RNA–Protein interactions for RNA: ENST00000479653.5

CCDC18-208, Transcript of coiled-coil domain containing 18, humanhuman

TSL 3

Gene CCDC18, Length 541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-208ENST00000479653 SLC35F3Q8IY50 421 aa11.48□□□□□ -0.57
CCDC18-208ENST00000479653 SRRM1Q8IYB3 904 aaKnown RBP11.48□□□□□ -0.57
CCDC18-208ENST00000479653 PARD3BQ8TEW8 1205 aa11.48□□□□□ -0.57
CCDC18-208ENST00000479653 SSC4DQ8WTU2 575 aa11.48□□□□□ -0.57
CCDC18-208ENST00000479653 USP7Q93009 1102 aa11.48□□□□□ -0.57
CCDC18-208ENST00000479653 MYEOVQ96EZ4 313 aa11.48□□□□□ -0.57
CCDC18-208ENST00000479653 BMFQ96LC9 184 aa11.48□□□□□ -0.57
CCDC18-208ENST00000479653 PRICKLE1Q96MT3 831 aaPredicted RBP11.48□□□□□ -0.57
CCDC18-208ENST00000479653 DDX50Q9BQ39 737 aaKnown RBP11.48□□□□□ -0.57
CCDC18-208ENST00000479653 SLC12A9Q9BXP2 914 aa11.48□□□□□ -0.57
CCDC18-208ENST00000479653 IRX2Q9BZI1 471 aaPredicted RBP11.48□□□□□ -0.57
CCDC18-208ENST00000479653 UBXN6Q9BZV1 441 aa11.48□□□□□ -0.57
CCDC18-208ENST00000479653 FOXJ2Q9P0K8 574 aa11.48□□□□□ -0.57
CCDC18-208ENST00000479653 TFIP11Q9UBB9 837 aaKnown RBP11.48□□□□□ -0.57
CCDC18-208ENST00000479653 KLF15Q9UIH9 416 aa11.48□□□□□ -0.57
CCDC18-208ENST00000479653 RCOR1Q9UKL0 485 aa11.48□□□□□ -0.57
CCDC18-208ENST00000479653 SPTY2D1-AS1A0A0U1RR47 76 aa11.47□□□□□ -0.57
CCDC18-208ENST00000479653 POM121BA6NF01 834 aa11.47□□□□□ -0.57
CCDC18-208ENST00000479653 NTN3O00634 580 aaPredicted RBP11.47□□□□□ -0.57
CCDC18-208ENST00000479653 EIF3DO15371 548 aaKnown RBP eCLIP11.47□□□□□ -0.57
CCDC18-208ENST00000479653 VPS4BO75351 444 aa11.47□□□□□ -0.57
CCDC18-208ENST00000479653 LUC7L3O95232 432 aaKnown RBP11.47□□□□□ -0.57
CCDC18-208ENST00000479653 TNFRSF8P28908 595 aa11.47□□□□□ -0.57
CCDC18-208ENST00000479653 PIK3CAP42336 1068 aa11.47□□□□□ -0.57
CCDC18-208ENST00000479653 MLLT10P55197 1068 aa11.47□□□□□ -0.57
CCDC18-208ENST00000479653 DLG4P78352 724 aa11.47□□□□□ -0.57
CCDC18-208ENST00000479653 CCL7P80098 99 aa11.47□□□□□ -0.57
CCDC18-208ENST00000479653 INCA1Q0VD86 236 aa11.47□□□□□ -0.57
CCDC18-208ENST00000479653 PDE1CQ14123 709 aaPredicted RBP11.47□□□□□ -0.57
CCDC18-208ENST00000479653 SLC39A14Q15043 492 aa11.47□□□□□ -0.57
CCDC18-208ENST00000479653 NFKBIBQ15653 356 aa11.47□□□□□ -0.57
CCDC18-208ENST00000479653 NUGGCQ68CJ6 796 aa11.47□□□□□ -0.57
CCDC18-208ENST00000479653 NADSYN1Q6IA69 706 aa11.47□□□□□ -0.57
CCDC18-208ENST00000479653 ESRP1Q6NXG1 681 aaKnown RBP11.47□□□□□ -0.57
CCDC18-208ENST00000479653 FAM173BQ6P4H8 233 aa11.47□□□□□ -0.57
CCDC18-208ENST00000479653 DTX1Q86Y01 620 aa11.47□□□□□ -0.57
CCDC18-208ENST00000479653 TMEM74Q96NL1 305 aa11.47□□□□□ -0.57
CCDC18-208ENST00000479653 USP28Q96RU2 1077 aa11.47□□□□□ -0.57
CCDC18-208ENST00000479653 BOCQ9BWV1 1114 aa11.47□□□□□ -0.57
CCDC18-208ENST00000479653 LRRC4Q9HBW1 653 aa11.47□□□□□ -0.57
CCDC18-208ENST00000479653 ABCC13Q9NSE7 274 aa11.47□□□□□ -0.57
CCDC18-208ENST00000479653 SPASTQ9UBP0 616 aa11.47□□□□□ -0.57
CCDC18-208ENST00000479653 PPM1HQ9ULR3 514 aa11.47□□□□□ -0.57
CCDC18-208ENST00000479653 VPS4AQ9UN37 437 aa11.47□□□□□ -0.57
CCDC18-208ENST00000479653 CACNA1DQ01668 2161 aa11.46□□□□□ -0.57
CCDC18-208ENST00000479653 A0A1W2PQ27 194 aa11.46□□□□□ -0.57
CCDC18-208ENST00000479653 A0A1W2PQ64 194 aa11.46□□□□□ -0.57
CCDC18-208ENST00000479653 A0A1W2PQC6 194 aa11.46□□□□□ -0.57
CCDC18-208ENST00000479653 YJEFN3A6XGL0 299 aa11.46□□□□□ -0.57
CCDC18-208ENST00000479653 E7ENQ6 273 aa11.46□□□□□ -0.57
CCDC18-208ENST00000479653 SPTLC2O15270 562 aa11.46□□□□□ -0.57
CCDC18-208ENST00000479653 PPP6R2O75170 966 aa11.46□□□□□ -0.57
CCDC18-208ENST00000479653 GCATO75600 419 aa11.46□□□□□ -0.57
CCDC18-208ENST00000479653 PAK4O96013 591 aaPredicted RBP11.46□□□□□ -0.57
CCDC18-208ENST00000479653 ASS1P00966 412 aaKnown RBP11.46□□□□□ -0.57
CCDC18-208ENST00000479653 RPLP0P05388 317 aaKnown RBP11.46□□□□□ -0.57
CCDC18-208ENST00000479653 ANXA6P08133 673 aa11.46□□□□□ -0.57
CCDC18-208ENST00000479653 UQCRFS1P47985 274 aa11.46□□□□□ -0.57
CCDC18-208ENST00000479653 CD97P48960 835 aa11.46□□□□□ -0.57
CCDC18-208ENST00000479653 TBX4P57082 545 aa11.46□□□□□ -0.57
CCDC18-208ENST00000479653 UBE2HP62256 183 aa11.46□□□□□ -0.57
CCDC18-208ENST00000479653 SNRPFP62306 86 aaKnown RBP11.46□□□□□ -0.57
CCDC18-208ENST00000479653 CCDC15Q0P6D6 951 aa11.46□□□□□ -0.57
CCDC18-208ENST00000479653 KIF26BQ2KJY2 2108 aa11.46□□□□□ -0.57
CCDC18-208ENST00000479653 DCAF6Q58WW2 860 aa11.46□□□□□ -0.57
CCDC18-208ENST00000479653 PRRT3Q5FWE3 981 aa11.46□□□□□ -0.57
CCDC18-208ENST00000479653 PIP5KL1Q5T9C9 394 aa11.46□□□□□ -0.57
CCDC18-208ENST00000479653 SEL1L3Q68CR1 1132 aa11.46□□□□□ -0.57
CCDC18-208ENST00000479653 BHLHA9Q7RTU4 235 aa11.46□□□□□ -0.57
CCDC18-208ENST00000479653 SDR16C5Q8N3Y7 309 aa11.46□□□□□ -0.57
CCDC18-208ENST00000479653 LINC00301Q8NCQ3 95 aa11.46□□□□□ -0.57
CCDC18-208ENST00000479653 FAM174AQ8TBP5 190 aa11.46□□□□□ -0.57
CCDC18-208ENST00000479653 FRS2Q8WU20 508 aa11.46□□□□□ -0.57
CCDC18-208ENST00000479653 BTN2A2Q8WVV5 523 aa11.46□□□□□ -0.57
CCDC18-208ENST00000479653 CLIC6Q96NY7 704 aa11.46□□□□□ -0.57
CCDC18-208ENST00000479653 CPEB1Q9BZB8 566 aaKnown RBP11.46□□□□□ -0.57
CCDC18-208ENST00000479653 CYP3A43Q9HB55 503 aa11.46□□□□□ -0.57
CCDC18-208ENST00000479653 ZFR2Q9UPR6 939 aaKnown RBP11.46□□□□□ -0.57
CCDC18-208ENST00000479653 HS3ST3A1Q9Y663 406 aa11.46□□□□□ -0.57
CCDC18-208ENST00000479653 ZFC3H1O60293 1989 aaKnown RBP11.46□□□□□ -0.58
CCDC18-208ENST00000479653 SETD2Q9BYW2 2564 aaPredicted RBP11.46□□□□□ -0.58
CCDC18-208ENST00000479653 CRYBG3Q68DQ2 2970 aa11.45□□□□□ -0.58
CCDC18-208ENST00000479653 D6RAR5 112 aa11.45□□□□□ -0.58
CCDC18-208ENST00000479653 TULP2O00295 520 aa11.45□□□□□ -0.58
CCDC18-208ENST00000479653 KPNA3O00505 521 aaPredicted RBP11.45□□□□□ -0.58
CCDC18-208ENST00000479653 MCF2LO15068 1137 aa11.45□□□□□ -0.58
CCDC18-208ENST00000479653 YY2O15391 372 aa11.45□□□□□ -0.58
CCDC18-208ENST00000479653 MBD3O95983 291 aa11.45□□□□□ -0.58
CCDC18-208ENST00000479653 HLA-DRAP01903 254 aa11.45□□□□□ -0.58
CCDC18-208ENST00000479653 GNLYP22749 145 aa11.45□□□□□ -0.58
CCDC18-208ENST00000479653 ETV5P41161 510 aa11.45□□□□□ -0.58
CCDC18-208ENST00000479653 RABIFP47224 123 aa11.45□□□□□ -0.58
CCDC18-208ENST00000479653 ME1P48163 572 aa11.45□□□□□ -0.58
CCDC18-208ENST00000479653 OXCT1P55809 520 aa11.45□□□□□ -0.58
CCDC18-208ENST00000479653 CLDN10P78369 228 aa11.45□□□□□ -0.58
CCDC18-208ENST00000479653 CEBPZQ03701 1054 aaKnown RBP11.45□□□□□ -0.58
CCDC18-208ENST00000479653 ZACNQ401N2 412 aa11.45□□□□□ -0.58
CCDC18-208ENST00000479653 MS4A13Q5J8X5 152 aa11.45□□□□□ -0.58
CCDC18-208ENST00000479653 TMEM164Q5U3C3 297 aa11.45□□□□□ -0.58
CCDC18-208ENST00000479653 SV2AQ7L0J3 742 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms