RNA–Protein interactions for RNA: ENST00000481441.1

RXRB-203, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 1,330 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-203ENST00000481441 Q6ZSR6 202 aa17.8■□□□□ 0.44
RXRB-203ENST00000481441 CLEC14AQ86T13 490 aa17.8■□□□□ 0.44
RXRB-203ENST00000481441 SMYD4Q8IYR2 804 aaPredicted RBP17.8■□□□□ 0.44
RXRB-203ENST00000481441 SH2D3CQ8N5H7 860 aa17.8■□□□□ 0.44
RXRB-203ENST00000481441 EXD3Q8N9H8 876 aa17.8■□□□□ 0.44
RXRB-203ENST00000481441 SLC35C1Q96A29 364 aa17.8■□□□□ 0.44
RXRB-203ENST00000481441 ARRDC3Q96B67 414 aa17.8■□□□□ 0.44
RXRB-203ENST00000481441 IL17BQ9UHF5 180 aa17.8■□□□□ 0.44
RXRB-203ENST00000481441 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.79■□□□□ 0.44
RXRB-203ENST00000481441 FAM237AA0A1B0GTK4 181 aa17.79■□□□□ 0.44
RXRB-203ENST00000481441 A6NNZ2 444 aa17.79■□□□□ 0.44
RXRB-203ENST00000481441 SLC16A3O15427 465 aaKnown RBP17.79■□□□□ 0.44
RXRB-203ENST00000481441 BNIP3LO60238 219 aa17.79■□□□□ 0.44
RXRB-203ENST00000481441 GPD2P43304 727 aa17.79■□□□□ 0.44
RXRB-203ENST00000481441 SYKP43405 635 aa17.79■□□□□ 0.44
RXRB-203ENST00000481441 ZNF177Q13360 481 aaPredicted RBP17.79■□□□□ 0.44
RXRB-203ENST00000481441 FZD2Q14332 565 aa17.79■□□□□ 0.44
RXRB-203ENST00000481441 RABGAP1LQ5R372 815 aa17.79■□□□□ 0.44
RXRB-203ENST00000481441 FBXL22Q6P050 247 aa17.79■□□□□ 0.44
RXRB-203ENST00000481441 GUSBP11Q6P575 273 aa17.79■□□□□ 0.44
RXRB-203ENST00000481441 EFL1Q7Z2Z2 1120 aaKnown RBP17.79■□□□□ 0.44
RXRB-203ENST00000481441 DCP2Q8IU60 420 aaKnown RBP17.79■□□□□ 0.44
RXRB-203ENST00000481441 ATP6V0D2Q8N8Y2 350 aa17.79■□□□□ 0.44
RXRB-203ENST00000481441 ZNF548Q8NEK5 533 aaPredicted RBP17.79■□□□□ 0.44
RXRB-203ENST00000481441 FAM174AQ8TBP5 190 aa17.79■□□□□ 0.44
RXRB-203ENST00000481441 KAT5Q92993 513 aa17.79■□□□□ 0.44
RXRB-203ENST00000481441 BMFQ96LC9 184 aa17.79■□□□□ 0.44
RXRB-203ENST00000481441 PPP1R9BQ96SB3 815 aa17.79■□□□□ 0.44
RXRB-203ENST00000481441 TRIM62Q9BVG3 475 aa17.79■□□□□ 0.44
RXRB-203ENST00000481441 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.79■□□□□ 0.44
RXRB-203ENST00000481441 CPED1A4D0V7 1026 aa17.78■□□□□ 0.44
RXRB-203ENST00000481441 EME2A4GXA9 379 aaPredicted RBP17.78■□□□□ 0.44
RXRB-203ENST00000481441 RNF103O00237 685 aa17.78■□□□□ 0.44
RXRB-203ENST00000481441 KPNA3O00505 521 aaPredicted RBP17.78■□□□□ 0.44
RXRB-203ENST00000481441 CSF2P04141 144 aa17.78■□□□□ 0.44
RXRB-203ENST00000481441 NME1P15531 152 aaKnown RBP17.78■□□□□ 0.44
RXRB-203ENST00000481441 CHRNA3P32297 505 aa17.78■□□□□ 0.44
RXRB-203ENST00000481441 MLLT3P42568 568 aaPredicted RBP17.78■□□□□ 0.44
RXRB-203ENST00000481441 IRAK1P51617 712 aa17.78■□□□□ 0.44
RXRB-203ENST00000481441 NDUFA8P51970 172 aa17.78■□□□□ 0.44
RXRB-203ENST00000481441 CENPCQ03188 943 aa17.78■□□□□ 0.44
RXRB-203ENST00000481441 CCDC15Q0P6D6 951 aa17.78■□□□□ 0.44
RXRB-203ENST00000481441 NFATC3Q12968 1075 aa17.78■□□□□ 0.44
RXRB-203ENST00000481441 TMEM259Q4ZIN3 620 aa17.78■□□□□ 0.44
RXRB-203ENST00000481441 SEL1L3Q68CR1 1132 aa17.78■□□□□ 0.44
RXRB-203ENST00000481441 OR6B2Q6IFH4 312 aa17.78■□□□□ 0.44
RXRB-203ENST00000481441 RBM44Q6ZP01 1051 aaKnown RBP17.78■□□□□ 0.44
RXRB-203ENST00000481441 TMIEQ8NEW7 156 aa17.78■□□□□ 0.44
RXRB-203ENST00000481441 TRIM4Q9C037 500 aa17.78■□□□□ 0.44
RXRB-203ENST00000481441 ST7Q9NRC1 585 aa17.78■□□□□ 0.44
RXRB-203ENST00000481441 NCKIPSDQ9NZQ3 722 aa17.78■□□□□ 0.44
RXRB-203ENST00000481441 HS3ST2Q9Y278 367 aa17.78■□□□□ 0.44
RXRB-203ENST00000481441 HS3ST3A1Q9Y663 406 aa17.78■□□□□ 0.44
RXRB-203ENST00000481441 CSNK1G3Q9Y6M4 447 aa17.78■□□□□ 0.44
RXRB-203ENST00000481441 UBR5O95071 2799 aaPredicted RBP17.78■□□□□ 0.44
RXRB-203ENST00000481441 AHCTF1Q8WYP5 2266 aa17.78■□□□□ 0.44
RXRB-203ENST00000481441 RIOK3O14730 519 aaKnown RBP17.77■□□□□ 0.44
RXRB-203ENST00000481441 TERTO14746 1132 aaKnown RBP17.77■□□□□ 0.44
RXRB-203ENST00000481441 EFSO43281 561 aa17.77■□□□□ 0.44
RXRB-203ENST00000481441 TCEA3O75764 348 aa17.77■□□□□ 0.44
RXRB-203ENST00000481441 PCDH8O95206 1070 aa17.77■□□□□ 0.44
RXRB-203ENST00000481441 SRCP12931 536 aa17.77■□□□□ 0.44
RXRB-203ENST00000481441 ACADSBP45954 432 aa17.77■□□□□ 0.44
RXRB-203ENST00000481441 YWHAZP63104 245 aaKnown RBP17.77■□□□□ 0.44
RXRB-203ENST00000481441 PKP1Q13835 747 aa17.77■□□□□ 0.44
RXRB-203ENST00000481441 ZSCAN23Q3MJ62 389 aa17.77■□□□□ 0.44
RXRB-203ENST00000481441 KYAT3Q6YP21 454 aaKnown RBP17.77■□□□□ 0.44
RXRB-203ENST00000481441 PTAR1Q7Z6K3 402 aaPredicted RBP17.77■□□□□ 0.44
RXRB-203ENST00000481441 ARL14Q8N4G2 192 aa17.77■□□□□ 0.44
RXRB-203ENST00000481441 OR2A12Q8NGT7 310 aa17.77■□□□□ 0.44
RXRB-203ENST00000481441 TPCN2Q8NHX9 752 aa17.77■□□□□ 0.44
RXRB-203ENST00000481441 WDR36Q8NI36 951 aaKnown RBP17.77■□□□□ 0.44
RXRB-203ENST00000481441 RPRD1AQ96P16 312 aaPredicted RBP17.77■□□□□ 0.44
RXRB-203ENST00000481441 NT5C1BQ96P26 610 aa17.77■□□□□ 0.44
RXRB-203ENST00000481441 CCNL2Q96S94 520 aaPredicted RBP17.77■□□□□ 0.44
RXRB-203ENST00000481441 SLC4A5Q9BY07 1137 aa17.77■□□□□ 0.44
RXRB-203ENST00000481441 FAM117AQ9C073 453 aa17.77■□□□□ 0.44
RXRB-203ENST00000481441 POPDC2Q9HBU9 364 aa17.77■□□□□ 0.44
RXRB-203ENST00000481441 SLC12A6Q9UHW9 1150 aa17.77■□□□□ 0.44
RXRB-203ENST00000481441 KLF15Q9UIH9 416 aa17.77■□□□□ 0.44
RXRB-203ENST00000481441 SALL4Q9UJQ4 1053 aa17.77■□□□□ 0.44
RXRB-203ENST00000481441 VPS28Q9UK41 221 aa17.77■□□□□ 0.44
RXRB-203ENST00000481441 HEMK1Q9Y5R4 338 aaPredicted RBP17.77■□□□□ 0.44
RXRB-203ENST00000481441 DOPEY2Q9Y3R5 2298 aa17.77■□□□□ 0.44
RXRB-203ENST00000481441 TLN1Q9Y490 2541 aaKnown RBP17.76■□□□□ 0.43
RXRB-203ENST00000481441 SPTY2D1-AS1A0A0U1RR47 76 aa17.76■□□□□ 0.43
RXRB-203ENST00000481441 POM121BA6NF01 834 aa17.76■□□□□ 0.43
RXRB-203ENST00000481441 TNFSF15O95150 251 aa17.76■□□□□ 0.43
RXRB-203ENST00000481441 MT-CO1P00395 513 aa17.76■□□□□ 0.43
RXRB-203ENST00000481441 PDX1P52945 283 aa17.76■□□□□ 0.43
RXRB-203ENST00000481441 FGL2Q14314 439 aa17.76■□□□□ 0.43
RXRB-203ENST00000481441 LINC00303Q3SY05 128 aa17.76■□□□□ 0.43
RXRB-203ENST00000481441 PERM1Q5SV97 790 aa17.76■□□□□ 0.43
RXRB-203ENST00000481441 CRTC1Q6UUV9 634 aa17.76■□□□□ 0.43
RXRB-203ENST00000481441 KRBA2Q6ZNG9 492 aa17.76■□□□□ 0.43
RXRB-203ENST00000481441 ERN2Q76MJ5 926 aaKnown RBP17.76■□□□□ 0.43
RXRB-203ENST00000481441 PARGQ86W56 976 aa17.76■□□□□ 0.43
RXRB-203ENST00000481441 PPM1KQ8N3J5 372 aa17.76■□□□□ 0.43
RXRB-203ENST00000481441 ATXN7L1Q9ULK2 861 aaPredicted RBP17.76■□□□□ 0.43
RXRB-203ENST00000481441 TBC1D30Q9Y2I9 924 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms