RNA–Protein interactions for RNA: ENST00000479555.1

CMSS1-204, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 4

Gene CMSS1, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-204ENST00000479555 TRIM21P19474 475 aaKnown RBP4.28□□□□□ -1.72
CMSS1-204ENST00000479555 TNFSF4P23510 183 aa4.28□□□□□ -1.72
CMSS1-204ENST00000479555 GJB2P29033 226 aa4.28□□□□□ -1.72
CMSS1-204ENST00000479555 PPIFP30405 207 aaKnown RBP4.28□□□□□ -1.72
CMSS1-204ENST00000479555 ALDH1B1P30837 517 aa4.28□□□□□ -1.72
CMSS1-204ENST00000479555 RANBP1P43487 201 aa4.28□□□□□ -1.72
CMSS1-204ENST00000479555 ZNF131P52739 623 aa4.28□□□□□ -1.72
CMSS1-204ENST00000479555 RBM5P52756 815 aaKnown RBP eCLIP4.28□□□□□ -1.72
CMSS1-204ENST00000479555 RPS16P62249 146 aaKnown RBP4.28□□□□□ -1.72
CMSS1-204ENST00000479555 BLMHQ13867 455 aa4.28□□□□□ -1.72
CMSS1-204ENST00000479555 INAQ16352 499 aa4.28□□□□□ -1.72
CMSS1-204ENST00000479555 CYP1B1Q16678 543 aa4.28□□□□□ -1.72
CMSS1-204ENST00000479555 CERKLQ49MI3 558 aaPredicted RBP4.28□□□□□ -1.72
CMSS1-204ENST00000479555 CCDC152Q4G0S7 254 aa4.28□□□□□ -1.72
CMSS1-204ENST00000479555 C3orf38Q5JPI3 329 aa4.28□□□□□ -1.72
CMSS1-204ENST00000479555 CFAP58Q5T655 872 aa4.28□□□□□ -1.72
CMSS1-204ENST00000479555 GKAP1Q5VSY0 366 aaPredicted RBP4.28□□□□□ -1.72
CMSS1-204ENST00000479555 IZUMO3Q5VZ72 239 aa4.28□□□□□ -1.72
CMSS1-204ENST00000479555 ZNF280DQ6N043 979 aa4.28□□□□□ -1.72
CMSS1-204ENST00000479555 KDM7AQ6ZMT4 941 aa4.28□□□□□ -1.72
CMSS1-204ENST00000479555 TOGARAM2Q6ZUX3 1019 aa4.28□□□□□ -1.72
CMSS1-204ENST00000479555 RNF44Q7L0R7 432 aa4.28□□□□□ -1.72
CMSS1-204ENST00000479555 BZW1Q7L1Q6 419 aaKnown RBP4.28□□□□□ -1.72
CMSS1-204ENST00000479555 MICU3Q86XE3 530 aa4.28□□□□□ -1.72
CMSS1-204ENST00000479555 ZNF280BQ86YH2 543 aa4.28□□□□□ -1.72
CMSS1-204ENST00000479555 EIF1ADQ8N9N8 165 aaKnown RBP4.28□□□□□ -1.72
CMSS1-204ENST00000479555 SMYD1Q8NB12 490 aa4.28□□□□□ -1.72
CMSS1-204ENST00000479555 ATP11CQ8NB49 1132 aa4.28□□□□□ -1.72
CMSS1-204ENST00000479555 ABHD11Q8NFV4 315 aa4.28□□□□□ -1.72
CMSS1-204ENST00000479555 C16orf52Q8NHV5 167 aa4.28□□□□□ -1.72
CMSS1-204ENST00000479555 NOC3LQ8WTT2 800 aaKnown RBP4.28□□□□□ -1.72
CMSS1-204ENST00000479555 NSMCE1Q8WV22 266 aa4.28□□□□□ -1.72
CMSS1-204ENST00000479555 IRGQQ8WZA9 623 aa4.28□□□□□ -1.72
CMSS1-204ENST00000479555 PMM1Q92871 262 aa4.28□□□□□ -1.72
CMSS1-204ENST00000479555 OPTNQ96CV9 577 aa4.28□□□□□ -1.72
CMSS1-204ENST00000479555 RRP36Q96EU6 259 aaKnown RBP4.28□□□□□ -1.72
CMSS1-204ENST00000479555 THOC1Q96FV9 657 aaKnown RBP4.28□□□□□ -1.72
CMSS1-204ENST00000479555 SNX22Q96L94 193 aa4.28□□□□□ -1.72
CMSS1-204ENST00000479555 RIPOR3Q96MK2 946 aa4.28□□□□□ -1.72
CMSS1-204ENST00000479555 RAB3IPQ96QF0 476 aaPredicted RBP4.28□□□□□ -1.72
CMSS1-204ENST00000479555 PANX2Q96RD6 677 aa4.28□□□□□ -1.72
CMSS1-204ENST00000479555 MMS19Q96T76 1030 aa4.28□□□□□ -1.72
CMSS1-204ENST00000479555 SH3GL2Q99962 352 aa4.28□□□□□ -1.72
CMSS1-204ENST00000479555 FAM118BQ9BPY3 351 aa4.28□□□□□ -1.72
CMSS1-204ENST00000479555 TSGA10Q9BZW7 698 aa4.28□□□□□ -1.72
CMSS1-204ENST00000479555 MS4A7Q9GZW8 240 aaPredicted RBP4.28□□□□□ -1.72
CMSS1-204ENST00000479555 NSRP1Q9H0G5 558 aaKnown RBP4.28□□□□□ -1.72
CMSS1-204ENST00000479555 FOXP1Q9H334 677 aaPredicted RBP4.28□□□□□ -1.72
CMSS1-204ENST00000479555 CNOT10Q9H9A5 744 aaKnown RBP4.28□□□□□ -1.72
CMSS1-204ENST00000479555 TMOD4Q9NZQ9 345 aa4.28□□□□□ -1.72
CMSS1-204ENST00000479555 NDUFA13Q9P0J0 144 aa4.28□□□□□ -1.72
CMSS1-204ENST00000479555 COL20A1Q9P218 1284 aa4.28□□□□□ -1.72
CMSS1-204ENST00000479555 HPCAL4Q9UM19 191 aa4.28□□□□□ -1.72
CMSS1-204ENST00000479555 RPL26L1Q9UNX3 145 aaKnown RBP4.28□□□□□ -1.72
CMSS1-204ENST00000479555 CYP46A1Q9Y6A2 500 aa4.28□□□□□ -1.72
CMSS1-204ENST00000479555 IQGAP1P46940 1657 aa4.28□□□□□ -1.72
CMSS1-204ENST00000479555 FNDC1Q4ZHG4 1894 aaPredicted RBP4.28□□□□□ -1.72
CMSS1-204ENST00000479555 NUP153P49790 1475 aaKnown RBP4.27□□□□□ -1.73
CMSS1-204ENST00000479555 VPS37CA5D8V6 355 aaPredicted RBP4.27□□□□□ -1.73
CMSS1-204ENST00000479555 PRR23D1E9PI22 279 aaPredicted RBP4.27□□□□□ -1.73
CMSS1-204ENST00000479555 APOL1O14791 398 aa4.27□□□□□ -1.73
CMSS1-204ENST00000479555 WDR46O15213 610 aaKnown RBP4.27□□□□□ -1.73
CMSS1-204ENST00000479555 CYTH3O43739 400 aa4.27□□□□□ -1.73
CMSS1-204ENST00000479555 PFKFB2O60825 505 aa4.27□□□□□ -1.73
CMSS1-204ENST00000479555 ATP5HO75947 161 aa4.27□□□□□ -1.73
CMSS1-204ENST00000479555 ALPLP05186 524 aa4.27□□□□□ -1.73
CMSS1-204ENST00000479555 PRR23D2P0DMB1 279 aaPredicted RBP4.27□□□□□ -1.73
CMSS1-204ENST00000479555 TNFRSF8P28908 595 aa4.27□□□□□ -1.73
CMSS1-204ENST00000479555 CASP14P31944 242 aa4.27□□□□□ -1.73
CMSS1-204ENST00000479555 CARSP49589 748 aaKnown RBP4.27□□□□□ -1.73
CMSS1-204ENST00000479555 SERPINB8P50452 374 aa4.27□□□□□ -1.73
CMSS1-204ENST00000479555 UBASH3AP57075 661 aa4.27□□□□□ -1.73
CMSS1-204ENST00000479555 NANOS2P60321 138 aaKnown RBP4.27□□□□□ -1.73
CMSS1-204ENST00000479555 E2F1Q01094 437 aa4.27□□□□□ -1.73
CMSS1-204ENST00000479555 BIRC3Q13489 604 aa4.27□□□□□ -1.73
CMSS1-204ENST00000479555 KRT32Q14532 448 aa4.27□□□□□ -1.73
CMSS1-204ENST00000479555 SLC29A2Q14542 456 aa4.27□□□□□ -1.73
CMSS1-204ENST00000479555 KCNB1Q14721 858 aa4.27□□□□□ -1.73
CMSS1-204ENST00000479555 ZIK1Q3SY52 487 aaPredicted RBP4.27□□□□□ -1.73
CMSS1-204ENST00000479555 FAM209BQ5JX69 171 aa4.27□□□□□ -1.73
CMSS1-204ENST00000479555 NAA16Q6N069 864 aaPredicted RBP4.27□□□□□ -1.73
CMSS1-204ENST00000479555 MAATS1Q7Z4T9 603 aa4.27□□□□□ -1.73
CMSS1-204ENST00000479555 MRPL10Q7Z7H8 261 aaKnown RBP4.27□□□□□ -1.73
CMSS1-204ENST00000479555 CD302Q8IX05 232 aa4.27□□□□□ -1.73
CMSS1-204ENST00000479555 IQCF2Q8IXL9 164 aa4.27□□□□□ -1.73
CMSS1-204ENST00000479555 CACNA2D3Q8IZS8 1091 aa4.27□□□□□ -1.73
CMSS1-204ENST00000479555 CNTROBQ8N137 903 aa4.27□□□□□ -1.73
CMSS1-204ENST00000479555 STKLD1Q8NE28 680 aa4.27□□□□□ -1.73
CMSS1-204ENST00000479555 RASSF8Q8NHQ8 419 aa4.27□□□□□ -1.73
CMSS1-204ENST00000479555 MAML1Q92585 1016 aa4.27□□□□□ -1.73
CMSS1-204ENST00000479555 ZBTB10Q96DT7 871 aa4.27□□□□□ -1.73
CMSS1-204ENST00000479555 RBM17Q96I25 401 aaKnown RBP4.27□□□□□ -1.73
CMSS1-204ENST00000479555 VCPIP1Q96JH7 1222 aa4.27□□□□□ -1.73
CMSS1-204ENST00000479555 FAM81BQ96LP2 452 aa4.27□□□□□ -1.73
CMSS1-204ENST00000479555 OLFM3Q96PB7 478 aa4.27□□□□□ -1.73
CMSS1-204ENST00000479555 PRAM1Q96QH2 718 aa4.27□□□□□ -1.73
CMSS1-204ENST00000479555 SNX18Q96RF0 628 aa4.27□□□□□ -1.73
CMSS1-204ENST00000479555 LLPHQ9BRT6 129 aaKnown RBP4.27□□□□□ -1.73
CMSS1-204ENST00000479555 SIL1Q9H173 461 aa4.27□□□□□ -1.73
CMSS1-204ENST00000479555 GOLPH3LQ9H4A5 285 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms