RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 ENTPD7Q9NQZ7 604 aa16.08■□□□□ 0.16
RXRA-202ENST00000481739 SMYD2Q9NRG4 433 aa16.08■□□□□ 0.16
RXRA-202ENST00000481739 SYBUQ9NX95 663 aa16.08■□□□□ 0.16
RXRA-202ENST00000481739 IGLV3-10A0A075B6K4 115 aa16.07■□□□□ 0.16
RXRA-202ENST00000481739 SLC38A8A6NNN8 435 aa16.07■□□□□ 0.16
RXRA-202ENST00000481739 PRRG1O14668 218 aa16.07■□□□□ 0.16
RXRA-202ENST00000481739 MAFKO60675 156 aa16.07■□□□□ 0.16
RXRA-202ENST00000481739 EDF1O60869 148 aaKnown RBP16.07■□□□□ 0.16
RXRA-202ENST00000481739 ZDHHC11BP0C7U3 371 aa16.07■□□□□ 0.16
RXRA-202ENST00000481739 ETV4P43268 484 aa16.07■□□□□ 0.16
RXRA-202ENST00000481739 PGFP49763 221 aa16.07■□□□□ 0.16
RXRA-202ENST00000481739 ZKSCAN8Q15776 578 aaPredicted RBP16.07■□□□□ 0.16
RXRA-202ENST00000481739 STXBP5Q5T5C0 1151 aa16.07■□□□□ 0.16
RXRA-202ENST00000481739 RNF43Q68DV7 783 aa16.07■□□□□ 0.16
RXRA-202ENST00000481739 FAM109BQ6ICB4 259 aaPredicted RBP16.07■□□□□ 0.16
RXRA-202ENST00000481739 PDZD8Q8NEN9 1154 aa16.07■□□□□ 0.16
RXRA-202ENST00000481739 OVCA2Q8WZ82 227 aa16.07■□□□□ 0.16
RXRA-202ENST00000481739 ZNF75CPQ92670 426 aaPredicted RBP16.07■□□□□ 0.16
RXRA-202ENST00000481739 CERS2Q96G23 380 aa16.07■□□□□ 0.16
RXRA-202ENST00000481739 TTLL2Q9BWV7 592 aa16.07■□□□□ 0.16
RXRA-202ENST00000481739 ZYG11BQ9C0D3 744 aa16.07■□□□□ 0.16
RXRA-202ENST00000481739 TXNDC16Q9P2K2 825 aa16.07■□□□□ 0.16
RXRA-202ENST00000481739 PRKAG3Q9UGI9 489 aa16.07■□□□□ 0.16
RXRA-202ENST00000481739 RPS6KL1Q9Y6S9 549 aa16.07■□□□□ 0.16
RXRA-202ENST00000481739 MOCS2O96007 188 aaPredicted RBP16.06■□□□□ 0.16
RXRA-202ENST00000481739 IL1BP01584 269 aa16.06■□□□□ 0.16
RXRA-202ENST00000481739 IGLV3-27P01718 113 aa16.06■□□□□ 0.16
RXRA-202ENST00000481739 ATF6P18850 670 aa16.06■□□□□ 0.16
RXRA-202ENST00000481739 ADRA1DP25100 572 aa16.06■□□□□ 0.16
RXRA-202ENST00000481739 ALDH1A3P47895 512 aa16.06■□□□□ 0.16
RXRA-202ENST00000481739 GEMP55040 296 aa16.06■□□□□ 0.16
RXRA-202ENST00000481739 TAF10Q12962 218 aa16.06■□□□□ 0.16
RXRA-202ENST00000481739 TAF12Q16514 161 aa16.06■□□□□ 0.16
RXRA-202ENST00000481739 ARTNQ5T4W7 220 aa16.06■□□□□ 0.16
RXRA-202ENST00000481739 FYB2Q5VWT5 728 aa16.06■□□□□ 0.16
RXRA-202ENST00000481739 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.06■□□□□ 0.16
RXRA-202ENST00000481739 OR52K1Q8NGK4 314 aa16.06■□□□□ 0.16
RXRA-202ENST00000481739 ZNF398Q8TD17 642 aa16.06■□□□□ 0.16
RXRA-202ENST00000481739 SRPK1Q96SB4 655 aaKnown RBP16.06■□□□□ 0.16
RXRA-202ENST00000481739 CPNE1Q99829 537 aa16.06■□□□□ 0.16
RXRA-202ENST00000481739 TCF25Q9BQ70 676 aa16.06■□□□□ 0.16
RXRA-202ENST00000481739 MLPHQ9BV36 600 aaPredicted RBP16.06■□□□□ 0.16
RXRA-202ENST00000481739 UBE2OQ9C0C9 1292 aaKnown RBP16.06■□□□□ 0.16
RXRA-202ENST00000481739 RXFP1Q9HBX9 757 aa16.06■□□□□ 0.16
RXRA-202ENST00000481739 HAUS2Q9NVX0 235 aa16.06■□□□□ 0.16
RXRA-202ENST00000481739 TMEM248Q9NWD8 314 aa16.06■□□□□ 0.16
RXRA-202ENST00000481739 MARCH2Q9P0N8 246 aa16.06■□□□□ 0.16
RXRA-202ENST00000481739 ZFATQ9P243 1243 aa16.06■□□□□ 0.16
RXRA-202ENST00000481739 PHTF1Q9UMS5 762 aa16.06■□□□□ 0.16
RXRA-202ENST00000481739 ZNF638Q14966 1978 aaKnown RBP16.06■□□□□ 0.16
RXRA-202ENST00000481739 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.05■□□□□ 0.16
RXRA-202ENST00000481739 F5H423 210 aaPredicted RBP16.05■□□□□ 0.16
RXRA-202ENST00000481739 GOLGA8RI6L899 631 aa16.05■□□□□ 0.16
RXRA-202ENST00000481739 KLF11O14901 512 aa16.05■□□□□ 0.16
RXRA-202ENST00000481739 LILRB3O75022 631 aa16.05■□□□□ 0.16
RXRA-202ENST00000481739 RFPL1O75677 317 aa16.05■□□□□ 0.16
RXRA-202ENST00000481739 CNPP09543 421 aaKnown RBP16.05■□□□□ 0.16
RXRA-202ENST00000481739 SPATA31D3P0C874 917 aa16.05■□□□□ 0.16
RXRA-202ENST00000481739 CRHR1P34998 444 aa16.05■□□□□ 0.16
RXRA-202ENST00000481739 GP5P40197 560 aa16.05■□□□□ 0.16
RXRA-202ENST00000481739 ERVFC1P60507 584 aa16.05■□□□□ 0.16
RXRA-202ENST00000481739 EFEMP1Q12805 493 aa16.05■□□□□ 0.16
RXRA-202ENST00000481739 PIK3R6Q5UE93 754 aa16.05■□□□□ 0.16
RXRA-202ENST00000481739 PLPP4Q5VZY2 271 aa16.05■□□□□ 0.16
RXRA-202ENST00000481739 SPATA31D4Q6ZUB0 917 aa16.05■□□□□ 0.16
RXRA-202ENST00000481739 GPR65Q8IYL9 337 aa16.05■□□□□ 0.16
RXRA-202ENST00000481739 RAB3IL1Q8TBN0 382 aa16.05■□□□□ 0.16
RXRA-202ENST00000481739 MICAL1Q8TDZ2 1067 aa16.05■□□□□ 0.16
RXRA-202ENST00000481739 PTCD2Q8WV60 388 aaKnown RBP16.05■□□□□ 0.16
RXRA-202ENST00000481739 ATP2A3Q93084 1043 aa16.05■□□□□ 0.16
RXRA-202ENST00000481739 SLC39A8Q9C0K1 460 aa16.05■□□□□ 0.16
RXRA-202ENST00000481739 GLOD4Q9HC38 313 aa16.05■□□□□ 0.16
RXRA-202ENST00000481739 NSMCE4AQ9NXX6 385 aa16.05■□□□□ 0.16
RXRA-202ENST00000481739 NUDT5Q9UKK9 219 aa16.05■□□□□ 0.16
RXRA-202ENST00000481739 GRID1Q9ULK0 1009 aa16.05■□□□□ 0.16
RXRA-202ENST00000481739 PLLPQ9Y342 182 aa16.05■□□□□ 0.16
RXRA-202ENST00000481739 HBS1LQ9Y450 684 aaKnown RBP16.05■□□□□ 0.16
RXRA-202ENST00000481739 MYO18AQ92614 2054 aaKnown RBP16.05■□□□□ 0.16
RXRA-202ENST00000481739 NEBLO76041 1014 aa16.05■□□□□ 0.16
RXRA-202ENST00000481739 CA3P07451 260 aa16.05■□□□□ 0.16
RXRA-202ENST00000481739 ACTN3Q08043 901 aaPredicted RBP16.05■□□□□ 0.16
RXRA-202ENST00000481739 CCDC15Q0P6D6 951 aa16.05■□□□□ 0.16
RXRA-202ENST00000481739 HNRNPDQ14103 355 aaKnown RBP16.05■□□□□ 0.16
RXRA-202ENST00000481739 MS4A13Q5J8X5 152 aa16.05■□□□□ 0.16
RXRA-202ENST00000481739 C10orf120Q5SQS8 335 aa16.05■□□□□ 0.16
RXRA-202ENST00000481739 FAM182AQ5T1J6 154 aa16.05■□□□□ 0.16
RXRA-202ENST00000481739 GRTP1Q5TC63 336 aa16.05■□□□□ 0.16
RXRA-202ENST00000481739 PACS1Q6VY07 963 aa16.05■□□□□ 0.16
RXRA-202ENST00000481739 SPRED2Q7Z698 418 aa16.05■□□□□ 0.16
RXRA-202ENST00000481739 ZNF683Q8IZ20 524 aa16.05■□□□□ 0.16
RXRA-202ENST00000481739 CNTD1Q8N815 330 aa16.05■□□□□ 0.16
RXRA-202ENST00000481739 POF1BQ8WVV4 589 aa16.05■□□□□ 0.16
RXRA-202ENST00000481739 KLF6Q99612 283 aaPredicted RBP16.05■□□□□ 0.16
RXRA-202ENST00000481739 MANSC1Q9H8J5 431 aa16.05■□□□□ 0.16
RXRA-202ENST00000481739 SLC17A7Q9P2U7 560 aa16.05■□□□□ 0.16
RXRA-202ENST00000481739 SOX13Q9UN79 622 aa16.05■□□□□ 0.16
RXRA-202ENST00000481739 LZTS1Q9Y250 596 aa16.05■□□□□ 0.16
RXRA-202ENST00000481739 YIPF1Q9Y548 306 aa16.05■□□□□ 0.16
RXRA-202ENST00000481739 GREB1Q4ZG55 1949 aa16.05■□□□□ 0.16
RXRA-202ENST00000481739 GBF1Q92538 1859 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms