RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 ATP8B4Q8TF62 1192 aa6.97□□□□□ -1.29
CLK1-212ENST00000482590 HTRA1Q92743 480 aa6.97□□□□□ -1.29
CLK1-212ENST00000482590 MAP7D2Q96T17 732 aa6.97□□□□□ -1.29
CLK1-212ENST00000482590 ZNF577Q9BSK1 485 aa6.97□□□□□ -1.29
CLK1-212ENST00000482590 CNPPD1Q9BV87 410 aa6.97□□□□□ -1.29
CLK1-212ENST00000482590 STK33Q9BYT3 514 aa6.97□□□□□ -1.29
CLK1-212ENST00000482590 C22orf23Q9BZE7 217 aa6.97□□□□□ -1.29
CLK1-212ENST00000482590 UNKQ9C0B0 810 aaKnown RBP6.97□□□□□ -1.29
CLK1-212ENST00000482590 SMURF1Q9HCE7 757 aa6.97□□□□□ -1.29
CLK1-212ENST00000482590 PREBQ9HCU5 417 aa6.97□□□□□ -1.29
CLK1-212ENST00000482590 C6orf50Q9HD87 102 aa6.97□□□□□ -1.29
CLK1-212ENST00000482590 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.97□□□□□ -1.29
CLK1-212ENST00000482590 AURKAIP1Q9NWT8 199 aaPredicted RBP6.97□□□□□ -1.29
CLK1-212ENST00000482590 UCKL1Q9NWZ5 548 aa6.97□□□□□ -1.29
CLK1-212ENST00000482590 LRFN1Q9P244 771 aa6.97□□□□□ -1.29
CLK1-212ENST00000482590 WDR35Q9P2L0 1181 aa6.97□□□□□ -1.29
CLK1-212ENST00000482590 Q9UFV3 132 aa6.97□□□□□ -1.29
CLK1-212ENST00000482590 MUTYHQ9UIF7 546 aa6.97□□□□□ -1.29
CLK1-212ENST00000482590 BARX2Q9UMQ3 279 aaPredicted RBP6.97□□□□□ -1.29
CLK1-212ENST00000482590 SPO11Q9Y5K1 396 aa6.97□□□□□ -1.29
CLK1-212ENST00000482590 MTCL1Q9Y4B5 1905 aaKnown RBP6.97□□□□□ -1.29
CLK1-212ENST00000482590 PLXNA3P51805 1871 aa6.96□□□□□ -1.29
CLK1-212ENST00000482590 IGKV6D-21A0A0A0MT36 114 aa6.96□□□□□ -1.3
CLK1-212ENST00000482590 CCDC196A0A1B0GTZ2 297 aa6.96□□□□□ -1.3
CLK1-212ENST00000482590 IPO5O00410 1097 aaKnown RBP6.96□□□□□ -1.3
CLK1-212ENST00000482590 SYT5O00445 386 aa6.96□□□□□ -1.3
CLK1-212ENST00000482590 ACKR2O00590 384 aa6.96□□□□□ -1.3
CLK1-212ENST00000482590 CLASP2O75122 1294 aaKnown RBP6.96□□□□□ -1.3
CLK1-212ENST00000482590 ADH4P08319 380 aa6.96□□□□□ -1.3
CLK1-212ENST00000482590 SRGAP2CP0DJJ0 459 aa6.96□□□□□ -1.3
CLK1-212ENST00000482590 LAG3P18627 525 aa6.96□□□□□ -1.3
CLK1-212ENST00000482590 GNA11P29992 359 aa6.96□□□□□ -1.3
CLK1-212ENST00000482590 SERPINF1P36955 418 aa6.96□□□□□ -1.3
CLK1-212ENST00000482590 MEOX1P50221 254 aa6.96□□□□□ -1.3
CLK1-212ENST00000482590 NANOS3P60323 173 aaKnown RBP6.96□□□□□ -1.3
CLK1-212ENST00000482590 SRSF2Q01130 221 aaKnown RBP6.96□□□□□ -1.3
CLK1-212ENST00000482590 AKAP17AQ02040 695 aaKnown RBP6.96□□□□□ -1.3
CLK1-212ENST00000482590 UBE3AQ05086 875 aa6.96□□□□□ -1.3
CLK1-212ENST00000482590 ADAM15Q13444 863 aa6.96□□□□□ -1.3
CLK1-212ENST00000482590 PFKFB3Q16875 520 aaPredicted RBP6.96□□□□□ -1.3
CLK1-212ENST00000482590 ABHD15Q6UXT9 468 aa6.96□□□□□ -1.3
CLK1-212ENST00000482590 FRMD7Q6ZUT3 714 aa6.96□□□□□ -1.3
CLK1-212ENST00000482590 ZNF627Q7L945 461 aa6.96□□□□□ -1.3
CLK1-212ENST00000482590 TRMT1LQ7Z2T5 733 aaKnown RBP6.96□□□□□ -1.3
CLK1-212ENST00000482590 GALNTL5Q7Z4T8 443 aa6.96□□□□□ -1.3
CLK1-212ENST00000482590 ADGRE4PQ86SQ3 457 aa6.96□□□□□ -1.3
CLK1-212ENST00000482590 RBM23Q86U06 439 aaKnown RBP6.96□□□□□ -1.3
CLK1-212ENST00000482590 RTN4RL1Q86UN2 441 aaPredicted RBP6.96□□□□□ -1.3
CLK1-212ENST00000482590 CPOQ8IVL8 374 aa6.96□□□□□ -1.3
CLK1-212ENST00000482590 LRRC43Q8N309 656 aa6.96□□□□□ -1.3
CLK1-212ENST00000482590 FAM167AQ96KS9 214 aa6.96□□□□□ -1.3
CLK1-212ENST00000482590 SPATA17Q96L03 361 aa6.96□□□□□ -1.3
CLK1-212ENST00000482590 ADAM2Q99965 735 aa6.96□□□□□ -1.3
CLK1-212ENST00000482590 OR10A5Q9H207 317 aa6.96□□□□□ -1.3
CLK1-212ENST00000482590 KCNH6Q9H252 994 aa6.96□□□□□ -1.3
CLK1-212ENST00000482590 TLE6Q9H808 572 aa6.96□□□□□ -1.3
CLK1-212ENST00000482590 ERVK-5Q9HDB9 667 aa6.96□□□□□ -1.3
CLK1-212ENST00000482590 DCAF16Q9NXF7 216 aa6.96□□□□□ -1.3
CLK1-212ENST00000482590 MTRRQ9UBK8 725 aa6.96□□□□□ -1.3
CLK1-212ENST00000482590 TBC1D29Q9UFV1 150 aa6.96□□□□□ -1.3
CLK1-212ENST00000482590 ITGB1BP2Q9UKP3 347 aa6.96□□□□□ -1.3
CLK1-212ENST00000482590 NID2Q14112 1375 aa6.95□□□□□ -1.3
CLK1-212ENST00000482590 IGLV3-22A0A075B6J6 115 aa6.95□□□□□ -1.3
CLK1-212ENST00000482590 ESYT2A0FGR8 921 aa6.95□□□□□ -1.3
CLK1-212ENST00000482590 FAM86B1E9PN63 330 aa6.95□□□□□ -1.3
CLK1-212ENST00000482590 APOL1O14791 398 aa6.95□□□□□ -1.3
CLK1-212ENST00000482590 NPC1O15118 1278 aa6.95□□□□□ -1.3
CLK1-212ENST00000482590 DAPK3O43293 454 aa6.95□□□□□ -1.3
CLK1-212ENST00000482590 C22orf31O95567 290 aa6.95□□□□□ -1.3
CLK1-212ENST00000482590 CCNE2O96020 404 aa6.95□□□□□ -1.3
CLK1-212ENST00000482590 VTNP04004 478 aa6.95□□□□□ -1.3
CLK1-212ENST00000482590 FAM86B2P0C5J1 330 aa6.95□□□□□ -1.3
CLK1-212ENST00000482590 HARSP12081 509 aaKnown RBP6.95□□□□□ -1.3
CLK1-212ENST00000482590 MAKP20794 623 aa6.95□□□□□ -1.3
CLK1-212ENST00000482590 DNAJB1P25685 340 aa6.95□□□□□ -1.3
CLK1-212ENST00000482590 TMOD1P28289 359 aa6.95□□□□□ -1.3
CLK1-212ENST00000482590 CA8P35219 290 aa6.95□□□□□ -1.3
CLK1-212ENST00000482590 CRYBB1P53674 252 aaPredicted RBP6.95□□□□□ -1.3
CLK1-212ENST00000482590 HHEXQ03014 270 aa6.95□□□□□ -1.3
CLK1-212ENST00000482590 COASYQ13057 564 aa6.95□□□□□ -1.3
CLK1-212ENST00000482590 TRPC3Q13507 836 aa6.95□□□□□ -1.3
CLK1-212ENST00000482590 CUL4AQ13619 759 aa6.95□□□□□ -1.3
CLK1-212ENST00000482590 CAMK1Q14012 370 aa6.95□□□□□ -1.3
CLK1-212ENST00000482590 EFR3AQ14156 821 aa6.95□□□□□ -1.3
CLK1-212ENST00000482590 CRY1Q16526 586 aa6.95□□□□□ -1.3
CLK1-212ENST00000482590 ADCK5Q3MIX3 580 aa6.95□□□□□ -1.3
CLK1-212ENST00000482590 ARL13BQ3SXY8 428 aa6.95□□□□□ -1.3
CLK1-212ENST00000482590 HERC4Q5GLZ8 1057 aaPredicted RBP6.95□□□□□ -1.3
CLK1-212ENST00000482590 PLPP4Q5VZY2 271 aa6.95□□□□□ -1.3
CLK1-212ENST00000482590 PCSK4Q6UW60 755 aa6.95□□□□□ -1.3
CLK1-212ENST00000482590 SLC24A5Q71RS6 500 aa6.95□□□□□ -1.3
CLK1-212ENST00000482590 FAM228AQ86W67 206 aa6.95□□□□□ -1.3
CLK1-212ENST00000482590 LIX1LQ8IVB5 337 aa6.95□□□□□ -1.3
CLK1-212ENST00000482590 D2HGDHQ8N465 521 aa6.95□□□□□ -1.3
CLK1-212ENST00000482590 METTL13Q8N6R0 699 aa6.95□□□□□ -1.3
CLK1-212ENST00000482590 COLGALT1Q8NBJ5 622 aa6.95□□□□□ -1.3
CLK1-212ENST00000482590 SMRP1Q8NCR6 262 aa6.95□□□□□ -1.3
CLK1-212ENST00000482590 BICD2Q8TD16 824 aa6.95□□□□□ -1.3
CLK1-212ENST00000482590 MGARPQ8TDB4 240 aa6.95□□□□□ -1.3
CLK1-212ENST00000482590 N4BP2L2Q92802 583 aaPredicted RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms