RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 GDAP2Q9NXN4 497 aa12□□□□□ -0.49
TRA2B-214ENST00000487615 VPS28Q9UK41 221 aa12□□□□□ -0.49
TRA2B-214ENST00000487615 FARP1Q9Y4F1 1045 aaPredicted RBP12□□□□□ -0.49
TRA2B-214ENST00000487615 ASGR1P07306 291 aa12□□□□□ -0.49
TRA2B-214ENST00000487615 KCNE1P15382 129 aa12□□□□□ -0.49
TRA2B-214ENST00000487615 CD86P42081 329 aa12□□□□□ -0.49
TRA2B-214ENST00000487615 GPX6P59796 221 aa12□□□□□ -0.49
TRA2B-214ENST00000487615 GAD2Q05329 585 aa12□□□□□ -0.49
TRA2B-214ENST00000487615 CCL14Q16627 93 aa12□□□□□ -0.49
TRA2B-214ENST00000487615 INSCQ1MX18 579 aa12□□□□□ -0.49
TRA2B-214ENST00000487615 TRMT10BQ6PF06 316 aaKnown RBP12□□□□□ -0.49
TRA2B-214ENST00000487615 CLEC20AQ6ZU45 233 aa12□□□□□ -0.49
TRA2B-214ENST00000487615 CEP70Q8NHQ1 597 aa12□□□□□ -0.49
TRA2B-214ENST00000487615 HAUS8Q9BT25 410 aa12□□□□□ -0.49
TRA2B-214ENST00000487615 MRPL46Q9H2W6 279 aaKnown RBP12□□□□□ -0.49
TRA2B-214ENST00000487615 PCDHB8Q9UN66 801 aa12□□□□□ -0.49
TRA2B-214ENST00000487615 RPL26L1Q9UNX3 145 aaKnown RBP12□□□□□ -0.49
TRA2B-214ENST00000487615 DNAJC25-GNG10A0A024R161 153 aa12□□□□□ -0.49
TRA2B-214ENST00000487615 PROCP04070 461 aa12□□□□□ -0.49
TRA2B-214ENST00000487615 CKMP06732 381 aa12□□□□□ -0.49
TRA2B-214ENST00000487615 HOXB8P17481 243 aaPredicted RBP12□□□□□ -0.49
TRA2B-214ENST00000487615 EEF1B2P24534 225 aaKnown RBP12□□□□□ -0.49
TRA2B-214ENST00000487615 IVDP26440 423 aa12□□□□□ -0.49
TRA2B-214ENST00000487615 TUFMP49411 452 aaKnown RBP12□□□□□ -0.49
TRA2B-214ENST00000487615 RIPK1Q13546 671 aa12□□□□□ -0.49
TRA2B-214ENST00000487615 ITGA7Q13683 1181 aa12□□□□□ -0.49
TRA2B-214ENST00000487615 KCNJ11Q14654 390 aa12□□□□□ -0.49
TRA2B-214ENST00000487615 PREPLQ4J6C6 727 aaPredicted RBP12□□□□□ -0.49
TRA2B-214ENST00000487615 MSS51Q4VC12 460 aa12□□□□□ -0.49
TRA2B-214ENST00000487615 SDHAF4Q5VUM1 108 aa12□□□□□ -0.49
TRA2B-214ENST00000487615 CXorf38Q8TB03 319 aa12□□□□□ -0.49
TRA2B-214ENST00000487615 DCUN1D1Q96GG9 259 aa12□□□□□ -0.49
TRA2B-214ENST00000487615 C7orf26Q96N11 449 aa12□□□□□ -0.49
TRA2B-214ENST00000487615 FTHL17Q9BXU8 183 aa12□□□□□ -0.49
TRA2B-214ENST00000487615 GLOD4Q9HC38 313 aa12□□□□□ -0.49
TRA2B-214ENST00000487615 CYTH4Q9UIA0 394 aa12□□□□□ -0.49
TRA2B-214ENST00000487615 CRLS1Q9UJA2 301 aa12□□□□□ -0.49
TRA2B-214ENST00000487615 KAT6AQ92794 2004 aa11.99□□□□□ -0.49
TRA2B-214ENST00000487615 ZNF831Q5JPB2 1677 aa11.99□□□□□ -0.49
TRA2B-214ENST00000487615 A0A087X1B8 175 aa11.99□□□□□ -0.49
TRA2B-214ENST00000487615 SYCE1LA8MT33 242 aa11.99□□□□□ -0.49
TRA2B-214ENST00000487615 UBDO15205 165 aa11.99□□□□□ -0.49
TRA2B-214ENST00000487615 ENTPD5O75356 428 aa11.99□□□□□ -0.49
TRA2B-214ENST00000487615 SERPINA6P08185 405 aa11.99□□□□□ -0.49
TRA2B-214ENST00000487615 HIST1H2AGP0C0S8 130 aaPredicted RBP11.99□□□□□ -0.49
TRA2B-214ENST00000487615 HIST1H2ADP20671 130 aa11.99□□□□□ -0.49
TRA2B-214ENST00000487615 KCNK10P57789 538 aa11.99□□□□□ -0.49
TRA2B-214ENST00000487615 RHOAP61586 193 aa11.99□□□□□ -0.49
TRA2B-214ENST00000487615 DDR2Q16832 855 aa11.99□□□□□ -0.49
TRA2B-214ENST00000487615 C6orf10Q5SRN2 563 aa11.99□□□□□ -0.49
TRA2B-214ENST00000487615 SLC9A4Q6AI14 798 aa11.99□□□□□ -0.49
TRA2B-214ENST00000487615 ALYREFQ86V81 257 aaKnown RBP11.99□□□□□ -0.49
TRA2B-214ENST00000487615 SLC41A1Q8IVJ1 513 aa11.99□□□□□ -0.49
TRA2B-214ENST00000487615 C10orf107Q8IVU9 208 aa11.99□□□□□ -0.49
TRA2B-214ENST00000487615 CARNMT1Q8N4J0 409 aa11.99□□□□□ -0.49
TRA2B-214ENST00000487615 ZNF333Q96JL9 665 aa11.99□□□□□ -0.49
TRA2B-214ENST00000487615 HIST1H2AHQ96KK5 128 aa11.99□□□□□ -0.49
TRA2B-214ENST00000487615 HIST1H2AJQ99878 128 aa11.99□□□□□ -0.49
TRA2B-214ENST00000487615 H2AFJQ9BTM1 129 aa11.99□□□□□ -0.49
TRA2B-214ENST00000487615 GBA3Q9H227 469 aa11.99□□□□□ -0.49
TRA2B-214ENST00000487615 IL1RL2Q9HB29 575 aa11.99□□□□□ -0.49
TRA2B-214ENST00000487615 EIF2B3Q9NR50 452 aaKnown RBP11.99□□□□□ -0.49
TRA2B-214ENST00000487615 MPP6Q9NZW5 540 aa11.99□□□□□ -0.49
TRA2B-214ENST00000487615 SEPT3Q9UH03 358 aa11.99□□□□□ -0.49
TRA2B-214ENST00000487615 FBXO5Q9UKT4 447 aa11.99□□□□□ -0.49
TRA2B-214ENST00000487615 SF3B1O75533 1304 aaKnown RBP eCLIP11.99□□□□□ -0.495e-6■■■■■ 39
TRA2B-214ENST00000487615 MSI1O43347 362 aaKnown RBP11.99□□□□□ -0.49
TRA2B-214ENST00000487615 AKAP10O43572 662 aa11.99□□□□□ -0.49
TRA2B-214ENST00000487615 URODP06132 367 aa11.99□□□□□ -0.49
TRA2B-214ENST00000487615 C2P06681 752 aa11.99□□□□□ -0.49
TRA2B-214ENST00000487615 PLK1P53350 603 aa11.99□□□□□ -0.49
TRA2B-214ENST00000487615 SP3Q02447 781 aa11.99□□□□□ -0.49
TRA2B-214ENST00000487615 PTK2BQ14289 1009 aa11.99□□□□□ -0.49
TRA2B-214ENST00000487615 MRPS31Q92665 395 aaKnown RBP11.99□□□□□ -0.49
TRA2B-214ENST00000487615 RHOJQ9H4E5 214 aa11.99□□□□□ -0.49
TRA2B-214ENST00000487615 LYPLA1O75608 230 aaPredicted RBP11.99□□□□□ -0.49
TRA2B-214ENST00000487615 TFE3P19532 575 aaPredicted RBP11.99□□□□□ -0.49
TRA2B-214ENST00000487615 ATP5C1P36542 298 aaKnown RBP11.99□□□□□ -0.49
TRA2B-214ENST00000487615 SLC5A3P53794 718 aa11.99□□□□□ -0.49
TRA2B-214ENST00000487615 SYPL2Q5VXT5 272 aa11.99□□□□□ -0.49
TRA2B-214ENST00000487615 OLFML2BQ68BL8 750 aa11.99□□□□□ -0.49
TRA2B-214ENST00000487615 TAC4Q86UU9 113 aa11.99□□□□□ -0.49
TRA2B-214ENST00000487615 FAM228AQ86W67 206 aa11.99□□□□□ -0.49
TRA2B-214ENST00000487615 DCAKDQ8WVC6 231 aa11.99□□□□□ -0.49
TRA2B-214ENST00000487615 EMID1Q96A84 441 aaPredicted RBP11.99□□□□□ -0.49
TRA2B-214ENST00000487615 ZMAT2Q96NC0 199 aaKnown RBP11.99□□□□□ -0.49
TRA2B-214ENST00000487615 NMUR2Q9GZQ4 415 aa11.99□□□□□ -0.49
TRA2B-214ENST00000487615 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.99□□□□□ -0.494e-11■□□□□ 8.6
TRA2B-214ENST00000487615 IL1RAPL1Q9NZN1 696 aa11.99□□□□□ -0.49
TRA2B-214ENST00000487615 UBA2Q9UBT2 640 aaPredicted RBP11.99□□□□□ -0.49
TRA2B-214ENST00000487615 FBXW11Q9UKB1 542 aa11.99□□□□□ -0.49
TRA2B-214ENST00000487615 ENDOD1O94919 500 aa11.98□□□□□ -0.49
TRA2B-214ENST00000487615 MT-CO1P00395 513 aa11.98□□□□□ -0.49
TRA2B-214ENST00000487615 EDN1P05305 212 aa11.98□□□□□ -0.49
TRA2B-214ENST00000487615 UBTFL6P0CB48 400 aaPredicted RBP11.98□□□□□ -0.49
TRA2B-214ENST00000487615 CSH1P0DML2 217 aa11.98□□□□□ -0.49
TRA2B-214ENST00000487615 CSH2P0DML3 217 aa11.98□□□□□ -0.49
TRA2B-214ENST00000487615 PTPN3P26045 913 aa11.98□□□□□ -0.49
TRA2B-214ENST00000487615 AKT1P31749 480 aa11.98□□□□□ -0.49
TRA2B-214ENST00000487615 ATN1P54259 1190 aaPredicted RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms