RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 PRAMEF26H0Y7S4 382 aa11.71□□□□□ -0.53
CCM2-213ENST00000480658 CBX4O00257 560 aa11.71□□□□□ -0.53
CCM2-213ENST00000480658 FGF10O15520 208 aaPredicted RBP11.71□□□□□ -0.53
CCM2-213ENST00000480658 TNFSF14O43557 240 aa11.71□□□□□ -0.53
CCM2-213ENST00000480658 SH3BP5O60239 455 aa11.71□□□□□ -0.53
CCM2-213ENST00000480658 SRCP12931 536 aa11.71□□□□□ -0.53
CCM2-213ENST00000480658 GPD1P21695 349 aa11.71□□□□□ -0.53
CCM2-213ENST00000480658 ADRA1BP35368 520 aa11.71□□□□□ -0.53
CCM2-213ENST00000480658 ATP11AP98196 1134 aa11.71□□□□□ -0.53
CCM2-213ENST00000480658 GNA12Q03113 381 aa11.71□□□□□ -0.53
CCM2-213ENST00000480658 RAD51Q06609 339 aa11.71□□□□□ -0.53
CCM2-213ENST00000480658 STAT4Q14765 748 aa11.71□□□□□ -0.53
CCM2-213ENST00000480658 ALFQ53S48 1182 aa11.71□□□□□ -0.53
CCM2-213ENST00000480658 HS1BP3Q53T59 392 aa11.71□□□□□ -0.53
CCM2-213ENST00000480658 C22orf39Q6P5X5 142 aa11.71□□□□□ -0.53
CCM2-213ENST00000480658 Q6ZVU0 165 aa11.71□□□□□ -0.53
CCM2-213ENST00000480658 TFAP2DQ7Z6R9 452 aa11.71□□□□□ -0.53
CCM2-213ENST00000480658 ZNF683Q8IZ20 524 aa11.71□□□□□ -0.53
CCM2-213ENST00000480658 RHBDD1Q8TEB9 315 aa11.71□□□□□ -0.53
CCM2-213ENST00000480658 SLC20A1Q8WUM9 679 aa11.71□□□□□ -0.53
CCM2-213ENST00000480658 CENPIQ92674 756 aaPredicted RBP11.71□□□□□ -0.53
CCM2-213ENST00000480658 RAB7BQ96AH8 199 aa11.71□□□□□ -0.53
CCM2-213ENST00000480658 TBC1D31Q96DN5 1066 aa11.71□□□□□ -0.53
CCM2-213ENST00000480658 ELF4Q99607 663 aaPredicted RBP11.71□□□□□ -0.53
CCM2-213ENST00000480658 EPAS1Q99814 870 aa11.71□□□□□ -0.53
CCM2-213ENST00000480658 SCNM1Q9BWG6 230 aa11.71□□□□□ -0.53
CCM2-213ENST00000480658 HDAC8Q9BY41 377 aa11.71□□□□□ -0.53
CCM2-213ENST00000480658 EDEM3Q9BZQ6 932 aa11.71□□□□□ -0.53
CCM2-213ENST00000480658 MAGEH1Q9H213 219 aa11.71□□□□□ -0.53
CCM2-213ENST00000480658 CATSPERBQ9H7T0 1116 aa11.71□□□□□ -0.53
CCM2-213ENST00000480658 FSCN3Q9NQT6 498 aa11.71□□□□□ -0.53
CCM2-213ENST00000480658 TMEM248Q9NWD8 314 aa11.71□□□□□ -0.53
CCM2-213ENST00000480658 FNDC3AQ9Y2H6 1198 aaKnown RBP11.71□□□□□ -0.53
CCM2-213ENST00000480658 SNX11Q9Y5W9 270 aa11.71□□□□□ -0.53
CCM2-213ENST00000480658 A0A1B0GTQ1 180 aa11.7□□□□□ -0.54
CCM2-213ENST00000480658 C10orf142B7Z368 130 aa11.7□□□□□ -0.54
CCM2-213ENST00000480658 KPNA3O00505 521 aaPredicted RBP11.7□□□□□ -0.54
CCM2-213ENST00000480658 RAMP2O60895 175 aa11.7□□□□□ -0.54
CCM2-213ENST00000480658 CBFA2T3O75081 653 aa11.7□□□□□ -0.54
CCM2-213ENST00000480658 C1SP09871 688 aa11.7□□□□□ -0.54
CCM2-213ENST00000480658 FTH1P19P0C7X4 201 aa11.7□□□□□ -0.54
CCM2-213ENST00000480658 ATXN8OSP0DMR3 200 aa11.7□□□□□ -0.54
CCM2-213ENST00000480658 CHRNA3P32297 505 aa11.7□□□□□ -0.54
CCM2-213ENST00000480658 DRD3P35462 400 aa11.7□□□□□ -0.54
CCM2-213ENST00000480658 ZNF143P52747 638 aaPredicted RBP11.7□□□□□ -0.54
CCM2-213ENST00000480658 SNRPD1P62314 119 aaKnown RBP11.7□□□□□ -0.54
CCM2-213ENST00000480658 GRM3Q14832 879 aa11.7□□□□□ -0.54
CCM2-213ENST00000480658 CDO1Q16878 200 aa11.7□□□□□ -0.54
CCM2-213ENST00000480658 AGBL4Q5VU57 503 aa11.7□□□□□ -0.54
CCM2-213ENST00000480658 KIAA1161Q6NSJ0 714 aa11.7□□□□□ -0.54
CCM2-213ENST00000480658 RWDD4Q6NW29 188 aaKnown RBP11.7□□□□□ -0.54
CCM2-213ENST00000480658 DCUN1D2Q6PH85 259 aa11.7□□□□□ -0.54
CCM2-213ENST00000480658 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.7□□□□□ -0.54
CCM2-213ENST00000480658 MON1BQ7L1V2 547 aa11.7□□□□□ -0.54
CCM2-213ENST00000480658 RAB44Q7Z6P3 723 aaPredicted RBP11.7□□□□□ -0.54
CCM2-213ENST00000480658 SLFN11Q7Z7L1 901 aa11.7□□□□□ -0.54
CCM2-213ENST00000480658 VPS36Q86VN1 386 aa11.7□□□□□ -0.54
CCM2-213ENST00000480658 DCP2Q8IU60 420 aaKnown RBP11.7□□□□□ -0.54
CCM2-213ENST00000480658 AOPEPQ8N6M6 819 aa11.7□□□□□ -0.54
CCM2-213ENST00000480658 BAHD1Q8TBE0 780 aaPredicted RBP11.7□□□□□ -0.54
CCM2-213ENST00000480658 FAM172AQ8WUF8 416 aa11.7□□□□□ -0.54
CCM2-213ENST00000480658 RXFP2Q8WXD0 754 aa11.7□□□□□ -0.54
CCM2-213ENST00000480658 AGPAT1Q99943 283 aa11.7□□□□□ -0.54
CCM2-213ENST00000480658 CNPY3Q9BT09 278 aa11.7□□□□□ -0.54
CCM2-213ENST00000480658 PARVAQ9NVD7 372 aa11.7□□□□□ -0.54
CCM2-213ENST00000480658 EVA1BQ9NVM1 165 aa11.7□□□□□ -0.54
CCM2-213ENST00000480658 MPP6Q9NZW5 540 aa11.7□□□□□ -0.54
CCM2-213ENST00000480658 FTSJ1Q9UET6 329 aa11.7□□□□□ -0.54
CCM2-213ENST00000480658 SERGEFQ9UGK8 458 aa11.7□□□□□ -0.54
CCM2-213ENST00000480658 WASF3Q9UPY6 502 aa11.7□□□□□ -0.54
CCM2-213ENST00000480658 PCDHGA1Q9Y5H4 931 aa11.7□□□□□ -0.54
CCM2-213ENST00000480658 SCINQ9Y6U3 715 aa11.7□□□□□ -0.54
CCM2-213ENST00000480658 SPAARA0A1B0GVQ0 90 aa11.69□□□□□ -0.54
CCM2-213ENST00000480658 TLR4O00206 839 aa11.69□□□□□ -0.54
CCM2-213ENST00000480658 CNTN5O94779 1100 aa11.69□□□□□ -0.54
CCM2-213ENST00000480658 TPM3P06753 285 aa11.69□□□□□ -0.54
CCM2-213ENST00000480658 PLEKP08567 350 aaPredicted RBP11.69□□□□□ -0.54
CCM2-213ENST00000480658 MYBL1P10243 752 aa11.69□□□□□ -0.54
CCM2-213ENST00000480658 ITGB7P26010 798 aa11.69□□□□□ -0.54
CCM2-213ENST00000480658 AKT2P31751 481 aa11.69□□□□□ -0.54
CCM2-213ENST00000480658 L1CAMP32004 1257 aa11.69□□□□□ -0.54
CCM2-213ENST00000480658 KLK7P49862 253 aa11.69□□□□□ -0.54
CCM2-213ENST00000480658 ZNF165P49910 485 aa11.69□□□□□ -0.54
CCM2-213ENST00000480658 NEK3P51956 506 aa11.69□□□□□ -0.54
CCM2-213ENST00000480658 YBEYP58557 167 aaPredicted RBP11.69□□□□□ -0.54
CCM2-213ENST00000480658 PARP15Q460N3 678 aa11.69□□□□□ -0.54
CCM2-213ENST00000480658 CCDC14Q49A88 953 aa11.69□□□□□ -0.54
CCM2-213ENST00000480658 ANO6Q4KMQ2 910 aa11.69□□□□□ -0.54
CCM2-213ENST00000480658 ERN2Q76MJ5 926 aaKnown RBP11.69□□□□□ -0.54
CCM2-213ENST00000480658 C14orf80Q86SX3 495 aa11.69□□□□□ -0.54
CCM2-213ENST00000480658 PSTKQ8IV42 348 aaKnown RBP11.69□□□□□ -0.54
CCM2-213ENST00000480658 EMC1Q8N766 993 aa11.69□□□□□ -0.54
CCM2-213ENST00000480658 KDF1Q8NAX2 398 aaPredicted RBP11.69□□□□□ -0.54
CCM2-213ENST00000480658 OR2A12Q8NGT7 310 aa11.69□□□□□ -0.54
CCM2-213ENST00000480658 SLC30A5Q8TAD4 765 aa11.69□□□□□ -0.54
CCM2-213ENST00000480658 SLC6A18Q96N87 628 aa11.69□□□□□ -0.54
CCM2-213ENST00000480658 HEPHQ9BQS7 1158 aa11.69□□□□□ -0.54
CCM2-213ENST00000480658 ORAI3Q9BRQ5 295 aa11.69□□□□□ -0.54
CCM2-213ENST00000480658 SPON2Q9BUD6 331 aa11.69□□□□□ -0.54
CCM2-213ENST00000480658 MTG2Q9H4K7 406 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms