RNA–Protein interactions for RNA: ENST00000479335.5

RAD51B-208, Transcript of RAD51 paralog B, humanhuman

TSL 1 (best)

Gene RAD51B, Length 1,615 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD51B-208ENST00000479335 GRAMD1AQ96CP6 724 aa10.04□□□□□ -0.8
RAD51B-208ENST00000479335 HMCESQ96FZ2 354 aa10.04□□□□□ -0.8
RAD51B-208ENST00000479335 KIFC1Q9BW19 673 aa10.04□□□□□ -0.8
RAD51B-208ENST00000479335 KLF16Q9BXK1 252 aaPredicted RBP10.04□□□□□ -0.8
RAD51B-208ENST00000479335 FAM107BQ9H098 131 aa10.04□□□□□ -0.8
RAD51B-208ENST00000479335 ARNT2Q9HBZ2 717 aa10.04□□□□□ -0.8
RAD51B-208ENST00000479335 MRM3Q9HC36 420 aaKnown RBP10.04□□□□□ -0.8
RAD51B-208ENST00000479335 STOML2Q9UJZ1 356 aa10.04□□□□□ -0.8
RAD51B-208ENST00000479335 SOX13Q9UN79 622 aa10.04□□□□□ -0.8
RAD51B-208ENST00000479335 INSL5Q9Y5Q6 135 aa10.04□□□□□ -0.8
RAD51B-208ENST00000479335 RPS6KL1Q9Y6S9 549 aa10.04□□□□□ -0.8
RAD51B-208ENST00000479335 NYNRINQ9P2P1 1898 aaKnown RBP10.03□□□□□ -0.8
RAD51B-208ENST00000479335 TRIM49D1C9J1S8 452 aa10.03□□□□□ -0.8
RAD51B-208ENST00000479335 F5H423 210 aaPredicted RBP10.03□□□□□ -0.8
RAD51B-208ENST00000479335 TEX28O15482 410 aa10.03□□□□□ -0.8
RAD51B-208ENST00000479335 SPAG7O75391 227 aa10.03□□□□□ -0.8
RAD51B-208ENST00000479335 CLDN11O75508 207 aa10.03□□□□□ -0.8
RAD51B-208ENST00000479335 FGF18O76093 207 aa10.03□□□□□ -0.8
RAD51B-208ENST00000479335 C1RP00736 705 aa10.03□□□□□ -0.8
RAD51B-208ENST00000479335 F11P03951 625 aa10.03□□□□□ -0.8
RAD51B-208ENST00000479335 HLA-DQB2P05538 268 aa10.03□□□□□ -0.8
RAD51B-208ENST00000479335 VIMP08670 466 aaKnown RBP10.03□□□□□ -0.8
RAD51B-208ENST00000479335 PFKLP17858 780 aa10.03□□□□□ -0.8
RAD51B-208ENST00000479335 OR1E1P30953 314 aa10.03□□□□□ -0.8
RAD51B-208ENST00000479335 RPA3P35244 121 aaPredicted RBP10.03□□□□□ -0.8
RAD51B-208ENST00000479335 ADRA1AP35348 466 aa10.03□□□□□ -0.8
RAD51B-208ENST00000479335 LBX1P52954 281 aa10.03□□□□□ -0.8
RAD51B-208ENST00000479335 TWF1Q12792 350 aa10.03□□□□□ -0.8
RAD51B-208ENST00000479335 SEPT7Q16181 437 aaKnown RBP10.03□□□□□ -0.8
RAD51B-208ENST00000479335 ANKRD20A4Q4UJ75 823 aa10.03□□□□□ -0.8
RAD51B-208ENST00000479335 FAM133BQ5BKY9 247 aaKnown RBP10.03□□□□□ -0.8
RAD51B-208ENST00000479335 PCID2Q5JVF3 399 aa10.03□□□□□ -0.8
RAD51B-208ENST00000479335 ADGRF1Q5T601 910 aa10.03□□□□□ -0.8
RAD51B-208ENST00000479335 GRTP1Q5TC63 336 aa10.03□□□□□ -0.8
RAD51B-208ENST00000479335 HHATQ5VTY9 493 aa10.03□□□□□ -0.8
RAD51B-208ENST00000479335 RANBP10Q6VN20 620 aa10.03□□□□□ -0.8
RAD51B-208ENST00000479335 C16orf59Q7L2K0 433 aa10.03□□□□□ -0.8
RAD51B-208ENST00000479335 OTOP2Q7RTS6 562 aa10.03□□□□□ -0.8
RAD51B-208ENST00000479335 TFAP2DQ7Z6R9 452 aa10.03□□□□□ -0.8
RAD51B-208ENST00000479335 UBE2Q1Q7Z7E8 422 aa10.03□□□□□ -0.8
RAD51B-208ENST00000479335 HERC6Q8IVU3 1022 aa10.03□□□□□ -0.8
RAD51B-208ENST00000479335 LGI2Q8N0V4 545 aa10.03□□□□□ -0.8
RAD51B-208ENST00000479335 C4orf33Q8N1A6 199 aa10.03□□□□□ -0.8
RAD51B-208ENST00000479335 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.03□□□□□ -0.8
RAD51B-208ENST00000479335 PHOSPHO2Q8TCD6 241 aa10.03□□□□□ -0.8
RAD51B-208ENST00000479335 MGARPQ8TDB4 240 aa10.03□□□□□ -0.8
RAD51B-208ENST00000479335 ACMSDQ8TDX5 336 aa10.03□□□□□ -0.8
RAD51B-208ENST00000479335 USP33Q8TEY7 942 aa10.03□□□□□ -0.8
RAD51B-208ENST00000479335 IMP4Q96G21 291 aaKnown RBP10.03□□□□□ -0.8
RAD51B-208ENST00000479335 CERS2Q96G23 380 aa10.03□□□□□ -0.8
RAD51B-208ENST00000479335 APOPT1Q96IL0 206 aa10.03□□□□□ -0.8
RAD51B-208ENST00000479335 TBL1YQ9BQ87 522 aa10.03□□□□□ -0.8
RAD51B-208ENST00000479335 VPS11Q9H270 941 aa10.03□□□□□ -0.8
RAD51B-208ENST00000479335 SP110Q9HB58 689 aa10.03□□□□□ -0.8
RAD51B-208ENST00000479335 NSMCE4AQ9NXX6 385 aa10.03□□□□□ -0.8
RAD51B-208ENST00000479335 PRKAG2Q9UGJ0 569 aa10.03□□□□□ -0.8
RAD51B-208ENST00000479335 LZTS1Q9Y250 596 aa10.03□□□□□ -0.8
RAD51B-208ENST00000479335 IRAK3Q9Y616 596 aa10.03□□□□□ -0.8
RAD51B-208ENST00000479335 ATXN2Q99700 1313 aaKnown RBP10.03□□□□□ -0.8
RAD51B-208ENST00000479335 ZCWPW2A0A1B0GU75 182 aa10.02□□□□□ -0.81
RAD51B-208ENST00000479335 PRAMEF11O60813 436 aa10.02□□□□□ -0.81
RAD51B-208ENST00000479335 STC2O76061 302 aa10.02□□□□□ -0.81
RAD51B-208ENST00000479335 OLFM2O95897 454 aa10.02□□□□□ -0.81
RAD51B-208ENST00000479335 LINC00271P0C7V0 271 aa10.02□□□□□ -0.81
RAD51B-208ENST00000479335 ETFBP38117 255 aa10.02□□□□□ -0.81
RAD51B-208ENST00000479335 CCNFP41002 786 aa10.02□□□□□ -0.81
RAD51B-208ENST00000479335 CRADDP78560 199 aa10.02□□□□□ -0.81
RAD51B-208ENST00000479335 FPGSQ05932 587 aa10.02□□□□□ -0.81
RAD51B-208ENST00000479335 LRRC14Q15048 493 aa10.02□□□□□ -0.81
RAD51B-208ENST00000479335 SLC14A2Q15849 920 aa10.02□□□□□ -0.81
RAD51B-208ENST00000479335 PDK4Q16654 411 aa10.02□□□□□ -0.81
RAD51B-208ENST00000479335 STXBP5Q5T5C0 1151 aa10.02□□□□□ -0.81
RAD51B-208ENST00000479335 LILRA6Q6PI73 481 aa10.02□□□□□ -0.81
RAD51B-208ENST00000479335 CCDC149Q6ZUS6 474 aa10.02□□□□□ -0.81
RAD51B-208ENST00000479335 TMCO2Q7Z6W1 182 aaPredicted RBP10.02□□□□□ -0.81
RAD51B-208ENST00000479335 YTHDF3Q7Z739 585 aaKnown RBP10.02□□□□□ -0.81
RAD51B-208ENST00000479335 SETD3Q86TU7 594 aaPredicted RBP10.02□□□□□ -0.81
RAD51B-208ENST00000479335 TAX1BP1Q86VP1 789 aa10.02□□□□□ -0.81
RAD51B-208ENST00000479335 LRRC34Q8IZ02 419 aa10.02□□□□□ -0.81
RAD51B-208ENST00000479335 CACNA2D3Q8IZS8 1091 aa10.02□□□□□ -0.81
RAD51B-208ENST00000479335 SP7Q8TDD2 431 aaPredicted RBP10.02□□□□□ -0.81
RAD51B-208ENST00000479335 SEC16BQ96JE7 1060 aa10.02□□□□□ -0.81
RAD51B-208ENST00000479335 RAD9AQ99638 391 aa10.02□□□□□ -0.81
RAD51B-208ENST00000479335 CPNE1Q99829 537 aa10.02□□□□□ -0.81
RAD51B-208ENST00000479335 KIF9Q9HAQ2 790 aa10.02□□□□□ -0.81
RAD51B-208ENST00000479335 ZFATQ9P243 1243 aa10.02□□□□□ -0.81
RAD51B-208ENST00000479335 BRCA2P51587 3418 aa10.02□□□□□ -0.81
RAD51B-208ENST00000479335 PTPRSQ13332 1948 aa10.01□□□□□ -0.81
RAD51B-208ENST00000479335 ANAPC1Q9H1A4 1944 aa10.01□□□□□ -0.81
RAD51B-208ENST00000479335 CHD5Q8TDI0 1954 aa10.01□□□□□ -0.81
RAD51B-208ENST00000479335 KIAA0100Q14667 2235 aaKnown RBP10.01□□□□□ -0.81
RAD51B-208ENST00000479335 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.01□□□□□ -0.81
RAD51B-208ENST00000479335 GOLGA6L7A0A1B0GV03 622 aa10.01□□□□□ -0.81
RAD51B-208ENST00000479335 ILVBLA1L0T0 632 aa10.01□□□□□ -0.81
RAD51B-208ENST00000479335 TCP11X1B4DZS4 312 aa10.01□□□□□ -0.81
RAD51B-208ENST00000479335 J3KR12 359 aa10.01□□□□□ -0.81
RAD51B-208ENST00000479335 LPXNO60711 386 aa10.01□□□□□ -0.81
RAD51B-208ENST00000479335 USP12O75317 370 aa10.01□□□□□ -0.81
RAD51B-208ENST00000479335 RFPL1O75677 317 aa10.01□□□□□ -0.81
RAD51B-208ENST00000479335 PIAS1O75925 651 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms