RNA–Protein interactions for RNA: ENST00000483412.5

CDK5RAP2-216, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 1 (best)

Gene CDK5RAP2, Length 6,235 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-216ENST00000483412 FKBP1AP62942 108 aaKnown RBP9.69□□□□□ -0.86
CDK5RAP2-216ENST00000483412 LGALS3BPQ08380 585 aa9.69□□□□□ -0.86
CDK5RAP2-216ENST00000483412 SDE2Q6IQ49 451 aa9.69□□□□□ -0.86
CDK5RAP2-216ENST00000483412 NPNTQ6UXI9 565 aa9.69□□□□□ -0.86
CDK5RAP2-216ENST00000483412 ZNF621Q6ZSS3 439 aa9.69□□□□□ -0.86
CDK5RAP2-216ENST00000483412 MSL3Q8N5Y2 521 aaKnown RBP9.69□□□□□ -0.86
CDK5RAP2-216ENST00000483412 LPCAT1Q8NF37 534 aa9.69□□□□□ -0.86
CDK5RAP2-216ENST00000483412 PCYOX1Q9UHG3 505 aa9.69□□□□□ -0.86
CDK5RAP2-216ENST00000483412 GAKO14976 1311 aa9.69□□□□□ -0.86
CDK5RAP2-216ENST00000483412 SF3B1O75533 1304 aaKnown RBP eCLIP9.69□□□□□ -0.861e-6■■■■■ 83.4
CDK5RAP2-216ENST00000483412 RIC1Q4ADV7 1423 aa9.69□□□□□ -0.86
CDK5RAP2-216ENST00000483412 FBXO21O94952 628 aa9.69□□□□□ -0.86
CDK5RAP2-216ENST00000483412 TM4SF1P30408 202 aa9.69□□□□□ -0.86
CDK5RAP2-216ENST00000483412 ANKS6Q68DC2 871 aa9.69□□□□□ -0.86
CDK5RAP2-216ENST00000483412 GPC2Q8N158 579 aa9.69□□□□□ -0.86
CDK5RAP2-216ENST00000483412 PPP1R14AQ96A00 147 aa9.69□□□□□ -0.86
CDK5RAP2-216ENST00000483412 PPP1R14BQ96C90 147 aa9.69□□□□□ -0.86
CDK5RAP2-216ENST00000483412 DGCR14Q96DF8 476 aaKnown RBP9.69□□□□□ -0.86
CDK5RAP2-216ENST00000483412 MAN1C1Q9NR34 630 aa9.69□□□□□ -0.86
CDK5RAP2-216ENST00000483412 SAE1Q9UBE0 346 aaPredicted RBP9.69□□□□□ -0.86
CDK5RAP2-216ENST00000483412 KIF13AQ9H1H9 1805 aa9.69□□□□□ -0.86
CDK5RAP2-216ENST00000483412 BCLAF3A2AJT9 711 aaKnown RBP9.69□□□□□ -0.86
CDK5RAP2-216ENST00000483412 RGSL1A5PLK6 1076 aa9.69□□□□□ -0.86
CDK5RAP2-216ENST00000483412 BTN3A1O00481 513 aa9.69□□□□□ -0.86
CDK5RAP2-216ENST00000483412 ALOX5P09917 674 aa9.69□□□□□ -0.86
CDK5RAP2-216ENST00000483412 GRK4P32298 578 aa9.69□□□□□ -0.86
CDK5RAP2-216ENST00000483412 IDH2P48735 452 aaKnown RBP9.69□□□□□ -0.86
CDK5RAP2-216ENST00000483412 TKTL1P51854 596 aa9.69□□□□□ -0.86
CDK5RAP2-216ENST00000483412 YWHAZP63104 245 aaKnown RBP9.69□□□□□ -0.86
CDK5RAP2-216ENST00000483412 PTSQ03393 145 aa9.69□□□□□ -0.86
CDK5RAP2-216ENST00000483412 STARD3Q14849 445 aa9.69□□□□□ -0.86
CDK5RAP2-216ENST00000483412 FNBP1LQ5T0N5 605 aa9.69□□□□□ -0.86
CDK5RAP2-216ENST00000483412 GATAD2AQ86YP4 633 aa9.69□□□□□ -0.86
CDK5RAP2-216ENST00000483412 ADGRE3Q9BY15 652 aa9.69□□□□□ -0.86
CDK5RAP2-216ENST00000483412 SLITRK2Q9H156 845 aa9.69□□□□□ -0.86
CDK5RAP2-216ENST00000483412 GAS2O43903 313 aaKnown RBP9.68□□□□□ -0.86
CDK5RAP2-216ENST00000483412 EFEMP1Q12805 493 aa9.68□□□□□ -0.86
CDK5RAP2-216ENST00000483412 SPIDRQ14159 915 aa9.68□□□□□ -0.86
CDK5RAP2-216ENST00000483412 TTC23Q5W5X9 447 aa9.68□□□□□ -0.86
CDK5RAP2-216ENST00000483412 ZNF544Q6NX49 715 aa9.68□□□□□ -0.86
CDK5RAP2-216ENST00000483412 AAGABQ6PD74 315 aa9.68□□□□□ -0.86
CDK5RAP2-216ENST00000483412 KBTBD8Q8NFY9 601 aa9.68□□□□□ -0.86
CDK5RAP2-216ENST00000483412 VPS45Q9NRW7 570 aa9.68□□□□□ -0.86
CDK5RAP2-216ENST00000483412 DKK3Q9UBP4 350 aa9.68□□□□□ -0.86
CDK5RAP2-216ENST00000483412 TSPAN16Q9UKR8 245 aa9.68□□□□□ -0.86
CDK5RAP2-216ENST00000483412 IKZF3Q9UKT9 509 aa9.68□□□□□ -0.86
CDK5RAP2-216ENST00000483412 DOLKQ9UPQ8 538 aa9.68□□□□□ -0.86
CDK5RAP2-216ENST00000483412 SPACA6W5XKT8 324 aa9.68□□□□□ -0.86
CDK5RAP2-216ENST00000483412 UPP2O95045 317 aa9.68□□□□□ -0.86
CDK5RAP2-216ENST00000483412 EPN2O95208 641 aa9.68□□□□□ -0.86
CDK5RAP2-216ENST00000483412 ZBTB11O95625 1053 aaPredicted RBP9.68□□□□□ -0.86
CDK5RAP2-216ENST00000483412 YY1P25490 414 aa9.68□□□□□ -0.86
CDK5RAP2-216ENST00000483412 MSLNQ13421 630 aaPredicted RBP9.68□□□□□ -0.86
CDK5RAP2-216ENST00000483412 LPIN1Q14693 890 aa9.68□□□□□ -0.86
CDK5RAP2-216ENST00000483412 NDUFAF6Q330K2 333 aa9.68□□□□□ -0.86
CDK5RAP2-216ENST00000483412 CBWD6Q4V339 395 aa9.68□□□□□ -0.86
CDK5RAP2-216ENST00000483412 TMEM119Q4V9L6 283 aa9.68□□□□□ -0.86
CDK5RAP2-216ENST00000483412 CBWD3Q5JTY5 395 aa9.68□□□□□ -0.86
CDK5RAP2-216ENST00000483412 CBWD5Q5RIA9 395 aa9.68□□□□□ -0.86
CDK5RAP2-216ENST00000483412 ZCCHC8Q6NZY4 707 aaKnown RBP9.68□□□□□ -0.86
CDK5RAP2-216ENST00000483412 FBXO32Q969P5 355 aa9.68□□□□□ -0.86
CDK5RAP2-216ENST00000483412 PWWP2AQ96N64 755 aa9.68□□□□□ -0.86
CDK5RAP2-216ENST00000483412 WDR12Q9GZL7 423 aaKnown RBP9.68□□□□□ -0.86
CDK5RAP2-216ENST00000483412 SLCO1B3Q9NPD5 702 aa9.68□□□□□ -0.86
CDK5RAP2-216ENST00000483412 FBXO6Q9NRD1 293 aaPredicted RBP9.68□□□□□ -0.86
CDK5RAP2-216ENST00000483412 KLHL28Q9NXS3 571 aa9.68□□□□□ -0.86
CDK5RAP2-216ENST00000483412 ING4Q9UNL4 249 aa9.68□□□□□ -0.86
CDK5RAP2-216ENST00000483412 RWDD3Q9Y3V2 267 aa9.68□□□□□ -0.86
CDK5RAP2-216ENST00000483412 CHADO15335 359 aa9.68□□□□□ -0.86
CDK5RAP2-216ENST00000483412 SEMA3DO95025 777 aa9.68□□□□□ -0.86
CDK5RAP2-216ENST00000483412 NUDT17P0C025 328 aa9.68□□□□□ -0.86
CDK5RAP2-216ENST00000483412 SUPT20HL2P0C7V6 817 aa9.68□□□□□ -0.86
CDK5RAP2-216ENST00000483412 ERCC2P18074 760 aa9.68□□□□□ -0.86
CDK5RAP2-216ENST00000483412 CCR1P32246 355 aa9.68□□□□□ -0.86
CDK5RAP2-216ENST00000483412 S100A3P33764 101 aa9.68□□□□□ -0.86
CDK5RAP2-216ENST00000483412 CRADDP78560 199 aa9.68□□□□□ -0.86
CDK5RAP2-216ENST00000483412 PRKCQQ04759 706 aa9.68□□□□□ -0.86
CDK5RAP2-216ENST00000483412 BST1Q10588 318 aa9.68□□□□□ -0.86
CDK5RAP2-216ENST00000483412 SFRP1Q8N474 314 aa9.68□□□□□ -0.86
CDK5RAP2-216ENST00000483412 CAMKK1Q8N5S9 505 aa9.68□□□□□ -0.86
CDK5RAP2-216ENST00000483412 DNAJB14Q8TBM8 379 aa9.68□□□□□ -0.86
CDK5RAP2-216ENST00000483412 MYDGFQ969H8 173 aa9.68□□□□□ -0.86
CDK5RAP2-216ENST00000483412 REXO5Q96IC2 774 aaKnown RBP9.68□□□□□ -0.86
CDK5RAP2-216ENST00000483412 ASB2Q96Q27 587 aa9.68□□□□□ -0.86
CDK5RAP2-216ENST00000483412 ARL8BQ9NVJ2 186 aa9.68□□□□□ -0.86
CDK5RAP2-216ENST00000483412 TUBA8Q9NY65 449 aaPredicted RBP9.68□□□□□ -0.86
CDK5RAP2-216ENST00000483412 MRC1P22897 1456 aa9.68□□□□□ -0.86
CDK5RAP2-216ENST00000483412 DPPA5A6NC42 116 aa9.68□□□□□ -0.86
CDK5RAP2-216ENST00000483412 APOC4-APOC2K7ER74 178 aa9.68□□□□□ -0.86
CDK5RAP2-216ENST00000483412 APOC2P02655 101 aa9.68□□□□□ -0.86
CDK5RAP2-216ENST00000483412 YWHAQP27348 245 aa9.68□□□□□ -0.86
CDK5RAP2-216ENST00000483412 FMO4P31512 558 aa9.68□□□□□ -0.86
CDK5RAP2-216ENST00000483412 GJA8P48165 433 aa9.68□□□□□ -0.86
CDK5RAP2-216ENST00000483412 CLCN3P51790 818 aa9.68□□□□□ -0.86
CDK5RAP2-216ENST00000483412 FCGRTP55899 365 aa9.68□□□□□ -0.86
CDK5RAP2-216ENST00000483412 ZNF268Q14587 947 aaPredicted RBP9.68□□□□□ -0.86
CDK5RAP2-216ENST00000483412 PARP6Q2NL67 630 aa9.68□□□□□ -0.86
CDK5RAP2-216ENST00000483412 GSTCDQ8NEC7 633 aa9.68□□□□□ -0.86
CDK5RAP2-216ENST00000483412 FAR1Q8WVX9 515 aa9.68□□□□□ -0.86
CDK5RAP2-216ENST00000483412 RCN3Q96D15 328 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms