RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 BCKDHBP21953 392 aa16.94■□□□□ 0.3
HMGN1-214ENST00000482733 CD6P30203 668 aa16.94■□□□□ 0.3
HMGN1-214ENST00000482733 TPMTP51580 245 aa16.94■□□□□ 0.3
HMGN1-214ENST00000482733 CDH6P55285 790 aa16.94■□□□□ 0.3
HMGN1-214ENST00000482733 SERINC3Q13530 473 aa16.94■□□□□ 0.3
HMGN1-214ENST00000482733 PDK2Q15119 407 aa16.94■□□□□ 0.3
HMGN1-214ENST00000482733 LPAL2Q16609 132 aa16.94■□□□□ 0.3
HMGN1-214ENST00000482733 PMS2CLQ68D20 193 aa16.94■□□□□ 0.3
HMGN1-214ENST00000482733 RAD9BQ6WBX8 426 aa16.94■□□□□ 0.3
HMGN1-214ENST00000482733 ALYREFQ86V81 257 aaKnown RBP16.94■□□□□ 0.3
HMGN1-214ENST00000482733 STK40Q8N2I9 435 aa16.94■□□□□ 0.3
HMGN1-214ENST00000482733 PCDH20Q8N6Y1 951 aaKnown RBP16.94■□□□□ 0.3
HMGN1-214ENST00000482733 FAM71BQ8TC56 605 aa16.94■□□□□ 0.3
HMGN1-214ENST00000482733 ISG20Q96AZ6 181 aaKnown RBP16.94■□□□□ 0.3
HMGN1-214ENST00000482733 HMCESQ96FZ2 354 aa16.94■□□□□ 0.3
HMGN1-214ENST00000482733 CSPG4P5Q96PW8 444 aa16.94■□□□□ 0.3
HMGN1-214ENST00000482733 LRRC19Q9H756 370 aa16.94■□□□□ 0.3
HMGN1-214ENST00000482733 MBD1Q9UIS9 605 aaPredicted RBP16.94■□□□□ 0.3
HMGN1-214ENST00000482733 NCKAP1Q9Y2A7 1128 aa16.94■□□□□ 0.3
HMGN1-214ENST00000482733 MCF2LO15068 1137 aa16.93■□□□□ 0.3
HMGN1-214ENST00000482733 NDUFS2O75306 463 aa16.93■□□□□ 0.3
HMGN1-214ENST00000482733 ADH1BP00325 375 aa16.93■□□□□ 0.3
HMGN1-214ENST00000482733 RECQLP46063 649 aaPredicted RBP16.93■□□□□ 0.3
HMGN1-214ENST00000482733 TAS2R40P59535 323 aa16.93■□□□□ 0.3
HMGN1-214ENST00000482733 RPL6Q02878 288 aaKnown RBP16.93■□□□□ 0.3
HMGN1-214ENST00000482733 CST6Q15828 149 aa16.93■□□□□ 0.3
HMGN1-214ENST00000482733 INO80DQ53TQ3 878 aaPredicted RBP16.93■□□□□ 0.3
HMGN1-214ENST00000482733 LRRC38Q5VT99 294 aa16.93■□□□□ 0.3
HMGN1-214ENST00000482733 FAM46CQ5VWP2 391 aa16.93■□□□□ 0.3
HMGN1-214ENST00000482733 C22orf39Q6P5X5 142 aa16.93■□□□□ 0.3
HMGN1-214ENST00000482733 Q6ZVU0 165 aa16.93■□□□□ 0.3
HMGN1-214ENST00000482733 USP30Q70CQ3 517 aa16.93■□□□□ 0.3
HMGN1-214ENST00000482733 CACUL1Q86Y37 369 aa16.93■□□□□ 0.3
HMGN1-214ENST00000482733 TMEM139Q8IV31 216 aa16.93■□□□□ 0.3
HMGN1-214ENST00000482733 MMAAQ8IVH4 418 aaKnown RBP16.93■□□□□ 0.3
HMGN1-214ENST00000482733 KCTD6Q8NC69 237 aa16.93■□□□□ 0.3
HMGN1-214ENST00000482733 TSC1Q92574 1164 aa16.93■□□□□ 0.3
HMGN1-214ENST00000482733 FAM129BQ96TA1 746 aa16.93■□□□□ 0.3
HMGN1-214ENST00000482733 HINFPQ9BQA5 517 aa16.93■□□□□ 0.3
HMGN1-214ENST00000482733 PABPC3Q9H361 631 aaKnown RBP16.93■□□□□ 0.3
HMGN1-214ENST00000482733 GRPEL1Q9HAV7 217 aa16.93■□□□□ 0.3
HMGN1-214ENST00000482733 WSB2Q9NYS7 404 aaPredicted RBP16.93■□□□□ 0.3
HMGN1-214ENST00000482733 PCDHGA5Q9Y5G8 931 aa16.93■□□□□ 0.3
HMGN1-214ENST00000482733 BTNL10A8MVZ5 291 aa16.92■□□□□ 0.3
HMGN1-214ENST00000482733 C1QTNF3-AMACRE9PGA6 284 aa16.92■□□□□ 0.3
HMGN1-214ENST00000482733 K7ERQ8 282 aa16.92■□□□□ 0.3
HMGN1-214ENST00000482733 SMAD6O43541 496 aaKnown RBP16.92■□□□□ 0.3
HMGN1-214ENST00000482733 BUB1O43683 1085 aa16.92■□□□□ 0.3
HMGN1-214ENST00000482733 LRP3O75074 770 aa16.92■□□□□ 0.3
HMGN1-214ENST00000482733 EPN2O95208 641 aa16.92■□□□□ 0.3
HMGN1-214ENST00000482733 IL1BP01584 269 aa16.92■□□□□ 0.3
HMGN1-214ENST00000482733 VAV1P15498 845 aa16.92■□□□□ 0.3
HMGN1-214ENST00000482733 C5AR1P21730 350 aa16.92■□□□□ 0.3
HMGN1-214ENST00000482733 SERPINB6P35237 376 aa16.92■□□□□ 0.3
HMGN1-214ENST00000482733 GJC1P36383 396 aa16.92■□□□□ 0.3
HMGN1-214ENST00000482733 DPP6P42658 865 aa16.92■□□□□ 0.3
HMGN1-214ENST00000482733 ARSEP51690 589 aa16.92■□□□□ 0.3
HMGN1-214ENST00000482733 ZFYVE27Q5T4F4 411 aa16.92■□□□□ 0.3
HMGN1-214ENST00000482733 AFMIDQ63HM1 303 aa16.92■□□□□ 0.3
HMGN1-214ENST00000482733 TMCO3Q6UWJ1 677 aa16.92■□□□□ 0.3
HMGN1-214ENST00000482733 PLPP6Q8IY26 295 aa16.92■□□□□ 0.3
HMGN1-214ENST00000482733 GPR161Q8N6U8 529 aaKnown RBP16.92■□□□□ 0.3
HMGN1-214ENST00000482733 FRMD1Q8N878 549 aa16.92■□□□□ 0.3
HMGN1-214ENST00000482733 TOE1Q96GM8 510 aaKnown RBP16.92■□□□□ 0.3
HMGN1-214ENST00000482733 ZNF670Q9BS34 389 aa16.92■□□□□ 0.3
HMGN1-214ENST00000482733 SLC39A8Q9C0K1 460 aa16.92■□□□□ 0.3
HMGN1-214ENST00000482733 KLC2Q9H0B6 622 aa16.92■□□□□ 0.3
HMGN1-214ENST00000482733 ZFHX2Q9C0A1 2572 aaPredicted RBP16.92■□□□□ 0.3
HMGN1-214ENST00000482733 CKAP5Q14008 2032 aa16.92■□□□□ 0.3
HMGN1-214ENST00000482733 DOCK4Q8N1I0 1966 aa16.91■□□□□ 0.3
HMGN1-214ENST00000482733 SPOPO43791 374 aa16.91■□□□□ 0.3
HMGN1-214ENST00000482733 CD160O95971 181 aa16.91■□□□□ 0.3
HMGN1-214ENST00000482733 AMPD1P23109 780 aa16.91■□□□□ 0.3
HMGN1-214ENST00000482733 HOXD11P31277 338 aaPredicted RBP16.91■□□□□ 0.3
HMGN1-214ENST00000482733 SLC8A1P32418 973 aa16.91■□□□□ 0.3
HMGN1-214ENST00000482733 PSMD8P48556 350 aa16.91■□□□□ 0.3
HMGN1-214ENST00000482733 PAPOLAP51003 745 aaKnown RBP16.91■□□□□ 0.3
HMGN1-214ENST00000482733 VAV2P52735 878 aa16.91■□□□□ 0.3
HMGN1-214ENST00000482733 KIAA1328Q86T90 577 aa16.91■□□□□ 0.3
HMGN1-214ENST00000482733 CPNE8Q86YQ8 564 aa16.91■□□□□ 0.3
HMGN1-214ENST00000482733 RHOT1Q8IXI2 618 aa16.91■□□□□ 0.3
HMGN1-214ENST00000482733 CCDC112Q8NEF3 446 aa16.91■□□□□ 0.3
HMGN1-214ENST00000482733 TMIEQ8NEW7 156 aa16.91■□□□□ 0.3
HMGN1-214ENST00000482733 CADM4Q8NFZ8 388 aa16.91■□□□□ 0.3
HMGN1-214ENST00000482733 OR2A12Q8NGT7 310 aa16.91■□□□□ 0.3
HMGN1-214ENST00000482733 GANCQ8TET4 914 aa16.91■□□□□ 0.3
HMGN1-214ENST00000482733 FOXJ1Q92949 421 aa16.91■□□□□ 0.3
HMGN1-214ENST00000482733 CELF6Q96J87 481 aaKnown RBP16.91■□□□□ 0.3
HMGN1-214ENST00000482733 CALN1Q9BXU9 219 aa16.91■□□□□ 0.3
HMGN1-214ENST00000482733 BTBD1Q9H0C5 482 aa16.91■□□□□ 0.3
HMGN1-214ENST00000482733 PCED1AQ9H1Q7 454 aa16.91■□□□□ 0.3
HMGN1-214ENST00000482733 SGK2Q9HBY8 427 aa16.91■□□□□ 0.3
HMGN1-214ENST00000482733 FBXL12Q9NXK8 326 aa16.91■□□□□ 0.3
HMGN1-214ENST00000482733 PPM1HQ9ULR3 514 aa16.91■□□□□ 0.3
HMGN1-214ENST00000482733 FZD4Q9ULV1 537 aa16.91■□□□□ 0.3
HMGN1-214ENST00000482733 REXO2Q9Y3B8 237 aaKnown RBP16.91■□□□□ 0.3
HMGN1-214ENST00000482733 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.9■□□□□ 0.3
HMGN1-214ENST00000482733 MID1O15344 667 aa16.9■□□□□ 0.3
HMGN1-214ENST00000482733 PJA2O43164 708 aa16.9■□□□□ 0.3
HMGN1-214ENST00000482733 BNIP3LO60238 219 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms