RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 LYSMD2Q8IV50 215 aa7.96□□□□□ -1.14
COL4A5-205ENST00000483338 LRRC20Q8TCA0 184 aa7.96□□□□□ -1.14
COL4A5-205ENST00000483338 KCTD4Q8WVF5 259 aa7.96□□□□□ -1.14
COL4A5-205ENST00000483338 DLG3Q92796 817 aa7.96□□□□□ -1.14
COL4A5-205ENST00000483338 INTS12Q96CB8 462 aaKnown RBP7.96□□□□□ -1.14
COL4A5-205ENST00000483338 CALML4Q96GE6 196 aa7.96□□□□□ -1.14
COL4A5-205ENST00000483338 DMRTB1Q96MA1 342 aa7.96□□□□□ -1.14
COL4A5-205ENST00000483338 SECISBP2Q96T21 854 aaKnown RBP7.96□□□□□ -1.14
COL4A5-205ENST00000483338 WACQ9BTA9 647 aa7.96□□□□□ -1.14
COL4A5-205ENST00000483338 GPR88Q9GZN0 384 aa7.96□□□□□ -1.14
COL4A5-205ENST00000483338 HOMER2Q9NSB8 354 aa7.96□□□□□ -1.14
COL4A5-205ENST00000483338 LAMB1P07942 1786 aa7.96□□□□□ -1.14
COL4A5-205ENST00000483338 USP54Q70EL1 1684 aa7.95□□□□□ -1.14
COL4A5-205ENST00000483338 GSG1L2A8MUP6 293 aa7.95□□□□□ -1.14
COL4A5-205ENST00000483338 LEUTXA8MZ59 168 aa7.95□□□□□ -1.14
COL4A5-205ENST00000483338 FAM25AB3EWG3 89 aa7.95□□□□□ -1.14
COL4A5-205ENST00000483338 FAM25CB3EWG5 89 aa7.95□□□□□ -1.14
COL4A5-205ENST00000483338 FAM25GB3EWG6 89 aa7.95□□□□□ -1.14
COL4A5-205ENST00000483338 PI4K2BG5E9Z4 385 aa7.95□□□□□ -1.14
COL4A5-205ENST00000483338 SOCS2O14508 198 aa7.95□□□□□ -1.14
COL4A5-205ENST00000483338 TOR1AO14656 332 aa7.95□□□□□ -1.14
COL4A5-205ENST00000483338 LRRN2O75325 713 aa7.95□□□□□ -1.14
COL4A5-205ENST00000483338 BCAS1O75363 584 aaPredicted RBP7.95□□□□□ -1.14
COL4A5-205ENST00000483338 RPS6KA4O75676 772 aa7.95□□□□□ -1.14
COL4A5-205ENST00000483338 CLIC3O95833 236 aa7.95□□□□□ -1.14
COL4A5-205ENST00000483338 OR52Z1P0C646 297 aa7.95□□□□□ -1.14
COL4A5-205ENST00000483338 IFI30P13284 250 aa7.95□□□□□ -1.14
COL4A5-205ENST00000483338 CKMT2P17540 419 aa7.95□□□□□ -1.14
COL4A5-205ENST00000483338 CCND2P30279 289 aa7.95□□□□□ -1.14
COL4A5-205ENST00000483338 GHRHRQ02643 423 aa7.95□□□□□ -1.14
COL4A5-205ENST00000483338 AP3B2Q13367 1082 aa7.95□□□□□ -1.14
COL4A5-205ENST00000483338 AGAP6Q5VW22 663 aa7.95□□□□□ -1.14
COL4A5-205ENST00000483338 GADL1Q6ZQY3 521 aa7.95□□□□□ -1.14
COL4A5-205ENST00000483338 ZCCHC23Q6ZST2 131 aa7.95□□□□□ -1.14
COL4A5-205ENST00000483338 C15orf52Q6ZUT6 534 aaKnown RBP7.95□□□□□ -1.14
COL4A5-205ENST00000483338 KCNK18Q7Z418 384 aa7.95□□□□□ -1.14
COL4A5-205ENST00000483338 MAVSQ7Z434 540 aa7.95□□□□□ -1.14
COL4A5-205ENST00000483338 CCNYL1Q8N7R7 359 aa7.95□□□□□ -1.14
COL4A5-205ENST00000483338 SDR42E1Q8WUS8 393 aa7.95□□□□□ -1.14
COL4A5-205ENST00000483338 LPGAT1Q92604 370 aa7.95□□□□□ -1.14
COL4A5-205ENST00000483338 GTF2H4Q92759 462 aa7.95□□□□□ -1.14
COL4A5-205ENST00000483338 GPKOWQ92917 476 aaPredicted RBP eCLIP7.95□□□□□ -1.14
COL4A5-205ENST00000483338 SNAPC3Q92966 411 aa7.95□□□□□ -1.14
COL4A5-205ENST00000483338 AGAP4Q96P64 663 aa7.95□□□□□ -1.14
COL4A5-205ENST00000483338 RTKNQ9BST9 563 aa7.95□□□□□ -1.14
COL4A5-205ENST00000483338 BTBD2Q9BX70 525 aa7.95□□□□□ -1.14
COL4A5-205ENST00000483338 MUC3BQ9H195 1237 aa7.95□□□□□ -1.14
COL4A5-205ENST00000483338 NTN4Q9HB63 628 aa7.95□□□□□ -1.14
COL4A5-205ENST00000483338 ACOXLQ9NUZ1 547 aa7.95□□□□□ -1.14
COL4A5-205ENST00000483338 IPO11Q9UI26 975 aaKnown RBP7.95□□□□□ -1.14
COL4A5-205ENST00000483338 NFASCO94856 1347 aa7.95□□□□□ -1.14
COL4A5-205ENST00000483338 TRAV6A0A075B6T7 132 aa7.95□□□□□ -1.14
COL4A5-205ENST00000483338 SMIM22K7EJ46 135 aa7.95□□□□□ -1.14
COL4A5-205ENST00000483338 TSPAN4O14817 238 aa7.95□□□□□ -1.14
COL4A5-205ENST00000483338 BCAS2O75934 225 aaPredicted RBP7.95□□□□□ -1.14
COL4A5-205ENST00000483338 GOT2P00505 430 aaKnown RBP7.95□□□□□ -1.14
COL4A5-205ENST00000483338 TP53P04637 393 aaPredicted RBP7.95□□□□□ -1.14
COL4A5-205ENST00000483338 GSNP06396 782 aa7.95□□□□□ -1.14
COL4A5-205ENST00000483338 ZSCAN5DPP0CG00 497 aa7.95□□□□□ -1.14
COL4A5-205ENST00000483338 MMP8P22894 467 aa7.95□□□□□ -1.14
COL4A5-205ENST00000483338 NR2F2P24468 414 aa7.95□□□□□ -1.14
COL4A5-205ENST00000483338 DNAJB2P25686 324 aa7.95□□□□□ -1.14
COL4A5-205ENST00000483338 CDH5P33151 784 aaPredicted RBP7.95□□□□□ -1.14
COL4A5-205ENST00000483338 SERPINB5P36952 375 aa7.95□□□□□ -1.14
COL4A5-205ENST00000483338 TCEAL1Q15170 157 aa7.95□□□□□ -1.14
COL4A5-205ENST00000483338 MAPRE2Q15555 327 aa7.95□□□□□ -1.14
COL4A5-205ENST00000483338 FAM26FQ5R3K3 315 aa7.95□□□□□ -1.14
COL4A5-205ENST00000483338 PDPK2PQ6A1A2 396 aa7.95□□□□□ -1.14
COL4A5-205ENST00000483338 SLCO6A1Q86UG4 719 aa7.95□□□□□ -1.14
COL4A5-205ENST00000483338 LACC1Q8IV20 430 aa7.95□□□□□ -1.14
COL4A5-205ENST00000483338 SLC20A1Q8WUM9 679 aa7.95□□□□□ -1.14
COL4A5-205ENST00000483338 DNAJC19Q96DA6 116 aa7.95□□□□□ -1.14
COL4A5-205ENST00000483338 ASB2Q96Q27 587 aa7.95□□□□□ -1.14
COL4A5-205ENST00000483338 RHOBTB2Q9BYZ6 727 aa7.95□□□□□ -1.14
COL4A5-205ENST00000483338 C2orf40Q9H1Z8 148 aa7.95□□□□□ -1.14
COL4A5-205ENST00000483338 JMJD4Q9H9V9 463 aa7.95□□□□□ -1.14
COL4A5-205ENST00000483338 SLC35C2Q9NQQ7 365 aa7.95□□□□□ -1.14
COL4A5-205ENST00000483338 PCDHA8Q9Y5H6 950 aa7.95□□□□□ -1.14
COL4A5-205ENST00000483338 PLCH1Q4KWH8 1693 aa7.95□□□□□ -1.14
COL4A5-205ENST00000483338 A8MV72 311 aaPredicted RBP7.95□□□□□ -1.14
COL4A5-205ENST00000483338 FOXN3O00409 490 aaPredicted RBP7.95□□□□□ -1.14
COL4A5-205ENST00000483338 DNALI1O14645 258 aaPredicted RBP7.95□□□□□ -1.14
COL4A5-205ENST00000483338 ACOT8O14734 319 aa7.95□□□□□ -1.14
COL4A5-205ENST00000483338 DCXO43602 365 aa7.95□□□□□ -1.14
COL4A5-205ENST00000483338 HLA-DRAP01903 254 aa7.95□□□□□ -1.14
COL4A5-205ENST00000483338 GLRA2P23416 452 aa7.95□□□□□ -1.14
COL4A5-205ENST00000483338 TALDO1P37837 337 aa7.95□□□□□ -1.14
COL4A5-205ENST00000483338 GPC5P78333 572 aa7.95□□□□□ -1.14
COL4A5-205ENST00000483338 DBPQ10586 325 aaPredicted RBP7.95□□□□□ -1.14
COL4A5-205ENST00000483338 BST2Q10589 180 aaKnown RBP7.95□□□□□ -1.14
COL4A5-205ENST00000483338 CCDC103Q8IW40 242 aa7.95□□□□□ -1.14
COL4A5-205ENST00000483338 CARNMT1Q8N4J0 409 aa7.95□□□□□ -1.14
COL4A5-205ENST00000483338 IL17RDQ8NFM7 739 aa7.95□□□□□ -1.14
COL4A5-205ENST00000483338 OR7D4Q8NG98 312 aa7.95□□□□□ -1.14
COL4A5-205ENST00000483338 PSMA8Q8TAA3 256 aa7.95□□□□□ -1.14
COL4A5-205ENST00000483338 SLC2A14Q8TDB8 520 aa7.95□□□□□ -1.14
COL4A5-205ENST00000483338 SERPINI1Q99574 410 aa7.95□□□□□ -1.14
COL4A5-205ENST00000483338 LHPPQ9H008 270 aa7.95□□□□□ -1.14
COL4A5-205ENST00000483338 TRPV6Q9H1D0 765 aa7.95□□□□□ -1.14
COL4A5-205ENST00000483338 ACSS3Q9H6R3 686 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms