RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 C1orf74Q96LT6 269 aa7.35□□□□□ -1.23
UBE4B-209ENST00000487244 HAPLN3Q96S86 360 aa7.35□□□□□ -1.23
UBE4B-209ENST00000487244 PEBP4Q96S96 227 aa7.35□□□□□ -1.23
UBE4B-209ENST00000487244 FEM1AQ9BSK4 669 aa7.35□□□□□ -1.23
UBE4B-209ENST00000487244 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.35□□□□□ -1.23
UBE4B-209ENST00000487244 NUP58Q9BVL2 599 aa7.35□□□□□ -1.23
UBE4B-209ENST00000487244 FSCN3Q9NQT6 498 aa7.35□□□□□ -1.23
UBE4B-209ENST00000487244 TMEM74BQ9NUR3 256 aa7.35□□□□□ -1.23
UBE4B-209ENST00000487244 NDFIP2Q9NV92 336 aa7.35□□□□□ -1.23
UBE4B-209ENST00000487244 GPATCH2LQ9NWQ4 482 aa7.35□□□□□ -1.23
UBE4B-209ENST00000487244 ARHGAP20Q9P2F6 1191 aa7.35□□□□□ -1.23
UBE4B-209ENST00000487244 MYO1AQ9UBC5 1043 aa7.35□□□□□ -1.23
UBE4B-209ENST00000487244 OR12D3Q9UGF7 316 aa7.35□□□□□ -1.23
UBE4B-209ENST00000487244 SERGEFQ9UGK8 458 aa7.35□□□□□ -1.23
UBE4B-209ENST00000487244 ADAMTS1Q9UHI8 967 aa7.35□□□□□ -1.23
UBE4B-209ENST00000487244 VPS51Q9UID3 782 aa7.35□□□□□ -1.23
UBE4B-209ENST00000487244 VPS28Q9UK41 221 aa7.35□□□□□ -1.23
UBE4B-209ENST00000487244 DOLKQ9UPQ8 538 aa7.35□□□□□ -1.23
UBE4B-209ENST00000487244 TBC1D30Q9Y2I9 924 aa7.35□□□□□ -1.23
UBE4B-209ENST00000487244 LUC7L2Q9Y383 392 aaKnown RBP7.35□□□□□ -1.23
UBE4B-209ENST00000487244 PAXBP1Q9Y5B6 917 aa7.35□□□□□ -1.23
UBE4B-209ENST00000487244 ACTL7AQ9Y615 435 aa7.35□□□□□ -1.23
UBE4B-209ENST00000487244 NCOR2Q9Y618 2525 aa7.35□□□□□ -1.23
UBE4B-209ENST00000487244 SHROOM3Q8TF72 1996 aa7.34□□□□□ -1.23
UBE4B-209ENST00000487244 TMEM191CA6NGB0 347 aa7.34□□□□□ -1.23
UBE4B-209ENST00000487244 K7ERQ8 282 aa7.34□□□□□ -1.23
UBE4B-209ENST00000487244 MEN1O00255 615 aa7.34□□□□□ -1.23
UBE4B-209ENST00000487244 RTN2O75298 545 aa7.34□□□□□ -1.23
UBE4B-209ENST00000487244 RHOBTB1O94844 696 aa7.34□□□□□ -1.23
UBE4B-209ENST00000487244 LRIG2O94898 1065 aa7.34□□□□□ -1.23
UBE4B-209ENST00000487244 MOCS3O95396 460 aa7.34□□□□□ -1.23
UBE4B-209ENST00000487244 MT-CO1P00395 513 aa7.34□□□□□ -1.23
UBE4B-209ENST00000487244 IGLV3-19P01714 112 aa7.34□□□□□ -1.23
UBE4B-209ENST00000487244 SERPING1P05155 500 aa7.34□□□□□ -1.23
UBE4B-209ENST00000487244 RHOCP08134 193 aa7.34□□□□□ -1.23
UBE4B-209ENST00000487244 SRPRAP08240 638 aaKnown RBP7.34□□□□□ -1.23
UBE4B-209ENST00000487244 GZMAP12544 262 aa7.34□□□□□ -1.23
UBE4B-209ENST00000487244 TCF4P15884 667 aa7.34□□□□□ -1.23
UBE4B-209ENST00000487244 ITPKAP23677 461 aa7.34□□□□□ -1.23
UBE4B-209ENST00000487244 PSMA2P25787 234 aa7.34□□□□□ -1.23
UBE4B-209ENST00000487244 OR1E1P30953 314 aa7.34□□□□□ -1.23
UBE4B-209ENST00000487244 ACVRL1P37023 503 aa7.34□□□□□ -1.23
UBE4B-209ENST00000487244 EIF4A3P38919 411 aaKnown RBP7.34□□□□□ -1.23
UBE4B-209ENST00000487244 RPS14P62263 151 aaKnown RBP7.34□□□□□ -1.23
UBE4B-209ENST00000487244 SCAPQ12770 1279 aa7.34□□□□□ -1.23
UBE4B-209ENST00000487244 MTA1Q13330 715 aa7.34□□□□□ -1.23
UBE4B-209ENST00000487244 SLC12A1Q13621 1099 aa7.34□□□□□ -1.23
UBE4B-209ENST00000487244 CSRP2Q16527 193 aa7.34□□□□□ -1.23
UBE4B-209ENST00000487244 CA9Q16790 459 aa7.34□□□□□ -1.23
UBE4B-209ENST00000487244 SPECC1LQ69YQ0 1117 aa7.34□□□□□ -1.23
UBE4B-209ENST00000487244 RWDD4Q6NW29 188 aaKnown RBP7.34□□□□□ -1.23
UBE4B-209ENST00000487244 SCYL2Q6P3W7 929 aa7.34□□□□□ -1.23
UBE4B-209ENST00000487244 DCUN1D2Q6PH85 259 aa7.34□□□□□ -1.23
UBE4B-209ENST00000487244 LRRC31Q6UY01 552 aa7.34□□□□□ -1.23
UBE4B-209ENST00000487244 CYP4V2Q6ZWL3 525 aaPredicted RBP7.34□□□□□ -1.23
UBE4B-209ENST00000487244 LPCAT2Q7L5N7 544 aa7.34□□□□□ -1.23
UBE4B-209ENST00000487244 NLRP14Q86W24 1093 aa7.34□□□□□ -1.23
UBE4B-209ENST00000487244 GAS2L3Q86XJ1 694 aa7.34□□□□□ -1.23
UBE4B-209ENST00000487244 VSTM4Q8IW00 320 aa7.34□□□□□ -1.23
UBE4B-209ENST00000487244 STK40Q8N2I9 435 aa7.34□□□□□ -1.23
UBE4B-209ENST00000487244 FRS2Q8WU20 508 aa7.34□□□□□ -1.23
UBE4B-209ENST00000487244 PIGKQ92643 395 aa7.34□□□□□ -1.23
UBE4B-209ENST00000487244 PRCCQ92733 491 aaPredicted RBP7.34□□□□□ -1.23
UBE4B-209ENST00000487244 SYN2Q92777 582 aaPredicted RBP7.34□□□□□ -1.23
UBE4B-209ENST00000487244 PTPRN2Q92932 1015 aa7.34□□□□□ -1.23
UBE4B-209ENST00000487244 ARHGEF26Q96DR7 871 aa7.34□□□□□ -1.23
UBE4B-209ENST00000487244 TOE1Q96GM8 510 aaKnown RBP7.34□□□□□ -1.23
UBE4B-209ENST00000487244 LOXL4Q96JB6 756 aa7.34□□□□□ -1.23
UBE4B-209ENST00000487244 VCPIP1Q96JH7 1222 aa7.34□□□□□ -1.23
UBE4B-209ENST00000487244 HSPA12BQ96MM6 686 aa7.34□□□□□ -1.23
UBE4B-209ENST00000487244 CNPY3Q9BT09 278 aa7.34□□□□□ -1.23
UBE4B-209ENST00000487244 ZYG11BQ9C0D3 744 aa7.34□□□□□ -1.23
UBE4B-209ENST00000487244 THAP2Q9H0W7 228 aa7.34□□□□□ -1.23
UBE4B-209ENST00000487244 MUC3BQ9H195 1237 aa7.34□□□□□ -1.23
UBE4B-209ENST00000487244 RBSNQ9H1K0 784 aa7.34□□□□□ -1.23
UBE4B-209ENST00000487244 ISCUQ9H1K1 167 aa7.34□□□□□ -1.23
UBE4B-209ENST00000487244 RSPH9Q9H1X1 276 aaPredicted RBP7.34□□□□□ -1.23
UBE4B-209ENST00000487244 ITM2CQ9NQX7 267 aa7.34□□□□□ -1.23
UBE4B-209ENST00000487244 PARVAQ9NVD7 372 aa7.34□□□□□ -1.23
UBE4B-209ENST00000487244 CNOT8Q9UFF9 292 aaKnown RBP7.34□□□□□ -1.23
UBE4B-209ENST00000487244 FZD10Q9ULW2 581 aa7.34□□□□□ -1.23
UBE4B-209ENST00000487244 NENFQ9UMX5 172 aa7.34□□□□□ -1.23
UBE4B-209ENST00000487244 SLCO1B1Q9Y6L6 691 aa7.34□□□□□ -1.23
UBE4B-209ENST00000487244 ANKRD36A6QL64 1941 aa7.33□□□□□ -1.24
UBE4B-209ENST00000487244 EDDM13A0A1B0GTR0 161 aa7.33□□□□□ -1.24
UBE4B-209ENST00000487244 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.33□□□□□ -1.24
UBE4B-209ENST00000487244 LNP1A1A4G5 178 aa7.33□□□□□ -1.24
UBE4B-209ENST00000487244 ANKRD62A6NC57 917 aa7.33□□□□□ -1.24
UBE4B-209ENST00000487244 RNF103O00237 685 aa7.33□□□□□ -1.24
UBE4B-209ENST00000487244 CBX4O00257 560 aa7.33□□□□□ -1.24
UBE4B-209ENST00000487244 PLK4O00444 970 aa7.33□□□□□ -1.24
UBE4B-209ENST00000487244 MID1O15344 667 aa7.33□□□□□ -1.24
UBE4B-209ENST00000487244 CBFA2T2O43439 604 aa7.33□□□□□ -1.24
UBE4B-209ENST00000487244 SMAD6O43541 496 aaKnown RBP7.33□□□□□ -1.24
UBE4B-209ENST00000487244 LRP3O75074 770 aa7.33□□□□□ -1.24
UBE4B-209ENST00000487244 MFAP3LO75121 409 aa7.33□□□□□ -1.24
UBE4B-209ENST00000487244 ZNF217O75362 1048 aa7.33□□□□□ -1.24
UBE4B-209ENST00000487244 ZMPSTE24O75844 475 aa7.33□□□□□ -1.24
UBE4B-209ENST00000487244 ZNF806P0C7X5 589 aa7.33□□□□□ -1.24
UBE4B-209ENST00000487244 MAOBP27338 520 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms