RNA–Protein interactions for RNA: ENST00000479899.5

CCDC58-205, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3 BASIC

Gene CCDC58, Length 545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-205ENST00000479899 CPNE5Q9HCH3 593 aa11.09□□□□□ -0.63
CCDC58-205ENST00000479899 ST7Q9NRC1 585 aa11.09□□□□□ -0.63
CCDC58-205ENST00000479899 TJP2Q9UDY2 1190 aa11.09□□□□□ -0.63
CCDC58-205ENST00000479899 NAALADL1Q9UQQ1 740 aa11.09□□□□□ -0.63
CCDC58-205ENST00000479899 HPSEQ9Y251 543 aa11.09□□□□□ -0.63
CCDC58-205ENST00000479899 PCDHB4Q9Y5E5 795 aa11.09□□□□□ -0.63
CCDC58-205ENST00000479899 TRIM38O00635 465 aa11.08□□□□□ -0.64
CCDC58-205ENST00000479899 APOEP02649 317 aa11.08□□□□□ -0.64
CCDC58-205ENST00000479899 MPOP05164 745 aa11.08□□□□□ -0.64
CCDC58-205ENST00000479899 MYF5P13349 255 aa11.08□□□□□ -0.64
CCDC58-205ENST00000479899 RHOQP17081 205 aa11.08□□□□□ -0.64
CCDC58-205ENST00000479899 TACR2P21452 398 aa11.08□□□□□ -0.64
CCDC58-205ENST00000479899 PCBP4P57723 403 aaKnown RBP11.08□□□□□ -0.64
CCDC58-205ENST00000479899 GABREP78334 506 aa11.08□□□□□ -0.64
CCDC58-205ENST00000479899 ILKQ13418 452 aa11.08□□□□□ -0.64
CCDC58-205ENST00000479899 ELAVL3Q14576 367 aaKnown RBP11.08□□□□□ -0.64
CCDC58-205ENST00000479899 STAT4Q14765 748 aa11.08□□□□□ -0.64
CCDC58-205ENST00000479899 EDRF1Q3B7T1 1238 aa11.08□□□□□ -0.64
CCDC58-205ENST00000479899 ACCSLQ4AC99 568 aa11.08□□□□□ -0.64
CCDC58-205ENST00000479899 HS1BP3Q53T59 392 aa11.08□□□□□ -0.64
CCDC58-205ENST00000479899 ARHGAP40Q5TG30 622 aa11.08□□□□□ -0.64
CCDC58-205ENST00000479899 ATL3Q6DD88 541 aa11.08□□□□□ -0.64
CCDC58-205ENST00000479899 PCSK4Q6UW60 755 aa11.08□□□□□ -0.64
CCDC58-205ENST00000479899 LCLAT1Q6UWP7 414 aa11.08□□□□□ -0.64
CCDC58-205ENST00000479899 KANSL1Q7Z3B3 1105 aa11.08□□□□□ -0.64
CCDC58-205ENST00000479899 HSCBQ8IWL3 235 aa11.08□□□□□ -0.64
CCDC58-205ENST00000479899 SCML4Q8N228 414 aa11.08□□□□□ -0.64
CCDC58-205ENST00000479899 UBR7Q8N806 425 aa11.08□□□□□ -0.64
CCDC58-205ENST00000479899 MFSD2AQ8NA29 543 aa11.08□□□□□ -0.64
CCDC58-205ENST00000479899 KDM1BQ8NB78 822 aa11.08□□□□□ -0.64
CCDC58-205ENST00000479899 SLC35F5Q8WV83 523 aa11.08□□□□□ -0.64
CCDC58-205ENST00000479899 KLK6Q92876 244 aa11.08□□□□□ -0.64
CCDC58-205ENST00000479899 KAT5Q92993 513 aa11.08□□□□□ -0.64
CCDC58-205ENST00000479899 ZSWIM1Q9BR11 485 aa11.08□□□□□ -0.64
CCDC58-205ENST00000479899 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.08□□□□□ -0.64
CCDC58-205ENST00000479899 ERVMER34-1Q9H9K5 563 aa11.08□□□□□ -0.64
CCDC58-205ENST00000479899 CYTH4Q9UIA0 394 aa11.08□□□□□ -0.64
CCDC58-205ENST00000479899 TLR6Q9Y2C9 796 aa11.08□□□□□ -0.64
CCDC58-205ENST00000479899 SYNJ2BP-COX16A0A087WUM0 186 aa11.07□□□□□ -0.64
CCDC58-205ENST00000479899 A6NJY4 79 aa11.07□□□□□ -0.64
CCDC58-205ENST00000479899 F5H5T6 163 aa11.07□□□□□ -0.64
CCDC58-205ENST00000479899 H3BM21 787 aa11.07□□□□□ -0.64
CCDC58-205ENST00000479899 J3QKU1 62 aa11.07□□□□□ -0.64
CCDC58-205ENST00000479899 CDK2AP1O14519 115 aa11.07□□□□□ -0.64
CCDC58-205ENST00000479899 LATO43561 262 aa11.07□□□□□ -0.64
CCDC58-205ENST00000479899 PLRG1O43660 514 aaKnown RBP11.07□□□□□ -0.64
CCDC58-205ENST00000479899 MAGEC1O60732 1142 aa11.07□□□□□ -0.64
CCDC58-205ENST00000479899 MT-CO3P00414 261 aa11.07□□□□□ -0.64
CCDC58-205ENST00000479899 PRLRP16471 622 aa11.07□□□□□ -0.64
CCDC58-205ENST00000479899 ZNF18P17022 549 aa11.07□□□□□ -0.64
CCDC58-205ENST00000479899 TBXAS1P24557 533 aaPredicted RBP11.07□□□□□ -0.64
CCDC58-205ENST00000479899 ACP1P24666 158 aa11.07□□□□□ -0.64
CCDC58-205ENST00000479899 RXRGP48443 463 aa11.07□□□□□ -0.64
CCDC58-205ENST00000479899 CNTN1Q12860 1018 aa11.07□□□□□ -0.64
CCDC58-205ENST00000479899 CRTC2Q53ET0 693 aaPredicted RBP11.07□□□□□ -0.64
CCDC58-205ENST00000479899 ZC3H12AQ5D1E8 599 aaKnown RBP11.07□□□□□ -0.64
CCDC58-205ENST00000479899 BROXQ5VW32 411 aa11.07□□□□□ -0.64
CCDC58-205ENST00000479899 KRBA2Q6ZNG9 492 aa11.07□□□□□ -0.64
CCDC58-205ENST00000479899 PPM1KQ8N3J5 372 aa11.07□□□□□ -0.64
CCDC58-205ENST00000479899 DCBLD1Q8N8Z6 715 aa11.07□□□□□ -0.64
CCDC58-205ENST00000479899 ZNF248Q8NDW4 579 aa11.07□□□□□ -0.64
CCDC58-205ENST00000479899 OR8D1Q8WZ84 308 aa11.07□□□□□ -0.64
CCDC58-205ENST00000479899 AZIN2Q96A70 460 aa11.07□□□□□ -0.64
CCDC58-205ENST00000479899 SPAG5Q96R06 1193 aa11.07□□□□□ -0.64
CCDC58-205ENST00000479899 TSG101Q99816 390 aa11.07□□□□□ -0.64
CCDC58-205ENST00000479899 CALN1Q9BXU9 219 aa11.07□□□□□ -0.64
CCDC58-205ENST00000479899 GOLPH3LQ9H4A5 285 aa11.07□□□□□ -0.64
CCDC58-205ENST00000479899 FZD3Q9NPG1 666 aa11.07□□□□□ -0.64
CCDC58-205ENST00000479899 UCKL1Q9NWZ5 548 aa11.07□□□□□ -0.64
CCDC58-205ENST00000479899 COX16Q9P0S2 106 aa11.07□□□□□ -0.64
CCDC58-205ENST00000479899 ARHGAP20Q9P2F6 1191 aa11.07□□□□□ -0.64
CCDC58-205ENST00000479899 SLC25A13Q9UJS0 675 aa11.07□□□□□ -0.64
CCDC58-205ENST00000479899 SARDHQ9UL12 918 aa11.07□□□□□ -0.64
CCDC58-205ENST00000479899 NOVA2Q9UNW9 492 aaKnown RBP11.07□□□□□ -0.64
CCDC58-205ENST00000479899 FLNBO75369 2602 aaKnown RBP11.07□□□□□ -0.64
CCDC58-205ENST00000479899 TRIM49BA6NDI0 452 aa11.06□□□□□ -0.64
CCDC58-205ENST00000479899 C1QTNF3-AMACRE9PGA6 284 aa11.06□□□□□ -0.64
CCDC58-205ENST00000479899 RNF225M0QZC1 329 aaPredicted RBP11.06□□□□□ -0.64
CCDC58-205ENST00000479899 SLC16A3O15427 465 aaKnown RBP11.06□□□□□ -0.64
CCDC58-205ENST00000479899 SLC31A1O15431 190 aa11.06□□□□□ -0.64
CCDC58-205ENST00000479899 USP12O75317 370 aa11.06□□□□□ -0.64
CCDC58-205ENST00000479899 FBXO21O94952 628 aa11.06□□□□□ -0.64
CCDC58-205ENST00000479899 FYNP06241 537 aa11.06□□□□□ -0.64
CCDC58-205ENST00000479899 PAEPP09466 180 aa11.06□□□□□ -0.64
CCDC58-205ENST00000479899 THEGLP0DJG4 465 aa11.06□□□□□ -0.64
CCDC58-205ENST00000479899 TMPRSS3P57727 454 aa11.06□□□□□ -0.64
CCDC58-205ENST00000479899 LY6DQ14210 128 aa11.06□□□□□ -0.64
CCDC58-205ENST00000479899 SETMARQ53H47 684 aaPredicted RBP11.06□□□□□ -0.64
CCDC58-205ENST00000479899 AGBL4Q5VU57 503 aa11.06□□□□□ -0.64
CCDC58-205ENST00000479899 SYPL2Q5VXT5 272 aa11.06□□□□□ -0.64
CCDC58-205ENST00000479899 TREML4Q6UXN2 200 aa11.06□□□□□ -0.64
CCDC58-205ENST00000479899 DSG4Q86SJ6 1040 aa11.06□□□□□ -0.64
CCDC58-205ENST00000479899 ANKMY2Q8IV38 441 aa11.06□□□□□ -0.64
CCDC58-205ENST00000479899 CCAR2Q8N163 923 aaKnown RBP11.06□□□□□ -0.64
CCDC58-205ENST00000479899 LSM14AQ8ND56 463 aaKnown RBP11.06□□□□□ -0.64
CCDC58-205ENST00000479899 KCNE4Q8WWG9 221 aa11.06□□□□□ -0.64
CCDC58-205ENST00000479899 RFFLQ8WZ73 363 aa11.06□□□□□ -0.64
CCDC58-205ENST00000479899 KLHDC7BQ96G42 594 aa11.06□□□□□ -0.64
CCDC58-205ENST00000479899 SLC39A13Q96H72 371 aa11.06□□□□□ -0.64
CCDC58-205ENST00000479899 NT5C1BQ96P26 610 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms