RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 IL31Q6EBC2 164 aa14.84□□□□□ -0.03
LRIF1-202ENST00000485275 HIBCHQ6NVY1 386 aaPredicted RBP14.84□□□□□ -0.03
LRIF1-202ENST00000485275 PGBD5Q8N414 524 aa14.84□□□□□ -0.03
LRIF1-202ENST00000485275 DEFB123Q8N688 67 aa14.84□□□□□ -0.03
LRIF1-202ENST00000485275 FIBINQ8TAL6 211 aa14.84□□□□□ -0.03
LRIF1-202ENST00000485275 AENQ8WTP8 325 aaKnown RBP14.84□□□□□ -0.03
LRIF1-202ENST00000485275 CHFRQ96EP1 664 aa14.84□□□□□ -0.03
LRIF1-202ENST00000485275 TEKT5Q96M29 485 aa14.84□□□□□ -0.03
LRIF1-202ENST00000485275 MUC3BQ9H195 1237 aa14.84□□□□□ -0.03
LRIF1-202ENST00000485275 SP110Q9HB58 689 aa14.84□□□□□ -0.03
LRIF1-202ENST00000485275 ETNK1Q9HBU6 452 aa14.84□□□□□ -0.03
LRIF1-202ENST00000485275 ATP13A1Q9HD20 1204 aa14.84□□□□□ -0.03
LRIF1-202ENST00000485275 FAM114A2Q9NRY5 505 aa14.84□□□□□ -0.03
LRIF1-202ENST00000485275 WHRNQ9P202 907 aa14.84□□□□□ -0.03
LRIF1-202ENST00000485275 PAK5Q9P286 719 aa14.84□□□□□ -0.03
LRIF1-202ENST00000485275 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.83□□□□□ -0.03
LRIF1-202ENST00000485275 MUSKO15146 869 aa14.83□□□□□ -0.03
LRIF1-202ENST00000485275 MBTPS2O43462 519 aa14.83□□□□□ -0.03
LRIF1-202ENST00000485275 OPHN1O60890 802 aa14.83□□□□□ -0.03
LRIF1-202ENST00000485275 CYBBP04839 570 aa14.83□□□□□ -0.03
LRIF1-202ENST00000485275 BASP1P80723 227 aaKnown RBP14.83□□□□□ -0.03
LRIF1-202ENST00000485275 IL10RBQ08334 325 aa14.83□□□□□ -0.03
LRIF1-202ENST00000485275 HLTFQ14527 1009 aaKnown RBP eCLIP14.83□□□□□ -0.033e-6■■□□□ 11.6
LRIF1-202ENST00000485275 IHHQ14623 411 aa14.83□□□□□ -0.03
LRIF1-202ENST00000485275 KCNJ11Q14654 390 aa14.83□□□□□ -0.03
LRIF1-202ENST00000485275 FUT11Q495W5 492 aa14.83□□□□□ -0.03
LRIF1-202ENST00000485275 HABP4Q5JVS0 413 aaKnown RBP14.83□□□□□ -0.03
LRIF1-202ENST00000485275 NAIF1Q69YI7 327 aaPredicted RBP14.83□□□□□ -0.03
LRIF1-202ENST00000485275 GPR153Q6NV75 609 aa14.83□□□□□ -0.03
LRIF1-202ENST00000485275 ZNF354CQ86Y25 554 aa14.83□□□□□ -0.03
LRIF1-202ENST00000485275 LRRC49Q8IUZ0 686 aa14.83□□□□□ -0.03
LRIF1-202ENST00000485275 MFSD6LQ8IWD5 586 aa14.83□□□□□ -0.03
LRIF1-202ENST00000485275 KIAA1958Q8N8K9 716 aa14.83□□□□□ -0.03
LRIF1-202ENST00000485275 NAT16Q8N8M0 369 aa14.83□□□□□ -0.03
LRIF1-202ENST00000485275 NAT8LQ8N9F0 302 aa14.83□□□□□ -0.03
LRIF1-202ENST00000485275 CCHCR1Q8TD31 782 aa14.83□□□□□ -0.03
LRIF1-202ENST00000485275 PRCCQ92733 491 aaPredicted RBP14.83□□□□□ -0.03
LRIF1-202ENST00000485275 FATE1Q969F0 183 aa14.83□□□□□ -0.03
LRIF1-202ENST00000485275 GDAP1L1Q96MZ0 367 aa14.83□□□□□ -0.03
LRIF1-202ENST00000485275 NECTIN4Q96NY8 510 aa14.83□□□□□ -0.03
LRIF1-202ENST00000485275 SPON2Q9BUD6 331 aa14.83□□□□□ -0.03
LRIF1-202ENST00000485275 RAB6BQ9NRW1 208 aa14.83□□□□□ -0.03
LRIF1-202ENST00000485275 ABCB8Q9NUT2 735 aa14.83□□□□□ -0.03
LRIF1-202ENST00000485275 KLHL8Q9P2G9 620 aaPredicted RBP14.83□□□□□ -0.03
LRIF1-202ENST00000485275 EPS15L1Q9UBC2 864 aa14.83□□□□□ -0.03
LRIF1-202ENST00000485275 VPS51Q9UID3 782 aa14.83□□□□□ -0.03
LRIF1-202ENST00000485275 CBX4O00257 560 aa14.83□□□□□ -0.04
LRIF1-202ENST00000485275 ARNTLO00327 626 aa14.83□□□□□ -0.04
LRIF1-202ENST00000485275 SLC9A3R1O14745 358 aaPredicted RBP14.83□□□□□ -0.04
LRIF1-202ENST00000485275 KDELR3O43731 214 aa14.83□□□□□ -0.04
LRIF1-202ENST00000485275 NFKB1P19838 968 aa14.83□□□□□ -0.04
LRIF1-202ENST00000485275 IFNAR2P48551 515 aa14.83□□□□□ -0.04
LRIF1-202ENST00000485275 HTR4Q13639 388 aa14.83□□□□□ -0.04
LRIF1-202ENST00000485275 TIGD7Q6NT04 549 aaPredicted RBP14.83□□□□□ -0.04
LRIF1-202ENST00000485275 LINGO4Q6UY18 593 aa14.83□□□□□ -0.04
LRIF1-202ENST00000485275 ZNF783Q6ZMS7 281 aa14.83□□□□□ -0.04
LRIF1-202ENST00000485275 OTOP3Q7RTS5 596 aa14.83□□□□□ -0.04
LRIF1-202ENST00000485275 TEX26Q8N6G2 289 aa14.83□□□□□ -0.04
LRIF1-202ENST00000485275 ELSPBP1Q96BH3 223 aa14.83□□□□□ -0.04
LRIF1-202ENST00000485275 GBA3Q9H227 469 aa14.83□□□□□ -0.04
LRIF1-202ENST00000485275 VPS28Q9UK41 221 aa14.83□□□□□ -0.04
LRIF1-202ENST00000485275 TPX2Q9ULW0 747 aaKnown RBP14.83□□□□□ -0.04
LRIF1-202ENST00000485275 NUMBLQ9Y6R0 609 aa14.83□□□□□ -0.04
LRIF1-202ENST00000485275 TICRRQ7Z2Z1 1910 aa14.82□□□□□ -0.04
LRIF1-202ENST00000485275 CCDC151A5D8V7 595 aa14.82□□□□□ -0.04
LRIF1-202ENST00000485275 C2CD4DB7Z1M9 353 aa14.82□□□□□ -0.04
LRIF1-202ENST00000485275 HOXC11O43248 304 aaPredicted RBP14.82□□□□□ -0.04
LRIF1-202ENST00000485275 MTSS1O43312 755 aa14.82□□□□□ -0.04
LRIF1-202ENST00000485275 CACNG3O60359 315 aa14.82□□□□□ -0.04
LRIF1-202ENST00000485275 ADH5P11766 374 aa14.82□□□□□ -0.04
LRIF1-202ENST00000485275 ITIH2P19823 946 aa14.82□□□□□ -0.04
LRIF1-202ENST00000485275 MAXP61244 160 aa14.82□□□□□ -0.04
LRIF1-202ENST00000485275 SMAD4Q13485 552 aaKnown RBP14.82□□□□□ -0.04
LRIF1-202ENST00000485275 OLIG2Q13516 323 aa14.82□□□□□ -0.04
LRIF1-202ENST00000485275 SEMA5AQ13591 1074 aa14.82□□□□□ -0.04
LRIF1-202ENST00000485275 HNRNPDQ14103 355 aaKnown RBP14.82□□□□□ -0.04
LRIF1-202ENST00000485275 SKIV2LQ15477 1246 aaKnown RBP14.82□□□□□ -0.04
LRIF1-202ENST00000485275 PLEKHG6Q3KR16 790 aa14.82□□□□□ -0.04
LRIF1-202ENST00000485275 UBAP2Q5T6F2 1119 aaKnown RBP14.82□□□□□ -0.04
LRIF1-202ENST00000485275 TMEM215Q68D42 235 aa14.82□□□□□ -0.04
LRIF1-202ENST00000485275 ARHGEF18Q6ZSZ5 1173 aa14.82□□□□□ -0.04
LRIF1-202ENST00000485275 ZNF534Q76KX8 674 aa14.82□□□□□ -0.04
LRIF1-202ENST00000485275 PID1Q7Z2X4 250 aa14.82□□□□□ -0.04
LRIF1-202ENST00000485275 ETFBKMTQ8IXQ9 262 aa14.82□□□□□ -0.04
LRIF1-202ENST00000485275 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.82□□□□□ -0.04
LRIF1-202ENST00000485275 DCAF4L2Q8NA75 395 aa14.82□□□□□ -0.04
LRIF1-202ENST00000485275 OXNAD1Q96HP4 312 aaPredicted RBP14.82□□□□□ -0.04
LRIF1-202ENST00000485275 MLPHQ9BV36 600 aaPredicted RBP14.82□□□□□ -0.04
LRIF1-202ENST00000485275 RBM22Q9NW64 420 aaKnown RBP eCLIP14.82□□□□□ -0.04
LRIF1-202ENST00000485275 GTSE1Q9NYZ3 720 aa14.82□□□□□ -0.04
LRIF1-202ENST00000485275 IGSF9Q9P2J2 1179 aa14.82□□□□□ -0.04
LRIF1-202ENST00000485275 MUC22E2RYF6 1773 aaPredicted RBP14.81□□□□□ -0.04
LRIF1-202ENST00000485275 TTC24A2A3L6 582 aaPredicted RBP14.81□□□□□ -0.04
LRIF1-202ENST00000485275 ANHXE9PGG2 379 aa14.81□□□□□ -0.04
LRIF1-202ENST00000485275 GOLGA8MH3BSY2 632 aa14.81□□□□□ -0.04
LRIF1-202ENST00000485275 DYNC1I1O14576 645 aa14.81□□□□□ -0.04
LRIF1-202ENST00000485275 MT-CO1P00395 513 aa14.81□□□□□ -0.04
LRIF1-202ENST00000485275 PSMC3P17980 439 aa14.81□□□□□ -0.04
LRIF1-202ENST00000485275 ETFBP38117 255 aa14.81□□□□□ -0.04
LRIF1-202ENST00000485275 CTSOP43234 321 aaPredicted RBP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms