RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 LZTR1Q8N653 840 aa26.59■■□□□ 1.85
HLA-C-208ENST00000487245 ABCC13Q9NSE7 274 aa26.59■■□□□ 1.85
HLA-C-208ENST00000487245 CDY1Q9Y6F8 540 aa26.59■■□□□ 1.85
HLA-C-208ENST00000487245 TIMM44O43615 452 aa26.58■■□□□ 1.85
HLA-C-208ENST00000487245 CCNCP24863 283 aa26.58■■□□□ 1.85
HLA-C-208ENST00000487245 HADHAP40939 763 aa26.58■■□□□ 1.85
HLA-C-208ENST00000487245 COPAP53621 1224 aa26.58■■□□□ 1.85
HLA-C-208ENST00000487245 EIF4EBP2Q13542 120 aaPredicted RBP26.58■■□□□ 1.85
HLA-C-208ENST00000487245 ZNF184Q99676 751 aaPredicted RBP26.58■■□□□ 1.85
HLA-C-208ENST00000487245 ADAM2Q99965 735 aa26.58■■□□□ 1.85
HLA-C-208ENST00000487245 TMLHEQ9NVH6 421 aa26.58■■□□□ 1.85
HLA-C-208ENST00000487245 SNX10Q9Y5X0 201 aa26.58■■□□□ 1.85
HLA-C-208ENST00000487245 SQORQ9Y6N5 450 aa26.58■■□□□ 1.85
HLA-C-208ENST00000487245 FNDC1Q4ZHG4 1894 aaPredicted RBP26.58■■□□□ 1.85
HLA-C-208ENST00000487245 ASGR1P07306 291 aa26.57■■□□□ 1.84
HLA-C-208ENST00000487245 LINGO3P0C6S8 592 aa26.57■■□□□ 1.84
HLA-C-208ENST00000487245 LPIN1Q14693 890 aa26.57■■□□□ 1.84
HLA-C-208ENST00000487245 FAM26DQ5JW98 314 aa26.57■■□□□ 1.84
HLA-C-208ENST00000487245 C1orf146Q5VVC0 180 aa26.57■■□□□ 1.84
HLA-C-208ENST00000487245 DPF3Q92784 378 aa26.57■■□□□ 1.84
HLA-C-208ENST00000487245 CLPTM1LQ96KA5 538 aa26.57■■□□□ 1.84
HLA-C-208ENST00000487245 PPP1R2P1Q96PQ5 205 aa26.57■■□□□ 1.84
HLA-C-208ENST00000487245 NSMCE4AQ9NXX6 385 aa26.57■■□□□ 1.84
HLA-C-208ENST00000487245 MID2Q9UJV3 735 aa26.57■■□□□ 1.84
HLA-C-208ENST00000487245 INPPL1O15357 1258 aa26.57■■□□□ 1.84
HLA-C-208ENST00000487245 FGF10O15520 208 aaPredicted RBP26.57■■□□□ 1.84
HLA-C-208ENST00000487245 JCHAINP01591 159 aa26.57■■□□□ 1.84
HLA-C-208ENST00000487245 SRGAP2BP0DMP2 458 aa26.57■■□□□ 1.84
HLA-C-208ENST00000487245 CSRP3P50461 194 aa26.57■■□□□ 1.84
HLA-C-208ENST00000487245 CDH17Q12864 832 aa26.57■■□□□ 1.84
HLA-C-208ENST00000487245 ITGA9Q13797 1035 aa26.57■■□□□ 1.84
HLA-C-208ENST00000487245 PDPK2PQ6A1A2 396 aa26.57■■□□□ 1.84
HLA-C-208ENST00000487245 FSTL4Q6MZW2 842 aa26.57■■□□□ 1.84
HLA-C-208ENST00000487245 PGM2L1Q6PCE3 622 aa26.57■■□□□ 1.84
HLA-C-208ENST00000487245 SREK1Q8WXA9 508 aaKnown RBP26.57■■□□□ 1.84
HLA-C-208ENST00000487245 CMTM5Q96DZ9 223 aa26.57■■□□□ 1.84
HLA-C-208ENST00000487245 AAR2Q9Y312 384 aaKnown RBP26.57■■□□□ 1.84
HLA-C-208ENST00000487245 TDRD15B5MCY1 1934 aaKnown RBP26.56■■□□□ 1.84
HLA-C-208ENST00000487245 G3V2L1 256 aa26.56■■□□□ 1.84
HLA-C-208ENST00000487245 IRAK2O43187 625 aa26.56■■□□□ 1.84
HLA-C-208ENST00000487245 CA12O43570 354 aa26.56■■□□□ 1.84
HLA-C-208ENST00000487245 CACNG3O60359 315 aa26.56■■□□□ 1.84
HLA-C-208ENST00000487245 USP12O75317 370 aa26.56■■□□□ 1.84
HLA-C-208ENST00000487245 PDHA1P08559 390 aa26.56■■□□□ 1.84
HLA-C-208ENST00000487245 KCNA10Q16322 511 aa26.56■■□□□ 1.84
HLA-C-208ENST00000487245 GSTA3Q16772 222 aa26.56■■□□□ 1.84
HLA-C-208ENST00000487245 METTL21CQ5VZV1 264 aa26.56■■□□□ 1.84
HLA-C-208ENST00000487245 BTBD8Q5XKL5 378 aa26.56■■□□□ 1.84
HLA-C-208ENST00000487245 CMC1Q7Z7K0 106 aa26.56■■□□□ 1.84
HLA-C-208ENST00000487245 LRRTM3Q86VH5 581 aa26.56■■□□□ 1.84
HLA-C-208ENST00000487245 SPATA2LQ8IUW3 424 aaPredicted RBP26.56■■□□□ 1.84
HLA-C-208ENST00000487245 KLHDC9Q8NEP7 349 aa26.56■■□□□ 1.84
HLA-C-208ENST00000487245 OR10T2Q8NGX3 314 aa26.56■■□□□ 1.84
HLA-C-208ENST00000487245 STON2Q8WXE9 905 aa26.56■■□□□ 1.84
HLA-C-208ENST00000487245 CDH19Q9H159 772 aa26.56■■□□□ 1.84
HLA-C-208ENST00000487245 CATSPERBQ9H7T0 1116 aa26.56■■□□□ 1.84
HLA-C-208ENST00000487245 PCDHB8Q9UN66 801 aa26.56■■□□□ 1.84
HLA-C-208ENST00000487245 DPPA5A6NC42 116 aa26.55■■□□□ 1.84
HLA-C-208ENST00000487245 APOA4P06727 396 aa26.55■■□□□ 1.84
HLA-C-208ENST00000487245 HOXC13P31276 330 aa26.55■■□□□ 1.84
HLA-C-208ENST00000487245 PAN2Q504Q3 1202 aaKnown RBP26.55■■□□□ 1.84
HLA-C-208ENST00000487245 EPGNQ6UW88 154 aa26.55■■□□□ 1.84
HLA-C-208ENST00000487245 LCA5Q86VQ0 697 aa26.55■■□□□ 1.84
HLA-C-208ENST00000487245 PLD6Q8N2A8 252 aaKnown RBP26.55■■□□□ 1.84
HLA-C-208ENST00000487245 ZSCAN18Q8TBC5 510 aaPredicted RBP26.55■■□□□ 1.84
HLA-C-208ENST00000487245 RDH11Q8TC12 318 aa26.55■■□□□ 1.84
HLA-C-208ENST00000487245 ACTRT2Q8TDY3 377 aa26.55■■□□□ 1.84
HLA-C-208ENST00000487245 VCXQ9H320 206 aa26.55■■□□□ 1.84
HLA-C-208ENST00000487245 IL1RAPL1Q9NZN1 696 aa26.55■■□□□ 1.84
HLA-C-208ENST00000487245 INPP5FQ9Y2H2 1132 aa26.55■■□□□ 1.84
HLA-C-208ENST00000487245 A0A096LPK6 155 aa26.55■■□□□ 1.84
HLA-C-208ENST00000487245 NUMBP49757 651 aa26.55■■□□□ 1.84
HLA-C-208ENST00000487245 FSCBQ5H9T9 825 aa26.55■■□□□ 1.84
HLA-C-208ENST00000487245 RWDD4Q6NW29 188 aaKnown RBP26.55■■□□□ 1.84
HLA-C-208ENST00000487245 URGCPQ8TCY9 931 aa26.55■■□□□ 1.84
HLA-C-208ENST00000487245 ZNF358Q9NW07 568 aa26.55■■□□□ 1.84
HLA-C-208ENST00000487245 NDE1Q9NXR1 346 aa26.55■■□□□ 1.84
HLA-C-208ENST00000487245 GABRQQ9UN88 632 aa26.55■■□□□ 1.84
HLA-C-208ENST00000487245 ANKRD6Q9Y2G4 727 aa26.55■■□□□ 1.84
HLA-C-208ENST00000487245 DNAJB1P25685 340 aa26.54■■□□□ 1.84
HLA-C-208ENST00000487245 CST5P28325 142 aaPredicted RBP26.54■■□□□ 1.84
HLA-C-208ENST00000487245 CCR1P32246 355 aa26.54■■□□□ 1.84
HLA-C-208ENST00000487245 HK2P52789 917 aa26.54■■□□□ 1.84
HLA-C-208ENST00000487245 PRKAA2P54646 552 aa26.54■■□□□ 1.84
HLA-C-208ENST00000487245 OLIG2Q13516 323 aa26.54■■□□□ 1.84
HLA-C-208ENST00000487245 CERCAMQ5T4B2 595 aa26.54■■□□□ 1.84
HLA-C-208ENST00000487245 KBTBD2Q8IY47 623 aa26.54■■□□□ 1.84
HLA-C-208ENST00000487245 SMOC2Q9H3U7 446 aa26.54■■□□□ 1.84
HLA-C-208ENST00000487245 MEI4A8MW99 385 aa26.53■■□□□ 1.84
HLA-C-208ENST00000487245 FLT3LGP49771 235 aa26.53■■□□□ 1.84
HLA-C-208ENST00000487245 MPP3Q13368 585 aa26.53■■□□□ 1.84
HLA-C-208ENST00000487245 PPP2R5DQ14738 602 aa26.53■■□□□ 1.84
HLA-C-208ENST00000487245 TMEM154Q6P9G4 183 aa26.53■■□□□ 1.84
HLA-C-208ENST00000487245 ZNF598Q86UK7 904 aaKnown RBP26.53■■□□□ 1.84
HLA-C-208ENST00000487245 KCNMB4Q86W47 210 aa26.53■■□□□ 1.84
HLA-C-208ENST00000487245 PCSK9Q8NBP7 692 aaKnown RBP26.53■■□□□ 1.84
HLA-C-208ENST00000487245 JADE3Q92613 823 aa26.53■■□□□ 1.84
HLA-C-208ENST00000487245 CELF6Q96J87 481 aaKnown RBP26.53■■□□□ 1.84
HLA-C-208ENST00000487245 NR1H4Q96RI1 486 aaPredicted RBP26.53■■□□□ 1.84
HLA-C-208ENST00000487245 TMEM209Q96SK2 561 aa26.53■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms