RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 TCHHL1Q5QJ38 904 aaPredicted RBP6.24□□□□□ -1.41
PRPF4B-205ENST00000480058 GJD3Q8N144 294 aa6.24□□□□□ -1.41
PRPF4B-205ENST00000480058 LRRC17Q8N6Y2 441 aa6.24□□□□□ -1.41
PRPF4B-205ENST00000480058 SLC4A11Q8NBS3 891 aa6.24□□□□□ -1.41
PRPF4B-205ENST00000480058 PARK7Q99497 189 aaKnown RBP6.24□□□□□ -1.41
PRPF4B-205ENST00000480058 NUSAP1Q9BXS6 441 aaKnown RBP6.24□□□□□ -1.41
PRPF4B-205ENST00000480058 TRIM8Q9BZR9 551 aa6.24□□□□□ -1.41
PRPF4B-205ENST00000480058 DYRK1BQ9Y463 629 aa6.24□□□□□ -1.41
PRPF4B-205ENST00000480058 CLTCL1P53675 1640 aa6.24□□□□□ -1.41
PRPF4B-205ENST00000480058 A0A1W2PQ67 120 aa6.24□□□□□ -1.41
PRPF4B-205ENST00000480058 FAM163BP0C2L3 166 aa6.24□□□□□ -1.41
PRPF4B-205ENST00000480058 STAG3L1P0CL83 205 aa6.24□□□□□ -1.41
PRPF4B-205ENST00000480058 DGKAP23743 735 aa6.24□□□□□ -1.41
PRPF4B-205ENST00000480058 CERS6Q6ZMG9 384 aa6.24□□□□□ -1.41
PRPF4B-205ENST00000480058 TSHZ1Q6ZSZ6 1077 aa6.24□□□□□ -1.41
PRPF4B-205ENST00000480058 THAP5Q7Z6K1 395 aa6.24□□□□□ -1.41
PRPF4B-205ENST00000480058 SLC47A2Q86VL8 602 aa6.24□□□□□ -1.41
PRPF4B-205ENST00000480058 ZNF276Q8N554 614 aa6.24□□□□□ -1.41
PRPF4B-205ENST00000480058 GOLM1Q8NBJ4 401 aa6.24□□□□□ -1.41
PRPF4B-205ENST00000480058 LRRN4CLQ8ND94 238 aa6.24□□□□□ -1.41
PRPF4B-205ENST00000480058 GIPC3Q8TF64 312 aa6.24□□□□□ -1.41
PRPF4B-205ENST00000480058 TSPEARQ8WU66 669 aa6.24□□□□□ -1.41
PRPF4B-205ENST00000480058 HEXDCQ8WVB3 486 aa6.24□□□□□ -1.41
PRPF4B-205ENST00000480058 CD101Q93033 1021 aa6.24□□□□□ -1.41
PRPF4B-205ENST00000480058 TMCO6Q96DC7 493 aa6.24□□□□□ -1.41
PRPF4B-205ENST00000480058 FAM84AQ96KN4 292 aa6.24□□□□□ -1.41
PRPF4B-205ENST00000480058 COPS7BQ9H9Q2 264 aaPredicted RBP6.24□□□□□ -1.41
PRPF4B-205ENST00000480058 ING3Q9NXR8 418 aa6.24□□□□□ -1.41
PRPF4B-205ENST00000480058 JCADQ9P266 1359 aa6.24□□□□□ -1.41
PRPF4B-205ENST00000480058 MPZL2O60487 215 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 IPO13O94829 963 aaKnown RBP6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 CCNE2O96020 404 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 ITGA2BP08514 1039 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 AKAP5P24588 427 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 TIE1P35590 1138 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 MAPKAPK3Q16644 382 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 DPY19L1Q2PZI1 675 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 TYSND1Q2T9J0 566 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 CCDC157Q569K6 752 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 FAXCQ5TGI0 409 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 TDRD10Q5VZ19 366 aaKnown RBP6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 LIN54Q6MZP7 749 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 VSIG10LQ86VR7 867 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 OR8H2Q8N162 312 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 POU5F2Q8N7G0 328 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 TINF2Q9BSI4 451 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 ADAM33Q9BZ11 813 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 PIGUQ9H490 435 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 POPDC2Q9HBU9 364 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 DNAJC28Q9NX36 388 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 EURLQ9NYK6 297 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 TAS2R1Q9NYW7 299 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 SAE1Q9UBE0 346 aaPredicted RBP6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 SNCAIPQ9Y6H5 919 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 GPR182O15218 404 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 IDH3BO43837 385 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 C7P10643 843 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 FUT2Q10981 343 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 ATP1A4Q13733 1029 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 QPRTQ15274 297 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 OTUD3Q5T2D3 398 aaPredicted RBP6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 SLC27A1Q6PCB7 646 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 DENND5BQ6ZUT9 1274 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 ECHDC2Q86YB7 292 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 RTL3Q8N8U3 475 aaKnown RBP6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 ZFP28Q8NHY6 868 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 USP33Q8TEY7 942 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 PRCCQ92733 491 aaPredicted RBP6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 PI4K2AQ9BTU6 479 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 SLC39A8Q9C0K1 460 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 NOL11Q9H8H0 719 aaKnown RBP6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 TSPAN16Q9UKR8 245 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 WDR37Q9Y2I8 494 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 NFAT5O94916 1531 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 KIAA1210Q9ULL0 1709 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 TAF4O00268 1085 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 ULK1O75385 1050 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 WBP4O75554 376 aaKnown RBP6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 VAPBO95292 243 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 SLC26A3P40879 764 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 FMO1Q01740 532 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 TUBA3CQ13748 450 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 TRIM25Q14258 630 aaKnown RBP6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 NOMO1Q15155 1222 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 GJC2Q5T442 439 aaPredicted RBP6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 ZNF280DQ6N043 979 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 UNC5BQ8IZJ1 945 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 FITM2Q8N6M3 262 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 GLB1L3Q8NCI6 653 aaPredicted RBP6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 C9orf43Q8TAL5 461 aaPredicted RBP6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 TUBGCP5Q96RT8 1024 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 CHCHD6Q9BRQ6 235 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 DENND2DQ9H6A0 471 aaPredicted RBP6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 MID1IP1Q9NPA3 183 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 SAMD4AQ9UPU9 718 aaKnown RBP6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 LRRC42Q9Y546 428 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 STON1Q9Y6Q2 735 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 ADAMTS13Q76LX8 1427 aa6.23□□□□□ -1.41
PRPF4B-205ENST00000480058 A0A0B4J269 797 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms