RNA–Protein interactions for RNA: ENST00000485567.1

FN1-222, Transcript of fibronectin 1, human

TSL 1 (best)

Gene FN1, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-222	ENST00000485567	NEU4	Q8WWR8	484 aa	Predicted RBP	4.38	□□□□□ -1.71
FN1-222	ENST00000485567	PIGK	Q92643	395 aa		4.38	□□□□□ -1.71
FN1-222	ENST00000485567	USP6NL	Q92738	828 aa		4.38	□□□□□ -1.71
FN1-222	ENST00000485567	NSUN4	Q96CB9	384 aa	Known RBP	4.38	□□□□□ -1.71
FN1-222	ENST00000485567	ASB2	Q96Q27	587 aa		4.38	□□□□□ -1.71
FN1-222	ENST00000485567	TEFM	Q96QE5	360 aa	Known RBP	4.38	□□□□□ -1.71
FN1-222	ENST00000485567	FCRL5	Q96RD9	977 aa		4.38	□□□□□ -1.71
FN1-222	ENST00000485567	TM2D2	Q9BX73	214 aa		4.38	□□□□□ -1.71
FN1-222	ENST00000485567	ITPA	Q9BY32	194 aa		4.38	□□□□□ -1.71
FN1-222	ENST00000485567	BRF2	Q9HAW0	419 aa		4.38	□□□□□ -1.71
FN1-222	ENST00000485567	EIF2B3	Q9NR50	452 aa	Known RBP	4.38	□□□□□ -1.71
FN1-222	ENST00000485567	IL17RB	Q9NRM6	502 aa		4.38	□□□□□ -1.71
FN1-222	ENST00000485567	PEMT	Q9UBM1	199 aa		4.38	□□□□□ -1.71
FN1-222	ENST00000485567	POLG2	Q9UHN1	485 aa		4.38	□□□□□ -1.71
FN1-222	ENST00000485567	ICK	Q9UPZ9	632 aa		4.38	□□□□□ -1.71
FN1-222	ENST00000485567	LYVE1	Q9Y5Y7	322 aa		4.38	□□□□□ -1.71
FN1-222	ENST00000485567		A0A087X1B8	175 aa		4.37	□□□□□ -1.71
FN1-222	ENST00000485567	TEX13C	A0A0J9YWL9	993 aa		4.37	□□□□□ -1.71
FN1-222	ENST00000485567	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	4.37	□□□□□ -1.71
FN1-222	ENST00000485567	TCRBV7S3A2	A0A539	114 aa		4.37	□□□□□ -1.71
FN1-222	ENST00000485567	GTPBP1	O00178	669 aa	Known RBP	4.37	□□□□□ -1.71
FN1-222	ENST00000485567	MATN3	O15232	486 aa		4.37	□□□□□ -1.71
FN1-222	ENST00000485567	TGFB1I1	O43294	461 aa		4.37	□□□□□ -1.71
FN1-222	ENST00000485567	FIBP	O43427	364 aa		4.37	□□□□□ -1.71
FN1-222	ENST00000485567	CEP104	O60308	925 aa		4.37	□□□□□ -1.71
FN1-222	ENST00000485567	MLYCD	O95822	493 aa		4.37	□□□□□ -1.71
FN1-222	ENST00000485567	PLAU	P00749	431 aa		4.37	□□□□□ -1.71
FN1-222	ENST00000485567	TFEB	P19484	476 aa		4.37	□□□□□ -1.71
FN1-222	ENST00000485567	MCC	P23508	829 aa		4.37	□□□□□ -1.71
FN1-222	ENST00000485567	MAPK4	P31152	587 aa		4.37	□□□□□ -1.71
FN1-222	ENST00000485567	HOXA7	P31268	230 aa	Predicted RBP	4.37	□□□□□ -1.71
FN1-222	ENST00000485567	CPOX	P36551	454 aa		4.37	□□□□□ -1.71
FN1-222	ENST00000485567	MLH1	P40692	756 aa		4.37	□□□□□ -1.71
FN1-222	ENST00000485567	HSF1	Q00613	529 aa		4.37	□□□□□ -1.71
FN1-222	ENST00000485567	CYP4A11	Q02928	519 aa		4.37	□□□□□ -1.71
FN1-222	ENST00000485567	NEXN	Q0ZGT2	675 aa		4.37	□□□□□ -1.71
FN1-222	ENST00000485567	MTA1	Q13330	715 aa		4.37	□□□□□ -1.71
FN1-222	ENST00000485567	TOMM20	Q15388	145 aa		4.37	□□□□□ -1.71
FN1-222	ENST00000485567	CCNG2	Q16589	344 aa		4.37	□□□□□ -1.71
FN1-222	ENST00000485567	PROSER3	Q2NL68	480 aa		4.37	□□□□□ -1.71
FN1-222	ENST00000485567	C5orf22	Q49AR2	442 aa		4.37	□□□□□ -1.71
FN1-222	ENST00000485567	ZNF667	Q5HYK9	610 aa		4.37	□□□□□ -1.71
FN1-222	ENST00000485567	IL20RB	Q6UXL0	311 aa		4.37	□□□□□ -1.71
FN1-222	ENST00000485567	ZNF813	Q6ZN06	617 aa		4.37	□□□□□ -1.71
FN1-222	ENST00000485567	PRSS45	Q7RTY3	260 aa		4.37	□□□□□ -1.71
FN1-222	ENST00000485567	NEK9	Q8TD19	979 aa		4.37	□□□□□ -1.71
FN1-222	ENST00000485567	HDAC7	Q8WUI4	952 aa		4.37	□□□□□ -1.71
FN1-222	ENST00000485567	KLHL29	Q96CT2	875 aa		4.37	□□□□□ -1.71
FN1-222	ENST00000485567	NUDT16L1	Q9BRJ7	211 aa	Known RBP	4.37	□□□□□ -1.71
FN1-222	ENST00000485567	KLK15	Q9H2R5	256 aa		4.37	□□□□□ -1.71
FN1-222	ENST00000485567	MLXIPL	Q9NP71	852 aa		4.37	□□□□□ -1.71
FN1-222	ENST00000485567	ENTPD7	Q9NQZ7	604 aa		4.37	□□□□□ -1.71
FN1-222	ENST00000485567	ATP8A2	Q9NTI2	1148 aa		4.37	□□□□□ -1.71
FN1-222	ENST00000485567	SEMA4G	Q9NTN9	838 aa		4.37	□□□□□ -1.71
FN1-222	ENST00000485567	GRHL1	Q9NZI5	618 aa		4.37	□□□□□ -1.71
FN1-222	ENST00000485567	ARPP21	Q9UBL0	812 aa	Predicted RBP	4.37	□□□□□ -1.71
FN1-222	ENST00000485567	KRTAP9-6	A0A140TA67	174 aa		4.36	□□□□□ -1.71
FN1-222	ENST00000485567	ARHGAP10	A1A4S6	786 aa		4.36	□□□□□ -1.71
FN1-222	ENST00000485567	PABPN1L	A6NDY0	278 aa	Known RBP	4.36	□□□□□ -1.71
FN1-222	ENST00000485567	TAF4	O00268	1085 aa		4.36	□□□□□ -1.71
FN1-222	ENST00000485567	KIF1C	O43896	1103 aa	Known RBP	4.36	□□□□□ -1.71
FN1-222	ENST00000485567	PROP1	O75360	226 aa		4.36	□□□□□ -1.71
FN1-222	ENST00000485567	RNF8	O76064	485 aa		4.36	□□□□□ -1.71
FN1-222	ENST00000485567	ADA	P00813	363 aa		4.36	□□□□□ -1.71
FN1-222	ENST00000485567	GALT	P07902	379 aa		4.36	□□□□□ -1.71
FN1-222	ENST00000485567	SPARC	P09486	303 aa		4.36	□□□□□ -1.71
FN1-222	ENST00000485567	CYP2A6	P11509	494 aa	Predicted RBP	4.36	□□□□□ -1.71
FN1-222	ENST00000485567	ZNF8	P17098	575 aa	Predicted RBP	4.36	□□□□□ -1.71
FN1-222	ENST00000485567	CDH2	P19022	906 aa	Predicted RBP	4.36	□□□□□ -1.71
FN1-222	ENST00000485567	PROZ	P22891	400 aa		4.36	□□□□□ -1.71
FN1-222	ENST00000485567	CHRNA5	P30532	468 aa		4.36	□□□□□ -1.71
FN1-222	ENST00000485567	FMO4	P31512	558 aa		4.36	□□□□□ -1.71
FN1-222	ENST00000485567	CTCF	P49711	727 aa	Predicted RBP	4.36	□□□□□ -1.71
FN1-222	ENST00000485567	SLC12A2	P55011	1212 aa		4.36	□□□□□ -1.71
FN1-222	ENST00000485567	CUL4A	Q13619	759 aa		4.36	□□□□□ -1.71
FN1-222	ENST00000485567	GSTA3	Q16772	222 aa		4.36	□□□□□ -1.71
FN1-222	ENST00000485567	FBXO43	Q4G163	708 aa		4.36	□□□□□ -1.71
FN1-222	ENST00000485567	KIAA1755	Q5JYT7	1200 aa		4.36	□□□□□ -1.71
FN1-222	ENST00000485567	ZNF362	Q5T0B9	420 aa	Predicted RBP	4.36	□□□□□ -1.71
FN1-222	ENST00000485567	FAM171A1	Q5VUB5	890 aa		4.36	□□□□□ -1.71
FN1-222	ENST00000485567	CDC73	Q6P1J9	531 aa		4.36	□□□□□ -1.71
FN1-222	ENST00000485567	OLFML1	Q6UWY5	402 aa		4.36	□□□□□ -1.71
FN1-222	ENST00000485567	UBE2Q1	Q7Z7E8	422 aa		4.36	□□□□□ -1.71
FN1-222	ENST00000485567	AMIGO2	Q86SJ2	522 aa		4.36	□□□□□ -1.71
FN1-222	ENST00000485567	TADA2B	Q86TJ2	420 aa		4.36	□□□□□ -1.71
FN1-222	ENST00000485567	KRTAP1-3	Q8IUG1	177 aa		4.36	□□□□□ -1.71
FN1-222	ENST00000485567	GHDC	Q8N2G8	530 aa		4.36	□□□□□ -1.71
FN1-222	ENST00000485567	TMEM217	Q8N7C4	229 aa		4.36	□□□□□ -1.71
FN1-222	ENST00000485567	PNLDC1	Q8NA58	520 aa	Known RBP	4.36	□□□□□ -1.71
FN1-222	ENST00000485567	IP6K1	Q92551	441 aa		4.36	□□□□□ -1.71
FN1-222	ENST00000485567	ERP27	Q96DN0	273 aa		4.36	□□□□□ -1.71
FN1-222	ENST00000485567	SERINC2	Q96SA4	455 aa		4.36	□□□□□ -1.71
FN1-222	ENST00000485567	IFT27	Q9BW83	186 aa		4.36	□□□□□ -1.71
FN1-222	ENST00000485567	FRMD8	Q9BZ67	464 aa	Predicted RBP	4.36	□□□□□ -1.71
FN1-222	ENST00000485567	SYNC	Q9H7C4	482 aa		4.36	□□□□□ -1.71
FN1-222	ENST00000485567	PCDHB16	Q9NRJ7	776 aa		4.36	□□□□□ -1.71
FN1-222	ENST00000485567	HAUS2	Q9NVX0	235 aa		4.36	□□□□□ -1.71
FN1-222	ENST00000485567	HCFC1R1	Q9NWW0	138 aa		4.36	□□□□□ -1.71
FN1-222	ENST00000485567	ASB6	Q9NWX5	421 aa		4.36	□□□□□ -1.71
FN1-222	ENST00000485567	NLK	Q9UBE8	527 aa		4.36	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 113.8 ms