RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 ALOX15BO15296 676 aa11.16□□□□□ -0.62
SMARCC1-205ENST00000483847 NOBOXO60393 691 aa11.16□□□□□ -0.62
SMARCC1-205ENST00000483847 PRR29P0C7W0 189 aa11.16□□□□□ -0.62
SMARCC1-205ENST00000483847 NME1P15531 152 aaKnown RBP11.16□□□□□ -0.62
SMARCC1-205ENST00000483847 BRD2P25440 801 aaKnown RBP11.16□□□□□ -0.62
SMARCC1-205ENST00000483847 RPL13P26373 211 aaKnown RBP11.16□□□□□ -0.62
SMARCC1-205ENST00000483847 HNRNPKP61978 463 aaKnown RBP eCLIP11.16□□□□□ -0.62
SMARCC1-205ENST00000483847 PITX1P78337 314 aaPredicted RBP11.16□□□□□ -0.62
SMARCC1-205ENST00000483847 NUCB2P80303 420 aa11.16□□□□□ -0.62
SMARCC1-205ENST00000483847 CENPCQ03188 943 aa11.16□□□□□ -0.62
SMARCC1-205ENST00000483847 SULT2A1Q06520 285 aa11.16□□□□□ -0.62
SMARCC1-205ENST00000483847 NNTQ13423 1086 aa11.16□□□□□ -0.62
SMARCC1-205ENST00000483847 DEFB133Q30KQ1 61 aa11.16□□□□□ -0.62
SMARCC1-205ENST00000483847 TMEM259Q4ZIN3 620 aa11.16□□□□□ -0.62
SMARCC1-205ENST00000483847 TPRG1LQ5T0D9 272 aa11.16□□□□□ -0.62
SMARCC1-205ENST00000483847 NEK5Q6P3R8 708 aa11.16□□□□□ -0.62
SMARCC1-205ENST00000483847 ZNF574Q6ZN55 896 aaPredicted RBP11.16□□□□□ -0.62
SMARCC1-205ENST00000483847 PTAR1Q7Z6K3 402 aaPredicted RBP11.16□□□□□ -0.62
SMARCC1-205ENST00000483847 GRAMD1AQ96CP6 724 aa11.16□□□□□ -0.62
SMARCC1-205ENST00000483847 PRMT1Q99873 361 aaKnown RBP11.16□□□□□ -0.62
SMARCC1-205ENST00000483847 EVA1BQ9NVM1 165 aa11.16□□□□□ -0.62
SMARCC1-205ENST00000483847 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.16□□□□□ -0.62
SMARCC1-205ENST00000483847 MYO9AB2RTY4 2548 aa11.15□□□□□ -0.62
SMARCC1-205ENST00000483847 CCDC187A0A096LP49 1063 aa11.15□□□□□ -0.62
SMARCC1-205ENST00000483847 SPTY2D1-AS1A0A0U1RR47 76 aa11.15□□□□□ -0.62
SMARCC1-205ENST00000483847 EME2A4GXA9 379 aaPredicted RBP11.15□□□□□ -0.62
SMARCC1-205ENST00000483847 A6NNZ2 444 aa11.15□□□□□ -0.62
SMARCC1-205ENST00000483847 F5H5T6 163 aa11.15□□□□□ -0.62
SMARCC1-205ENST00000483847 MUSKO15146 869 aa11.15□□□□□ -0.62
SMARCC1-205ENST00000483847 RAD51BO15315 384 aa11.15□□□□□ -0.62
SMARCC1-205ENST00000483847 AQP9O43315 295 aa11.15□□□□□ -0.62
SMARCC1-205ENST00000483847 FBXO21O94952 628 aa11.15□□□□□ -0.62
SMARCC1-205ENST00000483847 PCDH8O95206 1070 aa11.15□□□□□ -0.62
SMARCC1-205ENST00000483847 MT-CO1P00395 513 aa11.15□□□□□ -0.62
SMARCC1-205ENST00000483847 APOEP02649 317 aa11.15□□□□□ -0.62
SMARCC1-205ENST00000483847 CSF2P04141 144 aa11.15□□□□□ -0.62
SMARCC1-205ENST00000483847 ITGA2BP08514 1039 aa11.15□□□□□ -0.62
SMARCC1-205ENST00000483847 SLC5A2P31639 672 aa11.15□□□□□ -0.62
SMARCC1-205ENST00000483847 VASPP50552 380 aaPredicted RBP11.15□□□□□ -0.62
SMARCC1-205ENST00000483847 FGL2Q14314 439 aa11.15□□□□□ -0.62
SMARCC1-205ENST00000483847 TMEM270Q6UE05 265 aa11.15□□□□□ -0.62
SMARCC1-205ENST00000483847 USP53Q70EK8 1073 aa11.15□□□□□ -0.62
SMARCC1-205ENST00000483847 SH2D3CQ8N5H7 860 aa11.15□□□□□ -0.62
SMARCC1-205ENST00000483847 OR2A12Q8NGT7 310 aa11.15□□□□□ -0.62
SMARCC1-205ENST00000483847 FAM149B1Q96BN6 582 aa11.15□□□□□ -0.62
SMARCC1-205ENST00000483847 INTS4Q96HW7 963 aaKnown RBP11.15□□□□□ -0.62
SMARCC1-205ENST00000483847 BTN2A3PQ96KV6 586 aa11.15□□□□□ -0.62
SMARCC1-205ENST00000483847 ARHGAP9Q9BRR9 750 aa11.15□□□□□ -0.62
SMARCC1-205ENST00000483847 FEM1AQ9BSK4 669 aa11.15□□□□□ -0.62
SMARCC1-205ENST00000483847 UPF2Q9HAU5 1272 aaKnown RBP11.15□□□□□ -0.62
SMARCC1-205ENST00000483847 ANKMY1Q9P2S6 941 aa11.15□□□□□ -0.62
SMARCC1-205ENST00000483847 SLC25A13Q9UJS0 675 aa11.15□□□□□ -0.62
SMARCC1-205ENST00000483847 KIAA1257Q9ULG3 409 aa11.15□□□□□ -0.62
SMARCC1-205ENST00000483847 COQ4Q9Y3A0 265 aa11.15□□□□□ -0.62
SMARCC1-205ENST00000483847 OR51B4Q9Y5P0 310 aa11.15□□□□□ -0.62
SMARCC1-205ENST00000483847 A0A1B0GVL5 298 aa11.14□□□□□ -0.63
SMARCC1-205ENST00000483847 TCAF2A6NFQ2 919 aa11.14□□□□□ -0.63
SMARCC1-205ENST00000483847 KCNU1A8MYU2 1149 aa11.14□□□□□ -0.63
SMARCC1-205ENST00000483847 K7ERQ8 282 aa11.14□□□□□ -0.63
SMARCC1-205ENST00000483847 SPINT1O43278 529 aa11.14□□□□□ -0.63
SMARCC1-205ENST00000483847 STX10O60499 249 aa11.14□□□□□ -0.63
SMARCC1-205ENST00000483847 TCEA3O75764 348 aa11.14□□□□□ -0.63
SMARCC1-205ENST00000483847 RHOBTB3O94955 611 aa11.14□□□□□ -0.63
SMARCC1-205ENST00000483847 GJB6O95452 261 aa11.14□□□□□ -0.63
SMARCC1-205ENST00000483847 TRUB2O95900 331 aaKnown RBP11.14□□□□□ -0.63
SMARCC1-205ENST00000483847 IGLV3-25P01717 112 aa11.14□□□□□ -0.63
SMARCC1-205ENST00000483847 PAEPP09466 180 aa11.14□□□□□ -0.63
SMARCC1-205ENST00000483847 SRCP12931 536 aa11.14□□□□□ -0.63
SMARCC1-205ENST00000483847 CHRNA3P32297 505 aa11.14□□□□□ -0.63
SMARCC1-205ENST00000483847 MLLT3P42568 568 aaPredicted RBP11.14□□□□□ -0.63
SMARCC1-205ENST00000483847 NR0B2Q15466 257 aa11.14□□□□□ -0.63
SMARCC1-205ENST00000483847 CNGA2Q16280 664 aa11.14□□□□□ -0.63
SMARCC1-205ENST00000483847 DCAF17Q5H9S7 520 aaPredicted RBP11.14□□□□□ -0.63
SMARCC1-205ENST00000483847 TCERG1LQ5VWI1 586 aa11.14□□□□□ -0.63
SMARCC1-205ENST00000483847 FBXL22Q6P050 247 aa11.14□□□□□ -0.63
SMARCC1-205ENST00000483847 B3GNT8Q7Z7M8 397 aa11.14□□□□□ -0.63
SMARCC1-205ENST00000483847 PARGQ86W56 976 aa11.14□□□□□ -0.63
SMARCC1-205ENST00000483847 SLC35F3Q8IY50 421 aa11.14□□□□□ -0.63
SMARCC1-205ENST00000483847 RBFAQ8N0V3 343 aa11.14□□□□□ -0.63
SMARCC1-205ENST00000483847 GUF1Q8N442 669 aaKnown RBP11.14□□□□□ -0.63
SMARCC1-205ENST00000483847 CHST14Q8NCH0 376 aa11.14□□□□□ -0.63
SMARCC1-205ENST00000483847 TPCN2Q8NHX9 752 aa11.14□□□□□ -0.63
SMARCC1-205ENST00000483847 LMX1AQ8TE12 382 aa11.14□□□□□ -0.63
SMARCC1-205ENST00000483847 KAT5Q92993 513 aa11.14□□□□□ -0.63
SMARCC1-205ENST00000483847 SGF29Q96ES7 293 aa11.14□□□□□ -0.63
SMARCC1-205ENST00000483847 HSFY1Q96LI6 401 aa11.14□□□□□ -0.63
SMARCC1-205ENST00000483847 TCEAL2Q9H3H9 227 aaPredicted RBP11.14□□□□□ -0.63
SMARCC1-205ENST00000483847 SYNDIG1Q9H7V2 258 aa11.14□□□□□ -0.63
SMARCC1-205ENST00000483847 SALL4Q9UJQ4 1053 aa11.14□□□□□ -0.63
SMARCC1-205ENST00000483847 VPS28Q9UK41 221 aa11.14□□□□□ -0.63
SMARCC1-205ENST00000483847 HS3ST3A1Q9Y663 406 aa11.14□□□□□ -0.63
SMARCC1-205ENST00000483847 CSNK1G3Q9Y6M4 447 aa11.14□□□□□ -0.63
SMARCC1-205ENST00000483847 TRPM6Q9BX84 2022 aa11.14□□□□□ -0.63
SMARCC1-205ENST00000483847 SPTAN1Q13813 2472 aaKnown RBP11.13□□□□□ -0.63
SMARCC1-205ENST00000483847 H3BM21 787 aa11.13□□□□□ -0.63
SMARCC1-205ENST00000483847 SMAD6O43541 496 aaKnown RBP11.13□□□□□ -0.63
SMARCC1-205ENST00000483847 SNAP91O60641 907 aa11.13□□□□□ -0.63
SMARCC1-205ENST00000483847 GCATO75600 419 aa11.13□□□□□ -0.63
SMARCC1-205ENST00000483847 PAK4O96013 591 aaPredicted RBP11.13□□□□□ -0.63
SMARCC1-205ENST00000483847 AFPP02771 609 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms