RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 NEBLO76041 1014 aa20.73■□□□□ 0.91
HPS3-206ENST00000486530 TGDSO95455 350 aa20.73■□□□□ 0.91
HPS3-206ENST00000486530 TBX18O95935 607 aa20.73■□□□□ 0.91
HPS3-206ENST00000486530 HLA-DQB2P05538 268 aa20.73■□□□□ 0.91
HPS3-206ENST00000486530 ZDHHC11BP0C7U3 371 aa20.73■□□□□ 0.91
HPS3-206ENST00000486530 PDE1BQ01064 536 aa20.73■□□□□ 0.91
HPS3-206ENST00000486530 DUSP4Q13115 394 aa20.73■□□□□ 0.91
HPS3-206ENST00000486530 DBN1Q16643 649 aa20.73■□□□□ 0.91
HPS3-206ENST00000486530 TAS1R1Q7RTX1 841 aa20.73■□□□□ 0.91
HPS3-206ENST00000486530 MIB1Q86YT6 1006 aa20.73■□□□□ 0.91
HPS3-206ENST00000486530 CCDC117Q8IWD4 279 aaPredicted RBP20.73■□□□□ 0.91
HPS3-206ENST00000486530 SPATA22Q8NHS9 363 aa20.73■□□□□ 0.91
HPS3-206ENST00000486530 MFSD3Q96ES6 412 aa20.73■□□□□ 0.91
HPS3-206ENST00000486530 CEP295NLQ96MC4 621 aa20.73■□□□□ 0.91
HPS3-206ENST00000486530 RBBP8Q99708 897 aa20.73■□□□□ 0.91
HPS3-206ENST00000486530 KIFC1Q9BW19 673 aa20.73■□□□□ 0.91
HPS3-206ENST00000486530 TRIM55Q9BYV6 548 aa20.73■□□□□ 0.91
HPS3-206ENST00000486530 NOL6Q9H6R4 1146 aaKnown RBP20.73■□□□□ 0.91
HPS3-206ENST00000486530 NPHS2Q9NP85 383 aa20.73■□□□□ 0.91
HPS3-206ENST00000486530 CDY1Q9Y6F8 540 aa20.73■□□□□ 0.91
HPS3-206ENST00000486530 MYLKQ15746 1914 aa20.72■□□□□ 0.91
HPS3-206ENST00000486530 BIRC5O15392 142 aa20.72■□□□□ 0.91
HPS3-206ENST00000486530 SPRP35270 261 aaPredicted RBP20.72■□□□□ 0.91
HPS3-206ENST00000486530 KPNA1P52294 538 aaPredicted RBP20.72■□□□□ 0.91
HPS3-206ENST00000486530 ATG16L1Q676U5 607 aa20.72■□□□□ 0.91
HPS3-206ENST00000486530 PRSS55Q6UWB4 352 aaPredicted RBP20.72■□□□□ 0.91
HPS3-206ENST00000486530 ANKLE1Q8NAG6 615 aa20.72■□□□□ 0.91
HPS3-206ENST00000486530 SIRPGQ9P1W8 387 aa20.72■□□□□ 0.91
HPS3-206ENST00000486530 SLC12A8A0AV02 714 aa20.71■□□□□ 0.91
HPS3-206ENST00000486530 SLC38A8A6NNN8 435 aa20.71■□□□□ 0.91
HPS3-206ENST00000486530 C2CD2LO14523 706 aa20.71■□□□□ 0.91
HPS3-206ENST00000486530 MT-CYBP00156 380 aaPredicted RBP20.71■□□□□ 0.91
HPS3-206ENST00000486530 TPH1P17752 444 aa20.71■□□□□ 0.91
HPS3-206ENST00000486530 IKBKEQ14164 716 aa20.71■□□□□ 0.91
HPS3-206ENST00000486530 LRRC26Q2I0M4 334 aa20.71■□□□□ 0.91
HPS3-206ENST00000486530 TEDDM1Q5T9Z0 273 aa20.71■□□□□ 0.91
HPS3-206ENST00000486530 SLC8B1Q6J4K2 584 aa20.71■□□□□ 0.91
HPS3-206ENST00000486530 CNKSR3Q6P9H4 555 aa20.71■□□□□ 0.91
HPS3-206ENST00000486530 KCNMB4Q86W47 210 aa20.71■□□□□ 0.91
HPS3-206ENST00000486530 FBXO22Q8NEZ5 403 aa20.71■□□□□ 0.91
HPS3-206ENST00000486530 IPMKQ8NFU5 416 aa20.71■□□□□ 0.91
HPS3-206ENST00000486530 ISL2Q96A47 359 aa20.71■□□□□ 0.91
HPS3-206ENST00000486530 PAWRQ96IZ0 340 aaKnown RBP20.71■□□□□ 0.91
HPS3-206ENST00000486530 LRRC37BQ96QE4 947 aa20.71■□□□□ 0.91
HPS3-206ENST00000486530 CDK5RAP1Q96SZ6 601 aaKnown RBP20.71■□□□□ 0.91
HPS3-206ENST00000486530 TTLL2Q9BWV7 592 aa20.71■□□□□ 0.91
HPS3-206ENST00000486530 ENTPD7Q9NQZ7 604 aa20.71■□□□□ 0.91
HPS3-206ENST00000486530 CHRAC1Q9NRG0 131 aa20.71■□□□□ 0.91
HPS3-206ENST00000486530 MTRRQ9UBK8 725 aa20.71■□□□□ 0.91
HPS3-206ENST00000486530 DCDC2Q9UHG0 476 aa20.71■□□□□ 0.91
HPS3-206ENST00000486530 CFAP73A6NFT4 308 aa20.71■□□□□ 0.91
HPS3-206ENST00000486530 CLTBP09497 229 aa20.71■□□□□ 0.91
HPS3-206ENST00000486530 ALDH7A1P49419 539 aaKnown RBP20.71■□□□□ 0.91
HPS3-206ENST00000486530 LIMK2P53671 638 aa20.71■□□□□ 0.91
HPS3-206ENST00000486530 CSE1LP55060 971 aaKnown RBP20.71■□□□□ 0.91
HPS3-206ENST00000486530 HNRNPDQ14103 355 aaKnown RBP20.71■□□□□ 0.91
HPS3-206ENST00000486530 PDE1CQ14123 709 aaPredicted RBP20.71■□□□□ 0.91
HPS3-206ENST00000486530 USP41Q3LFD5 358 aa20.71■□□□□ 0.91
HPS3-206ENST00000486530 PCID2Q5JVF3 399 aa20.71■□□□□ 0.91
HPS3-206ENST00000486530 TFAP2DQ7Z6R9 452 aa20.71■□□□□ 0.91
HPS3-206ENST00000486530 STRA8Q7Z7C7 330 aa20.71■□□□□ 0.91
HPS3-206ENST00000486530 NUDCD3Q8IVD9 361 aa20.71■□□□□ 0.91
HPS3-206ENST00000486530 E2F7Q96AV8 911 aa20.71■□□□□ 0.91
HPS3-206ENST00000486530 FICDQ9BVA6 458 aa20.71■□□□□ 0.91
HPS3-206ENST00000486530 UBE2OQ9C0C9 1292 aaKnown RBP20.71■□□□□ 0.91
HPS3-206ENST00000486530 ECT2Q9H8V3 914 aa20.71■□□□□ 0.91
HPS3-206ENST00000486530 C20orf96Q9NUD7 363 aaPredicted RBP20.71■□□□□ 0.91
HPS3-206ENST00000486530 NSMCE4AQ9NXX6 385 aa20.71■□□□□ 0.91
HPS3-206ENST00000486530 TLR5O60602 858 aa20.7■□□□□ 0.9
HPS3-206ENST00000486530 EFEMP2O95967 443 aa20.7■□□□□ 0.9
HPS3-206ENST00000486530 BPGMP07738 259 aa20.7■□□□□ 0.9
HPS3-206ENST00000486530 ATF6P18850 670 aa20.7■□□□□ 0.9
HPS3-206ENST00000486530 ADRA1AP35348 466 aa20.7■□□□□ 0.9
HPS3-206ENST00000486530 SKIV2L2P42285 1042 aaKnown RBP20.7■□□□□ 0.9
HPS3-206ENST00000486530 RENBPP51606 427 aa20.7■□□□□ 0.9
HPS3-206ENST00000486530 NCALDP61601 193 aa20.7■□□□□ 0.9
HPS3-206ENST00000486530 SMAD1Q15797 465 aaKnown RBP20.7■□□□□ 0.9
HPS3-206ENST00000486530 INSCQ1MX18 579 aa20.7■□□□□ 0.9
HPS3-206ENST00000486530 ALFQ53S48 1182 aa20.7■□□□□ 0.9
HPS3-206ENST00000486530 FBXW10Q5XX13 1052 aa20.7■□□□□ 0.9
HPS3-206ENST00000486530 RAP1GAP2Q684P5 730 aa20.7■□□□□ 0.9
HPS3-206ENST00000486530 PDPK2PQ6A1A2 396 aa20.7■□□□□ 0.9
HPS3-206ENST00000486530 FBXL22Q6P050 247 aa20.7■□□□□ 0.9
HPS3-206ENST00000486530 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.7■□□□□ 0.9
HPS3-206ENST00000486530 GIPC2Q8TF65 315 aa20.7■□□□□ 0.9
HPS3-206ENST00000486530 PTCD2Q8WV60 388 aaKnown RBP20.7■□□□□ 0.9
HPS3-206ENST00000486530 HMCESQ96FZ2 354 aa20.7■□□□□ 0.9
HPS3-206ENST00000486530 MECRQ9BV79 373 aa20.7■□□□□ 0.9
HPS3-206ENST00000486530 FSD1LQ9BXM9 530 aa20.7■□□□□ 0.9
HPS3-206ENST00000486530 MYLK2Q9H1R3 596 aa20.7■□□□□ 0.9
HPS3-206ENST00000486530 C11orf49Q9H6J7 331 aa20.7■□□□□ 0.9
HPS3-206ENST00000486530 SLC40A1Q9NP59 571 aa20.7■□□□□ 0.9
HPS3-206ENST00000486530 MAGED2Q9UNF1 606 aaPredicted RBP20.7■□□□□ 0.9
HPS3-206ENST00000486530 CHKBQ9Y259 395 aa20.7■□□□□ 0.9
HPS3-206ENST00000486530 BACE2Q9Y5Z0 518 aa20.7■□□□□ 0.9
HPS3-206ENST00000486530 MRPL42Q9Y6G3 142 aaKnown RBP20.7■□□□□ 0.9
HPS3-206ENST00000486530 DRGXA6NNA5 263 aa20.69■□□□□ 0.9
HPS3-206ENST00000486530 CNTN5O94779 1100 aa20.69■□□□□ 0.9
HPS3-206ENST00000486530 UPP2O95045 317 aa20.69■□□□□ 0.9
HPS3-206ENST00000486530 PEX11BO96011 259 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms