RNA–Protein interactions for RNA: ENST00000481812.4

VPS16-207, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 943 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-207ENST00000481812 SP110Q9HB58 689 aa21.15■□□□□ 0.98
VPS16-207ENST00000481812 ATG2BQ96BY7 2078 aa21.14■□□□□ 0.98
VPS16-207ENST00000481812 J3KR12 359 aa21.14■□□□□ 0.97
VPS16-207ENST00000481812 MCF2LO15068 1137 aa21.14■□□□□ 0.97
VPS16-207ENST00000481812 MATN3O15232 486 aa21.14■□□□□ 0.97
VPS16-207ENST00000481812 ATP9BO43861 1147 aa21.14■□□□□ 0.97
VPS16-207ENST00000481812 MAP3K6O95382 1288 aa21.14■□□□□ 0.97
VPS16-207ENST00000481812 CD160O95971 181 aa21.14■□□□□ 0.97
VPS16-207ENST00000481812 NNMTP40261 264 aa21.14■□□□□ 0.97
VPS16-207ENST00000481812 HNRNPDQ14103 355 aaKnown RBP21.14■□□□□ 0.97
VPS16-207ENST00000481812 PRKD1Q15139 912 aaPredicted RBP21.14■□□□□ 0.97
VPS16-207ENST00000481812 CCNG2Q16589 344 aa21.14■□□□□ 0.97
VPS16-207ENST00000481812 PTPRNQ16849 979 aa21.14■□□□□ 0.97
VPS16-207ENST00000481812 ARHGAP36Q6ZRI8 547 aa21.14■□□□□ 0.97
VPS16-207ENST00000481812 TRMT11Q7Z4G4 463 aaKnown RBP21.14■□□□□ 0.97
VPS16-207ENST00000481812 CCDC13Q8IYE1 715 aa21.14■□□□□ 0.97
VPS16-207ENST00000481812 SH2D3CQ8N5H7 860 aa21.14■□□□□ 0.97
VPS16-207ENST00000481812 SLC35B2Q8TB61 432 aa21.14■□□□□ 0.97
VPS16-207ENST00000481812 TFB1MQ8WVM0 346 aaKnown RBP21.14■□□□□ 0.97
VPS16-207ENST00000481812 MAML1Q92585 1016 aa21.14■□□□□ 0.97
VPS16-207ENST00000481812 HAUS1Q96CS2 278 aa21.14■□□□□ 0.97
VPS16-207ENST00000481812 MYO19Q96H55 970 aa21.14■□□□□ 0.97
VPS16-207ENST00000481812 HCN2Q9UL51 889 aa21.14■□□□□ 0.97
VPS16-207ENST00000481812 NDRG2Q9UN36 371 aaKnown RBP21.14■□□□□ 0.97
VPS16-207ENST00000481812 FAM170BA6NMN3 283 aa21.13■□□□□ 0.97
VPS16-207ENST00000481812 MTSS1O43312 755 aa21.13■□□□□ 0.97
VPS16-207ENST00000481812 PEX11BO96011 259 aa21.13■□□□□ 0.97
VPS16-207ENST00000481812 RBP3P10745 1247 aa21.13■□□□□ 0.97
VPS16-207ENST00000481812 PAFAH1B1P43034 410 aa21.13■□□□□ 0.97
VPS16-207ENST00000481812 CTSOP43234 321 aaPredicted RBP21.13■□□□□ 0.97
VPS16-207ENST00000481812 SERPINH1P50454 418 aaKnown RBP21.13■□□□□ 0.97
VPS16-207ENST00000481812 EIF3EP60228 445 aaKnown RBP21.13■□□□□ 0.97
VPS16-207ENST00000481812 ST8SIA6P61647 398 aa21.13■□□□□ 0.97
VPS16-207ENST00000481812 FZD5Q13467 585 aa21.13■□□□□ 0.97
VPS16-207ENST00000481812 UBXN2BQ14CS0 331 aa21.13■□□□□ 0.97
VPS16-207ENST00000481812 SLC45A4Q5BKX6 768 aa21.13■□□□□ 0.97
VPS16-207ENST00000481812 ZNF513Q8N8E2 541 aaPredicted RBP21.13■□□□□ 0.97
VPS16-207ENST00000481812 CCNYQ8ND76 341 aa21.13■□□□□ 0.97
VPS16-207ENST00000481812 USP33Q8TEY7 942 aa21.13■□□□□ 0.97
VPS16-207ENST00000481812 NSMCE1Q8WV22 266 aa21.13■□□□□ 0.97
VPS16-207ENST00000481812 NKD2Q969F2 451 aaPredicted RBP21.13■□□□□ 0.97
VPS16-207ENST00000481812 ISG20Q96AZ6 181 aaKnown RBP21.13■□□□□ 0.97
VPS16-207ENST00000481812 CLDN23Q96B33 292 aa21.13■□□□□ 0.97
VPS16-207ENST00000481812 QKIQ96PU8 341 aaKnown RBP eCLIP21.13■□□□□ 0.97
VPS16-207ENST00000481812 LGMNQ99538 433 aa21.13■□□□□ 0.97
VPS16-207ENST00000481812 CEP44Q9C0F1 390 aa21.13■□□□□ 0.97
VPS16-207ENST00000481812 UBA2Q9UBT2 640 aaPredicted RBP21.13■□□□□ 0.97
VPS16-207ENST00000481812 AMACRQ9UHK6 382 aa21.13■□□□□ 0.97
VPS16-207ENST00000481812 SLC8A2Q9UPR5 921 aa21.13■□□□□ 0.97
VPS16-207ENST00000481812 R3HDM2Q9Y2K5 976 aaKnown RBP21.13■□□□□ 0.97
VPS16-207ENST00000481812 BCLAF3A2AJT9 711 aaKnown RBP21.12■□□□□ 0.97
VPS16-207ENST00000481812 SRCP12931 536 aa21.12■□□□□ 0.97
VPS16-207ENST00000481812 RPS9P46781 194 aaKnown RBP21.12■□□□□ 0.97
VPS16-207ENST00000481812 ZNF234Q14588 700 aa21.12■□□□□ 0.97
VPS16-207ENST00000481812 CYP1B1Q16678 543 aa21.12■□□□□ 0.97
VPS16-207ENST00000481812 EGFLAMQ63HQ2 1017 aa21.12■□□□□ 0.97
VPS16-207ENST00000481812 ADAT2Q7Z6V5 191 aaKnown RBP21.12■□□□□ 0.97
VPS16-207ENST00000481812 CDKL3Q8IVW4 592 aaPredicted RBP21.12■□□□□ 0.97
VPS16-207ENST00000481812 TEX26Q8N6G2 289 aa21.12■□□□□ 0.97
VPS16-207ENST00000481812 PJA1Q8NG27 643 aa21.12■□□□□ 0.97
VPS16-207ENST00000481812 CYB5D2Q8WUJ1 264 aa21.12■□□□□ 0.97
VPS16-207ENST00000481812 SORCS1Q8WY21 1168 aa21.12■□□□□ 0.97
VPS16-207ENST00000481812 ZNF592Q92610 1267 aa21.12■□□□□ 0.97
VPS16-207ENST00000481812 RPL10LQ96L21 214 aaKnown RBP21.12■□□□□ 0.97
VPS16-207ENST00000481812 FERMT1Q9BQL6 677 aa21.12■□□□□ 0.97
VPS16-207ENST00000481812 TMEM245Q9H330 911 aa21.12■□□□□ 0.97
VPS16-207ENST00000481812 LMAN1LQ9HAT1 526 aa21.12■□□□□ 0.97
VPS16-207ENST00000481812 CDC23Q9UJX2 597 aa21.12■□□□□ 0.97
VPS16-207ENST00000481812 DRG1Q9Y295 367 aaKnown RBP21.12■□□□□ 0.97
VPS16-207ENST00000481812 CKAP5Q14008 2032 aa21.11■□□□□ 0.97
VPS16-207ENST00000481812 CFAP69A5D8W1 941 aa21.11■□□□□ 0.97
VPS16-207ENST00000481812 CHURC1-FNTBB4DL54 471 aa21.11■□□□□ 0.97
VPS16-207ENST00000481812 H7C0C1 242 aa21.11■□□□□ 0.97
VPS16-207ENST00000481812 LIASO43766 372 aa21.11■□□□□ 0.97
VPS16-207ENST00000481812 SLC34A2O95436 690 aa21.11■□□□□ 0.97
VPS16-207ENST00000481812 MT-CO1P00395 513 aa21.11■□□□□ 0.97
VPS16-207ENST00000481812 NTSR1P30989 418 aa21.11■□□□□ 0.97
VPS16-207ENST00000481812 MAGEA9P43362 315 aa21.11■□□□□ 0.97
VPS16-207ENST00000481812 ATP5OP48047 213 aa21.11■□□□□ 0.97
VPS16-207ENST00000481812 RENBPP51606 427 aa21.11■□□□□ 0.97
VPS16-207ENST00000481812 IFI35P80217 286 aaPredicted RBP21.11■□□□□ 0.97
VPS16-207ENST00000481812 AP1B1Q10567 949 aa21.11■□□□□ 0.97
VPS16-207ENST00000481812 EMC10Q5UCC4 262 aa21.11■□□□□ 0.97
VPS16-207ENST00000481812 ZC3H18Q86VM9 953 aaKnown RBP21.11■□□□□ 0.97
VPS16-207ENST00000481812 PLPP6Q8IY26 295 aa21.11■□□□□ 0.97
VPS16-207ENST00000481812 CCDC33Q8N5R6 958 aa21.11■□□□□ 0.97
VPS16-207ENST00000481812 C12orf50Q8NA57 414 aaPredicted RBP21.11■□□□□ 0.97
VPS16-207ENST00000481812 ATP11CQ8NB49 1132 aa21.11■□□□□ 0.97
VPS16-207ENST00000481812 IER2Q9BTL4 223 aa21.11■□□□□ 0.97
VPS16-207ENST00000481812 FOXQ1Q9C009 403 aa21.11■□□□□ 0.97
VPS16-207ENST00000481812 SUN2Q9UH99 717 aa21.11■□□□□ 0.97
VPS16-207ENST00000481812 SLCO3A1Q9UIG8 710 aa21.11■□□□□ 0.97
VPS16-207ENST00000481812 MTF2Q9Y483 593 aaPredicted RBP21.11■□□□□ 0.97
VPS16-207ENST00000481812 A0A0C4DFX4 3053 aa21.1■□□□□ 0.97
VPS16-207ENST00000481812 GOLGA6L10A0A0M3HER8 536 aa21.1■□□□□ 0.97
VPS16-207ENST00000481812 RNF40O75150 1001 aa21.1■□□□□ 0.97
VPS16-207ENST00000481812 URI1O94763 535 aaPredicted RBP21.1■□□□□ 0.97
VPS16-207ENST00000481812 CCNB1P14635 433 aa21.1■□□□□ 0.97
VPS16-207ENST00000481812 TIE1P35590 1138 aa21.1■□□□□ 0.97
VPS16-207ENST00000481812 HSPA9P38646 679 aaKnown RBP21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms