDAC4-209ENST00000487617 IFNKQ9P0W0 207 aa20.9■□□□□ 0.94
HDAC4-209ENST00000487617 DNAI1Q9UI46 699 aa20.9■□□□□ 0.94
HDAC4-209ENST00000487617 NEU3Q9UQ49 428 aa20.9■□□□□ 0.94
HDAC4-209ENST00000487617 PLK4O00444 970 aa20.89■□□□□ 0.93
HDAC4-209ENST00000487617 RTN2O75298 545 aa20.89■□□□□ 0.93
HDAC4-209ENST00000487617 ZMPSTE24O75844 475 aa20.89■□□□□ 0.93
HDAC4-209ENST00000487617 IGHV4-34P06331 123 aa20.89■□□□□ 0.93
HDAC4-209ENST00000487617 CSRP1P21291 193 aaKnown RBP20.89■□□□□ 0.93
HDAC4-209ENST00000487617 PSMA2P25787 234 aa20.89■□□□□ 0.93
HDAC4-209ENST00000487617 L1CAMP32004 1257 aa20.89■□□□□ 0.93
HDAC4-209ENST00000487617 DRD3P35462 400 aa20.89■□□□□ 0.93
HDAC4-209ENST00000487617 ACVRL1P37023 503 aa20.89■□□□□ 0.93
HDAC4-209ENST00000487617 CSNK1EP49674 416 aaKnown RBP20.89■□□□□ 0.93
HDAC4-209ENST00000487617 ADPRHP54922 357 aa20.89■□□□□ 0.93
HDAC4-209ENST00000487617 SLC20A2Q08357 652 aa20.89■□□□□ 0.93
HDAC4-209ENST00000487617 TEAD4Q15561 434 aa20.89■□□□□ 0.93
HDAC4-209ENST00000487617 N4BP2L1Q5TBK1 243 aaPredicted RBP20.89■□□□□ 0.93
HDAC4-209ENST00000487617 C22orf39Q6P5X5 142 aa20.89■□□□□ 0.93
HDAC4-209ENST00000487617 DEFB124Q8NES8 71 aa20.89■□□□□ 0.93
HDAC4-209ENST00000487617 OR2A12Q8NGT7 310 aa20.89■□□□□ 0.93
HDAC4-209ENST00000487617 CPLX3Q8WVH0 158 aa20.89■□□□□ 0.93
HDAC4-209ENST00000487617 TNKS2Q9H2K2 1166 aa20.89■□□□□ 0.93
HDAC4-209ENST00000487617 CNOT8Q9UFF9 292 aaKnown RBP20.89■□□□□ 0.93
HDAC4-209ENST00000487617 FZD10Q9ULW2 581 aa20.89■□□□□ 0.93
HDAC4-209ENST00000487617 PCDH15Q96QU1 1955 aa20.88■□□□□ 0.93
HDAC4-209ENST00000487617 A0A1B0GVT2 93 aa20.88■□□□□ 0.93
HDAC4-209ENST00000487617 GIPC1O14908 333 aa20.88■□□□□ 0.93
HDAC4-209ENST00000487617 EPHB2P29323 1055 aa20.88■□□□□ 0.93
HDAC4-209ENST00000487617 CHRNA3P32297 505 aa20.88■□□□□ 0.93
HDAC4-209ENST00000487617 RECQLP46063 649 aaPredicted RBP20.88■□□□□ 0.93
HDAC4-209ENST00000487617 SERPINH1P50454 418 aaKnown RBP20.88■□□□□ 0.93
HDAC4-209ENST00000487617 AIF1P55008 147 aa20.88■□□□□ 0.93
HDAC4-209ENST00000487617 ARF5P84085 180 aa20.88■□□□□ 0.93
HDAC4-209ENST00000487617 ZBED6P86452 979 aa20.88■□□□□ 0.93
HDAC4-209ENST00000487617 SEMA3BQ13214 749 aa20.88■□□□□ 0.93
HDAC4-209ENST00000487617 SYN2Q92777 582 aaPredicted RBP20.88■□□□□ 0.93
HDAC4-209ENST00000487617 ZNF653Q96CK0 615 aa20.88■□□□□ 0.93
HDAC4-209ENST00000487617 IQCDQ96DY2 449 aa20.88■□□□□ 0.93
HDAC4-209ENST00000487617 EPAS1Q99814 870 aa20.88■□□□□ 0.93
HDAC4-209ENST00000487617 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.88■□□□□ 0.93
HDAC4-209ENST00000487617 ACE2Q9BYF1 805 aaPredicted RBP20.88■□□□□ 0.93
HDAC4-209ENST00000487617 MAGEH1Q9H213 219 aa20.88■□□□□ 0.93
HDAC4-209ENST00000487617 SLC32A1Q9H598 525 aa20.88■□□□□ 0.93
HDAC4-209ENST00000487617 OSGEPQ9NPF4 335 aa20.88■□□□□ 0.93
HDAC4-209ENST00000487617 CAPN11Q9UMQ6 739 aa20.88■□□□□ 0.93
HDAC4-209ENST00000487617 BZW2Q9Y6E2 419 aaKnown RBP20.88■□□□□ 0.93
HDAC4-209ENST00000487617 NCOR2Q9Y618 2525 aa20.88■□□□□ 0.93
HDAC4-209ENST00000487617 CNOT1A5YKK6 2376 aaKnown RBP20.87■□□□□ 0.93
HDAC4-209ENST00000487617 TBC1D3DA0A087WVF3 549 aa20.87■□□□□ 0.93
HDAC4-209ENST00000487617 TBC1D3IA0A087WXS9 549 aa20.87■□□□□ 0.93
HDAC4-209ENST00000487617 TBC1D3EA0A087X179 549 aa20.87■□□□□ 0.93
HDAC4-209ENST00000487617 TBC1D3KA0A087X1G2 549 aa20.87■□□□□ 0.93
HDAC4-209ENST00000487617 A0A1W2PPC4 97 aa20.87■□□□□ 0.93
HDAC4-209ENST00000487617 TBC1D3FA6NER0 549 aaPredicted RBP20.87■□□□□ 0.93
HDAC4-209ENST00000487617 TBC1D3LB9A6J9 549 aa20.87■□□□□ 0.93
HDAC4-209ENST00000487617 SLC7A4O43246 635 aa20.87■□□□□ 0.93
HDAC4-209ENST00000487617 CREB3O43889 395 aa20.87■□□□□ 0.93
HDAC4-209ENST00000487617 RAMP2O60895 175 aa20.87■□□□□ 0.93
HDAC4-209ENST00000487617 CTSLP07711 333 aa20.87■□□□□ 0.93
HDAC4-209ENST00000487617 TBC1D3HP0C7X1 549 aa20.87■□□□□ 0.93
HDAC4-209ENST00000487617 CEACAM1P13688 526 aa20.87■□□□□ 0.93
HDAC4-209ENST00000487617 DNA2P51530 1060 aa20.87■□□□□ 0.93
HDAC4-209ENST00000487617 CCR5P51681 352 aa20.87■□□□□ 0.93
HDAC4-209ENST00000487617 BNC1Q01954 994 aa20.87■□□□□ 0.93
HDAC4-209ENST00000487617 CNTN1Q12860 1018 aa20.87■□□□□ 0.93
HDAC4-209ENST00000487617 HGSNATQ68CP4 663 aa20.87■□□□□ 0.93
HDAC4-209ENST00000487617 TBC1D3GQ6DHY5 549 aa20.87■□□□□ 0.93
HDAC4-209ENST00000487617 TBC1D3CQ6IPX1 549 aa20.87■□□□□ 0.93
HDAC4-209ENST00000487617 IL27RAQ6UWB1 636 aa20.87■□□□□ 0.93
HDAC4-209ENST00000487617 TBC1D3Q8IZP1 549 aaPredicted RBP20.87■□□□□ 0.93
HDAC4-209ENST00000487617 CHST14Q8NCH0 376 aa20.87■□□□□ 0.93
HDAC4-209ENST00000487617 ARHGEF2Q92974 986 aaKnown RBP20.87■□□□□ 0.93
HDAC4-209ENST00000487617 TRIM11Q96F44 468 aa20.87■□□□□ 0.93
HDAC4-209ENST00000487617 ORAI3Q9BRQ5 295 aa20.87■□□□□ 0.93
HDAC4-209ENST00000487617 CEP44Q9C0F1 390 aa20.87■□□□□ 0.93
HDAC4-209ENST00000487617 HPCAL4Q9UM19 191 aa20.87■□□□□ 0.93
HDAC4-209ENST00000487617 TMEM191CA6NGB0 347 aa20.86■□□□□ 0.93
HDAC4-209ENST00000487617 UPK3BL1B0FP48 263 aa20.86■□□□□ 0.93
HDAC4-209ENST00000487617 UPK3BL2E5RIL1 263 aa20.86■□□□□ 0.93
HDAC4-209ENST00000487617 KPNA3O00505 521 aaPredicted RBP20.86■□□□□ 0.93
HDAC4-209ENST00000487617 GJB3O75712 270 aa20.86■□□□□ 0.93
HDAC4-209ENST00000487617 CER1O95813 267 aa20.86■□□□□ 0.93
HDAC4-209ENST00000487617 PRNPP04156 253 aa20.86■□□□□ 0.93
HDAC4-209ENST00000487617 TPM3P06753 285 aa20.86■□□□□ 0.93
HDAC4-209ENST00000487617 MYBL1P10243 752 aa20.86■□□□□ 0.93
HDAC4-209ENST00000487617 GRIA4P48058 902 aa20.86■□□□□ 0.93
HDAC4-209ENST00000487617 POLD3Q15054 466 aaPredicted RBP20.86■□□□□ 0.93
HDAC4-209ENST00000487617 LAYNQ6UX15 382 aa20.86■□□□□ 0.93
HDAC4-209ENST00000487617 ADAT2Q7Z6V5 191 aaKnown RBP20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms