RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 NAT6Q93015 286 aa8.53□□□□□ -1.04
XRN1-212ENST00000486211 FOXP3Q9BZS1 431 aa8.53□□□□□ -1.04
XRN1-212ENST00000486211 VRTNQ9H8Y1 702 aa8.53□□□□□ -1.04
XRN1-212ENST00000486211 MRPL44Q9H9J2 332 aaKnown RBP8.53□□□□□ -1.04
XRN1-212ENST00000486211 FZD3Q9NPG1 666 aa8.53□□□□□ -1.04
XRN1-212ENST00000486211 TBC1D7Q9P0N9 293 aa8.53□□□□□ -1.04
XRN1-212ENST00000486211 SLCO3A1Q9UIG8 710 aa8.53□□□□□ -1.04
XRN1-212ENST00000486211 ERVW-1Q9UQF0 538 aa8.53□□□□□ -1.04
XRN1-212ENST00000486211 PRR19A6NJB7 356 aa8.52□□□□□ -1.05
XRN1-212ENST00000486211 TPP1O14773 563 aa8.52□□□□□ -1.05
XRN1-212ENST00000486211 KIAA0391O15091 583 aaKnown RBP8.52□□□□□ -1.05
XRN1-212ENST00000486211 SLC31A1O15431 190 aa8.52□□□□□ -1.05
XRN1-212ENST00000486211 DDAH2O95865 285 aa8.52□□□□□ -1.05
XRN1-212ENST00000486211 JMJD7P0C870 316 aa8.52□□□□□ -1.05
XRN1-212ENST00000486211 VAV1P15498 845 aa8.52□□□□□ -1.05
XRN1-212ENST00000486211 ADORA2BP29275 332 aa8.52□□□□□ -1.05
XRN1-212ENST00000486211 ATICP31939 592 aa8.52□□□□□ -1.05
XRN1-212ENST00000486211 MARSP56192 900 aaKnown RBP8.52□□□□□ -1.05
XRN1-212ENST00000486211 CLDN2P57739 230 aa8.52□□□□□ -1.05
XRN1-212ENST00000486211 CNTN1Q12860 1018 aa8.52□□□□□ -1.05
XRN1-212ENST00000486211 KLRB1Q12918 225 aa8.52□□□□□ -1.05
XRN1-212ENST00000486211 ELAVL3Q14576 367 aaKnown RBP8.52□□□□□ -1.05
XRN1-212ENST00000486211 ZNF284Q2VY69 593 aa8.52□□□□□ -1.05
XRN1-212ENST00000486211 MPP7Q5T2T1 576 aa8.52□□□□□ -1.05
XRN1-212ENST00000486211 ADGRF1Q5T601 910 aa8.52□□□□□ -1.05
XRN1-212ENST00000486211 GALNT11Q8NCW6 608 aa8.52□□□□□ -1.05
XRN1-212ENST00000486211 KLK6Q92876 244 aa8.52□□□□□ -1.05
XRN1-212ENST00000486211 ELMO3Q96BJ8 720 aa8.52□□□□□ -1.05
XRN1-212ENST00000486211 ABHD17AQ96GS6 310 aa8.52□□□□□ -1.05
XRN1-212ENST00000486211 CGRRF1Q99675 332 aa8.52□□□□□ -1.05
XRN1-212ENST00000486211 STRADBQ9C0K7 418 aa8.52□□□□□ -1.05
XRN1-212ENST00000486211 SARDHQ9UL12 918 aa8.52□□□□□ -1.05
XRN1-212ENST00000486211 STRIP2Q9ULQ0 834 aa8.52□□□□□ -1.05
XRN1-212ENST00000486211 LOXL2Q9Y4K0 774 aa8.52□□□□□ -1.05
XRN1-212ENST00000486211 PCDHB11Q9Y5F2 797 aa8.52□□□□□ -1.05
XRN1-212ENST00000486211 CELSR1Q9NYQ6 3014 aa8.51□□□□□ -1.05
XRN1-212ENST00000486211 SDK2Q58EX2 2172 aa8.51□□□□□ -1.05
XRN1-212ENST00000486211 HIVEP1P15822 2718 aa8.51□□□□□ -1.05
XRN1-212ENST00000486211 A0A087X0B3 334 aa8.51□□□□□ -1.05
XRN1-212ENST00000486211 A0A1W2PQM1 296 aa8.51□□□□□ -1.05
XRN1-212ENST00000486211 TMX2-CTNND1H3BSU7 103 aa8.51□□□□□ -1.05
XRN1-212ENST00000486211 AQP9O43315 295 aa8.51□□□□□ -1.05
XRN1-212ENST00000486211 TBL1XO60907 577 aa8.51□□□□□ -1.05
XRN1-212ENST00000486211 GCNT3O95395 438 aa8.51□□□□□ -1.05
XRN1-212ENST00000486211 LATS1O95835 1130 aa8.51□□□□□ -1.05
XRN1-212ENST00000486211 SRPRAP08240 638 aaKnown RBP8.51□□□□□ -1.05
XRN1-212ENST00000486211 FBXO45P0C2W1 286 aa8.51□□□□□ -1.05
XRN1-212ENST00000486211 DLATP10515 647 aaKnown RBP8.51□□□□□ -1.05
XRN1-212ENST00000486211 ITGB7P26010 798 aa8.51□□□□□ -1.05
XRN1-212ENST00000486211 CD82P27701 267 aa8.51□□□□□ -1.05
XRN1-212ENST00000486211 SLC6A4P31645 630 aa8.51□□□□□ -1.05
XRN1-212ENST00000486211 PTGIRP43119 386 aa8.51□□□□□ -1.05
XRN1-212ENST00000486211 NDST1P52848 882 aa8.51□□□□□ -1.05
XRN1-212ENST00000486211 PSMD6Q15008 389 aa8.51□□□□□ -1.05
XRN1-212ENST00000486211 LACTB2Q53H82 288 aaPredicted RBP8.51□□□□□ -1.05
XRN1-212ENST00000486211 PIK3R6Q5UE93 754 aa8.51□□□□□ -1.05
XRN1-212ENST00000486211 OR6B2Q6IFH4 312 aa8.51□□□□□ -1.05
XRN1-212ENST00000486211 RFWD3Q6PCD5 774 aa8.51□□□□□ -1.05
XRN1-212ENST00000486211 SCARA5Q6ZMJ2 495 aa8.51□□□□□ -1.05
XRN1-212ENST00000486211 Q6ZSR6 202 aa8.51□□□□□ -1.05
XRN1-212ENST00000486211 SYCP3Q8IZU3 236 aa8.51□□□□□ -1.05
XRN1-212ENST00000486211 FIBINQ8TAL6 211 aa8.51□□□□□ -1.05
XRN1-212ENST00000486211 JPH3Q8WXH2 748 aaPredicted RBP8.51□□□□□ -1.05
XRN1-212ENST00000486211 LARP4BQ92615 738 aaKnown RBP8.51□□□□□ -1.05
XRN1-212ENST00000486211 USP7Q93009 1102 aa8.51□□□□□ -1.05
XRN1-212ENST00000486211 SYAP1Q96A49 352 aaPredicted RBP8.51□□□□□ -1.05
XRN1-212ENST00000486211 DNAJC19Q96DA6 116 aa8.51□□□□□ -1.05
XRN1-212ENST00000486211 CALML4Q96GE6 196 aa8.51□□□□□ -1.05
XRN1-212ENST00000486211 POM121Q96HA1 1249 aa8.51□□□□□ -1.05
XRN1-212ENST00000486211 PPP1R13BQ96KQ4 1090 aa8.51□□□□□ -1.05
XRN1-212ENST00000486211 BMFQ96LC9 184 aa8.51□□□□□ -1.05
XRN1-212ENST00000486211 SYNDIG1Q9H7V2 258 aa8.51□□□□□ -1.05
XRN1-212ENST00000486211 OLFML3Q9NRN5 406 aa8.51□□□□□ -1.05
XRN1-212ENST00000486211 PDZD2O15018 2839 aa8.51□□□□□ -1.05
XRN1-212ENST00000486211 SPTY2D1-AS1A0A0U1RR47 76 aa8.5□□□□□ -1.05
XRN1-212ENST00000486211 A0A1W2PQU0 124 aa8.5□□□□□ -1.05
XRN1-212ENST00000486211 K7EM74 188 aa8.5□□□□□ -1.05
XRN1-212ENST00000486211 LILRA1O75019 489 aa8.5□□□□□ -1.05
XRN1-212ENST00000486211 VPS4BO75351 444 aa8.5□□□□□ -1.05
XRN1-212ENST00000486211 GCATO75600 419 aa8.5□□□□□ -1.05
XRN1-212ENST00000486211 SLFN14P0C7P3 912 aa8.5□□□□□ -1.05
XRN1-212ENST00000486211 PRF1P14222 555 aa8.5□□□□□ -1.05
XRN1-212ENST00000486211 LIFP15018 202 aa8.5□□□□□ -1.05
XRN1-212ENST00000486211 TNNI1P19237 187 aa8.5□□□□□ -1.05
XRN1-212ENST00000486211 NR1D1P20393 614 aa8.5□□□□□ -1.05
XRN1-212ENST00000486211 HNRNPA2B1P22626 353 aaKnown RBP8.5□□□□□ -1.05
XRN1-212ENST00000486211 AKT2P31751 481 aa8.5□□□□□ -1.05
XRN1-212ENST00000486211 STK19P49842 368 aaPredicted RBP8.5□□□□□ -1.05
XRN1-212ENST00000486211 ARSDP51689 593 aa8.5□□□□□ -1.05
XRN1-212ENST00000486211 MCCD1P59942 119 aaPredicted RBP8.5□□□□□ -1.05
XRN1-212ENST00000486211 CCL7P80098 99 aa8.5□□□□□ -1.05
XRN1-212ENST00000486211 ZFP36L1Q07352 338 aaKnown RBP8.5□□□□□ -1.05
XRN1-212ENST00000486211 TRPC3Q13507 836 aa8.5□□□□□ -1.05
XRN1-212ENST00000486211 FAM133BQ5BKY9 247 aaKnown RBP8.5□□□□□ -1.05
XRN1-212ENST00000486211 FSCBQ5H9T9 825 aa8.5□□□□□ -1.05
XRN1-212ENST00000486211 PITRM1Q5JRX3 1037 aa8.5□□□□□ -1.05
XRN1-212ENST00000486211 TPRG1LQ5T0D9 272 aa8.5□□□□□ -1.05
XRN1-212ENST00000486211 PIP5KL1Q5T9C9 394 aa8.5□□□□□ -1.05
XRN1-212ENST00000486211 ARL6IP4Q66PJ3 421 aaKnown RBP8.5□□□□□ -1.05
XRN1-212ENST00000486211 MMS22LQ6ZRQ5 1243 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms