RNA–Protein interactions for RNA: ENST00000484520.1

SPTA1-206, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-206ENST00000484520 SHC3Q92529 594 aa4.55□□□□□ -1.68
SPTA1-206ENST00000484520 PPP1R13BQ96KQ4 1090 aa4.55□□□□□ -1.68
SPTA1-206ENST00000484520 CRACR2AQ9BSW2 395 aa4.55□□□□□ -1.68
SPTA1-206ENST00000484520 IFIH1Q9BYX4 1025 aaKnown RBP4.55□□□□□ -1.68
SPTA1-206ENST00000484520 ZNF518BQ9C0D4 1074 aa4.55□□□□□ -1.68
SPTA1-206ENST00000484520 SENP6Q9GZR1 1112 aaPredicted RBP4.55□□□□□ -1.68
SPTA1-206ENST00000484520 ENKD1Q9H0I2 346 aa4.55□□□□□ -1.68
SPTA1-206ENST00000484520 STARD7Q9NQZ5 370 aa4.55□□□□□ -1.68
SPTA1-206ENST00000484520 SYBUQ9NX95 663 aa4.55□□□□□ -1.68
SPTA1-206ENST00000484520 DNAJC12Q9UKB3 198 aa4.55□□□□□ -1.68
SPTA1-206ENST00000484520 OGDHLQ9ULD0 1010 aa4.55□□□□□ -1.68
SPTA1-206ENST00000484520 KIAA1257Q9ULG3 409 aa4.55□□□□□ -1.68
SPTA1-206ENST00000484520 UBQLN1Q9UMX0 589 aaKnown RBP4.55□□□□□ -1.68
SPTA1-206ENST00000484520 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.55□□□□□ -1.68
SPTA1-206ENST00000484520 PIN4Q9Y237 131 aaKnown RBP4.55□□□□□ -1.68
SPTA1-206ENST00000484520 PCDHB2Q9Y5E7 798 aa4.55□□□□□ -1.68
SPTA1-206ENST00000484520 PLXNA1Q9UIW2 1896 aa4.54□□□□□ -1.68
SPTA1-206ENST00000484520 UMODL1Q5DID0 1318 aa4.54□□□□□ -1.68
SPTA1-206ENST00000484520 A0A0A6YYJ9 748 aa4.54□□□□□ -1.68
SPTA1-206ENST00000484520 ANO9A1A5B4 782 aa4.54□□□□□ -1.68
SPTA1-206ENST00000484520 GOLGA8IPA6NC78 632 aa4.54□□□□□ -1.68
SPTA1-206ENST00000484520 GOLGA8JA6NMD2 632 aa4.54□□□□□ -1.68
SPTA1-206ENST00000484520 TISP43B9A030 160 aa4.54□□□□□ -1.68
SPTA1-206ENST00000484520 DNAJC6O75061 913 aa4.54□□□□□ -1.68
SPTA1-206ENST00000484520 TACC1O75410 805 aa4.54□□□□□ -1.68
SPTA1-206ENST00000484520 NCR1O76036 304 aa4.54□□□□□ -1.68
SPTA1-206ENST00000484520 LSM8O95777 96 aaKnown RBP4.54□□□□□ -1.68
SPTA1-206ENST00000484520 HLA-DRAP01903 254 aa4.54□□□□□ -1.68
SPTA1-206ENST00000484520 CYP17A1P05093 508 aa4.54□□□□□ -1.68
SPTA1-206ENST00000484520 PAEPP09466 180 aa4.54□□□□□ -1.68
SPTA1-206ENST00000484520 HARSP12081 509 aaKnown RBP4.54□□□□□ -1.68
SPTA1-206ENST00000484520 GZMAP12544 262 aa4.54□□□□□ -1.68
SPTA1-206ENST00000484520 TYRP1P17643 537 aa4.54□□□□□ -1.68
SPTA1-206ENST00000484520 SLC9A1P19634 815 aa4.54□□□□□ -1.68
SPTA1-206ENST00000484520 PTX3P26022 381 aaPredicted RBP4.54□□□□□ -1.68
SPTA1-206ENST00000484520 HOXA11P31270 313 aaPredicted RBP4.54□□□□□ -1.68
SPTA1-206ENST00000484520 RPL9P32969 192 aaKnown RBP4.54□□□□□ -1.68
SPTA1-206ENST00000484520 RFC2P35250 354 aa4.54□□□□□ -1.68
SPTA1-206ENST00000484520 THPOP40225 353 aa4.54□□□□□ -1.68
SPTA1-206ENST00000484520 PTH2RP49190 550 aa4.54□□□□□ -1.68
SPTA1-206ENST00000484520 KRTAP10-9P60411 292 aa4.54□□□□□ -1.68
SPTA1-206ENST00000484520 TNNC1P63316 161 aa4.54□□□□□ -1.68
SPTA1-206ENST00000484520 TFAMQ00059 246 aaKnown RBP4.54□□□□□ -1.68
SPTA1-206ENST00000484520 CDR2Q01850 454 aa4.54□□□□□ -1.68
SPTA1-206ENST00000484520 SERINC3Q13530 473 aa4.54□□□□□ -1.68
SPTA1-206ENST00000484520 CUL2Q13617 745 aa4.54□□□□□ -1.68
SPTA1-206ENST00000484520 DRAP1Q14919 205 aaPredicted RBP4.54□□□□□ -1.68
SPTA1-206ENST00000484520 NAB2Q15742 525 aa4.54□□□□□ -1.68
SPTA1-206ENST00000484520 ZNF699Q32M78 642 aa4.54□□□□□ -1.68
SPTA1-206ENST00000484520 XKR4Q5GH76 650 aa4.54□□□□□ -1.68
SPTA1-206ENST00000484520 ZNF667Q5HYK9 610 aa4.54□□□□□ -1.68
SPTA1-206ENST00000484520 C1orf220Q5T0J3 134 aa4.54□□□□□ -1.68
SPTA1-206ENST00000484520 TWF2Q6IBS0 349 aaKnown RBP4.54□□□□□ -1.68
SPTA1-206ENST00000484520 WDR59Q6PJI9 974 aa4.54□□□□□ -1.68
SPTA1-206ENST00000484520 CRELD2Q6UXH1 353 aaPredicted RBP4.54□□□□□ -1.68
SPTA1-206ENST00000484520 TRAPPC11Q7Z392 1133 aa4.54□□□□□ -1.68
SPTA1-206ENST00000484520 THNSL1Q8IYQ7 743 aa4.54□□□□□ -1.68
SPTA1-206ENST00000484520 FAM71AQ8IYT1 594 aa4.54□□□□□ -1.68
SPTA1-206ENST00000484520 SYCE1Q8N0S2 351 aa4.54□□□□□ -1.68
SPTA1-206ENST00000484520 OR5M3Q8NGP4 307 aa4.54□□□□□ -1.68
SPTA1-206ENST00000484520 LMO3Q8TAP4 145 aa4.54□□□□□ -1.68
SPTA1-206ENST00000484520 TAS1R2Q8TE23 839 aa4.54□□□□□ -1.68
SPTA1-206ENST00000484520 CAVIN3Q969G5 261 aa4.54□□□□□ -1.68
SPTA1-206ENST00000484520 ARMC5Q96C12 935 aa4.54□□□□□ -1.68
SPTA1-206ENST00000484520 VCPIP1Q96JH7 1222 aa4.54□□□□□ -1.68
SPTA1-206ENST00000484520 SNX27Q96L92 541 aa4.54□□□□□ -1.68
SPTA1-206ENST00000484520 UROC1Q96N76 676 aa4.54□□□□□ -1.68
SPTA1-206ENST00000484520 ZNF830Q96NB3 372 aaPredicted RBP4.54□□□□□ -1.68
SPTA1-206ENST00000484520 SOX7Q9BT81 388 aa4.54□□□□□ -1.68
SPTA1-206ENST00000484520 OSBPL6Q9BZF3 934 aa4.54□□□□□ -1.68
SPTA1-206ENST00000484520 PITHD1Q9GZP4 211 aaPredicted RBP4.54□□□□□ -1.68
SPTA1-206ENST00000484520 MINDY3Q9H8M7 445 aa4.54□□□□□ -1.68
SPTA1-206ENST00000484520 PDE11AQ9HCR9 933 aa4.54□□□□□ -1.68
SPTA1-206ENST00000484520 POLD4Q9HCU8 107 aa4.54□□□□□ -1.68
SPTA1-206ENST00000484520 SIX2Q9NPC8 291 aa4.54□□□□□ -1.68
SPTA1-206ENST00000484520 UBE2TQ9NPD8 197 aaPredicted RBP4.54□□□□□ -1.68
SPTA1-206ENST00000484520 NLRC4Q9NPP4 1024 aa4.54□□□□□ -1.68
SPTA1-206ENST00000484520 AKIP1Q9NQ31 210 aa4.54□□□□□ -1.68
SPTA1-206ENST00000484520 TMEM51Q9NW97 253 aa4.54□□□□□ -1.68
SPTA1-206ENST00000484520 PYCARDQ9ULZ3 195 aa4.54□□□□□ -1.68
SPTA1-206ENST00000484520 CNTN6Q9UQ52 1028 aa4.54□□□□□ -1.68
SPTA1-206ENST00000484520 INSL6Q9Y581 213 aa4.54□□□□□ -1.68
SPTA1-206ENST00000484520 TNPO3Q9Y5L0 923 aaKnown RBP4.54□□□□□ -1.68
SPTA1-206ENST00000484520 PTCH2Q9Y6C5 1203 aa4.54□□□□□ -1.68
SPTA1-206ENST00000484520 CDY2AQ9Y6F7 541 aa4.54□□□□□ -1.68
SPTA1-206ENST00000484520 SMCHD1A6NHR9 2005 aa4.54□□□□□ -1.68
SPTA1-206ENST00000484520 ARID2Q68CP9 1835 aa4.53□□□□□ -1.68
SPTA1-206ENST00000484520 A0A0U1RQF3 1178 aa4.53□□□□□ -1.68
SPTA1-206ENST00000484520 CTAGE9A4FU28 777 aa4.53□□□□□ -1.68
SPTA1-206ENST00000484520 MYADML2A6NDP7 307 aa4.53□□□□□ -1.68
SPTA1-206ENST00000484520 RNASET2O00584 256 aaKnown RBP4.53□□□□□ -1.68
SPTA1-206ENST00000484520 NRP1O14786 923 aa4.53□□□□□ -1.68
SPTA1-206ENST00000484520 EPHB6O15197 1021 aa4.53□□□□□ -1.68
SPTA1-206ENST00000484520 INPPL1O15357 1258 aa4.53□□□□□ -1.68
SPTA1-206ENST00000484520 PJA2O43164 708 aa4.53□□□□□ -1.68
SPTA1-206ENST00000484520 B4GALT5O43286 388 aa4.53□□□□□ -1.68
SPTA1-206ENST00000484520 CLSTN1O94985 981 aa4.53□□□□□ -1.68
SPTA1-206ENST00000484520 FSBPO95073 299 aa4.53□□□□□ -1.68
SPTA1-206ENST00000484520 APOL3O95236 402 aa4.53□□□□□ -1.68
SPTA1-206ENST00000484520 GJB1P08034 283 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms