RNA–Protein interactions for RNA: ENST00000481673.5

CHKB-209, Transcript of choline kinase beta, humanhuman

TSL 1 (best)

Gene CHKB, Length 1,856 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-209ENST00000481673 USP33Q8TEY7 942 aa20.22■□□□□ 0.83
CHKB-209ENST00000481673 ZNF669Q96BR6 464 aaPredicted RBP20.22■□□□□ 0.83
CHKB-209ENST00000481673 CCSER2Q9H7U1 834 aa20.22■□□□□ 0.83
CHKB-209ENST00000481673 MRM3Q9HC36 420 aaKnown RBP20.22■□□□□ 0.83
CHKB-209ENST00000481673 PIH1D1Q9NWS0 290 aaKnown RBP20.22■□□□□ 0.83
CHKB-209ENST00000481673 TRPM5Q9NZQ8 1165 aa20.22■□□□□ 0.83
CHKB-209ENST00000481673 SLC17A7Q9P2U7 560 aa20.22■□□□□ 0.83
CHKB-209ENST00000481673 MYO16Q9Y6X6 1858 aa20.22■□□□□ 0.83
CHKB-209ENST00000481673 MYO18AQ92614 2054 aaKnown RBP20.21■□□□□ 0.83
CHKB-209ENST00000481673 HMX2A2RU54 273 aa20.21■□□□□ 0.83
CHKB-209ENST00000481673 F5H5T6 163 aa20.21■□□□□ 0.83
CHKB-209ENST00000481673 ADAM12O43184 909 aa20.21■□□□□ 0.83
CHKB-209ENST00000481673 UGT1A9O60656 530 aa20.21■□□□□ 0.83
CHKB-209ENST00000481673 MAGEA9P43362 315 aa20.21■□□□□ 0.83
CHKB-209ENST00000481673 IL10RBQ08334 325 aa20.21■□□□□ 0.83
CHKB-209ENST00000481673 INSCQ1MX18 579 aa20.21■□□□□ 0.83
CHKB-209ENST00000481673 FYB2Q5VWT5 728 aa20.21■□□□□ 0.83
CHKB-209ENST00000481673 NDUFAF2Q8N183 169 aa20.21■□□□□ 0.83
CHKB-209ENST00000481673 TEX26Q8N6G2 289 aa20.21■□□□□ 0.83
CHKB-209ENST00000481673 ZNF398Q8TD17 642 aa20.21■□□□□ 0.83
CHKB-209ENST00000481673 PLD4Q96BZ4 506 aa20.21■□□□□ 0.83
CHKB-209ENST00000481673 FAM111AQ96PZ2 611 aa20.21■□□□□ 0.83
CHKB-209ENST00000481673 VN1R3Q9BXE9 311 aa20.21■□□□□ 0.83
CHKB-209ENST00000481673 FSD1LQ9BXM9 530 aa20.21■□□□□ 0.83
CHKB-209ENST00000481673 NACA2Q9H009 215 aa20.21■□□□□ 0.83
CHKB-209ENST00000481673 UGT1A7Q9HAW7 530 aa20.21■□□□□ 0.83
CHKB-209ENST00000481673 UGT1A10Q9HAW8 530 aa20.21■□□□□ 0.83
CHKB-209ENST00000481673 UGT1A8Q9HAW9 530 aa20.21■□□□□ 0.83
CHKB-209ENST00000481673 SP110Q9HB58 689 aa20.21■□□□□ 0.83
CHKB-209ENST00000481673 WBP1LQ9NX94 342 aa20.21■□□□□ 0.83
CHKB-209ENST00000481673 SPG21Q9NZD8 308 aa20.21■□□□□ 0.83
CHKB-209ENST00000481673 DCDC2Q9UHG0 476 aa20.21■□□□□ 0.83
CHKB-209ENST00000481673 BRCA2P51587 3418 aa20.2■□□□□ 0.82
CHKB-209ENST00000481673 ZNF840PA6NDX5 716 aa20.2■□□□□ 0.82
CHKB-209ENST00000481673 TIMP1P01033 207 aa20.2■□□□□ 0.82
CHKB-209ENST00000481673 GSTA1P08263 222 aa20.2■□□□□ 0.82
CHKB-209ENST00000481673 TACR2P21452 398 aa20.2■□□□□ 0.82
CHKB-209ENST00000481673 ALDH3A1P30838 453 aa20.2■□□□□ 0.82
CHKB-209ENST00000481673 CSE1LP55060 971 aaKnown RBP20.2■□□□□ 0.82
CHKB-209ENST00000481673 CREMQ03060 361 aa20.2■□□□□ 0.82
CHKB-209ENST00000481673 RAB33AQ14088 237 aa20.2■□□□□ 0.82
CHKB-209ENST00000481673 POLD3Q15054 466 aaPredicted RBP20.2■□□□□ 0.82
CHKB-209ENST00000481673 TAF12Q16514 161 aa20.2■□□□□ 0.82
CHKB-209ENST00000481673 CERCAMQ5T4B2 595 aa20.2■□□□□ 0.82
CHKB-209ENST00000481673 PDPK2PQ6A1A2 396 aa20.2■□□□□ 0.82
CHKB-209ENST00000481673 DDX53Q86TM3 631 aaKnown RBP20.2■□□□□ 0.82
CHKB-209ENST00000481673 PPM1EQ8WY54 764 aa20.2■□□□□ 0.82
CHKB-209ENST00000481673 FCRL3Q96P31 734 aaPredicted RBP20.2■□□□□ 0.82
CHKB-209ENST00000481673 ARNT2Q9HBZ2 717 aa20.2■□□□□ 0.82
CHKB-209ENST00000481673 UXTQ9UBK9 157 aaPredicted RBP20.2■□□□□ 0.82
CHKB-209ENST00000481673 BIRC5O15392 142 aa20.2■□□□□ 0.82
CHKB-209ENST00000481673 ATP9BO43861 1147 aa20.2■□□□□ 0.82
CHKB-209ENST00000481673 ACSL4O60488 711 aa20.2■□□□□ 0.82
CHKB-209ENST00000481673 FSBPO95073 299 aa20.2■□□□□ 0.82
CHKB-209ENST00000481673 PEX11BO96011 259 aa20.2■□□□□ 0.82
CHKB-209ENST00000481673 HLA-DQB2P05538 268 aa20.2■□□□□ 0.82
CHKB-209ENST00000481673 ITGA2BP08514 1039 aa20.2■□□□□ 0.82
CHKB-209ENST00000481673 ADRA1AP35348 466 aa20.2■□□□□ 0.82
CHKB-209ENST00000481673 PPM1AP35813 382 aa20.2■□□□□ 0.82
CHKB-209ENST00000481673 GJA8P48165 433 aa20.2■□□□□ 0.82
CHKB-209ENST00000481673 PDE1BQ01064 536 aa20.2■□□□□ 0.82
CHKB-209ENST00000481673 ALFQ53S48 1182 aa20.2■□□□□ 0.82
CHKB-209ENST00000481673 RANBP10Q6VN20 620 aa20.2■□□□□ 0.82
CHKB-209ENST00000481673 TFAP2DQ7Z6R9 452 aa20.2■□□□□ 0.82
CHKB-209ENST00000481673 IGSF8Q969P0 613 aa20.2■□□□□ 0.82
CHKB-209ENST00000481673 VWCEQ96DN2 955 aa20.2■□□□□ 0.82
CHKB-209ENST00000481673 HMCESQ96FZ2 354 aa20.2■□□□□ 0.82
CHKB-209ENST00000481673 ZNF599Q96NL3 588 aa20.2■□□□□ 0.82
CHKB-209ENST00000481673 PRKD2Q9BZL6 878 aa20.2■□□□□ 0.82
CHKB-209ENST00000481673 C11orf49Q9H6J7 331 aa20.2■□□□□ 0.82
CHKB-209ENST00000481673 RC3H2Q9HBD1 1191 aaKnown RBP20.2■□□□□ 0.82
CHKB-209ENST00000481673 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.2■□□□□ 0.82
CHKB-209ENST00000481673 UBP1Q9NZI7 540 aa20.2■□□□□ 0.82
CHKB-209ENST00000481673 ZNF212Q9UDV6 495 aa20.2■□□□□ 0.82
CHKB-209ENST00000481673 TIMM44O43615 452 aa20.19■□□□□ 0.82
CHKB-209ENST00000481673 CNTN5O94779 1100 aa20.19■□□□□ 0.82
CHKB-209ENST00000481673 BAIAP3O94812 1187 aa20.19■□□□□ 0.82
CHKB-209ENST00000481673 URODP06132 367 aa20.19■□□□□ 0.82
CHKB-209ENST00000481673 TROVE2P10155 538 aaKnown RBP eCLIP20.19■□□□□ 0.82
CHKB-209ENST00000481673 ERVK-10P10266 1014 aa20.19■□□□□ 0.82
CHKB-209ENST00000481673 NEFHP12036 1026 aa20.19■□□□□ 0.82
CHKB-209ENST00000481673 OR1E1P30953 314 aa20.19■□□□□ 0.82
CHKB-209ENST00000481673 SERPINB4P48594 390 aa20.19■□□□□ 0.82
CHKB-209ENST00000481673 BMPR2Q13873 1038 aa20.19■□□□□ 0.82
CHKB-209ENST00000481673 BTG3Q14201 252 aaPredicted RBP20.19■□□□□ 0.82
CHKB-209ENST00000481673 RABGAP1LQ5R372 815 aa20.19■□□□□ 0.82
CHKB-209ENST00000481673 PKN3Q6P5Z2 889 aa20.19■□□□□ 0.82
CHKB-209ENST00000481673 FAM47EQ6ZV65 393 aa20.19■□□□□ 0.82
CHKB-209ENST00000481673 CCDC63Q8NA47 563 aa20.19■□□□□ 0.82
CHKB-209ENST00000481673 PPHLN1Q8NEY8 458 aaKnown RBP20.19■□□□□ 0.82
CHKB-209ENST00000481673 SPATA22Q8NHS9 363 aa20.19■□□□□ 0.82
CHKB-209ENST00000481673 GABPB2Q8TAK5 448 aaPredicted RBP20.19■□□□□ 0.82
CHKB-209ENST00000481673 ISL2Q96A47 359 aa20.19■□□□□ 0.82
CHKB-209ENST00000481673 IMP4Q96G21 291 aaKnown RBP20.19■□□□□ 0.82
CHKB-209ENST00000481673 MICAL3Q7RTP6 2002 aa20.19■□□□□ 0.82
CHKB-209ENST00000481673 ZNF638Q14966 1978 aaKnown RBP20.18■□□□□ 0.82
CHKB-209ENST00000481673 SCN5AQ14524 2016 aa20.18■□□□□ 0.82
CHKB-209ENST00000481673 GLRA3O75311 464 aa20.18■□□□□ 0.82
CHKB-209ENST00000481673 TGDSO95455 350 aa20.18■□□□□ 0.82
CHKB-209ENST00000481673 HMBSP08397 361 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms