RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 SBK3P0C264 359 aa11.01□□□□□ -0.65
VPS52-217ENST00000478934 OR4Q2P0C623 313 aa11.01□□□□□ -0.65
VPS52-217ENST00000478934 GNAT1P11488 350 aa11.01□□□□□ -0.65
VPS52-217ENST00000478934 MPP1Q00013 466 aa11.01□□□□□ -0.65
VPS52-217ENST00000478934 RAB41Q5JT25 222 aa11.01□□□□□ -0.65
VPS52-217ENST00000478934 PPM1LQ5SGD2 360 aa11.01□□□□□ -0.65
VPS52-217ENST00000478934 SDHAF4Q5VUM1 108 aa11.01□□□□□ -0.65
VPS52-217ENST00000478934 IRGCQ6NXR0 463 aa11.01□□□□□ -0.65
VPS52-217ENST00000478934 MFSD6LQ8IWD5 586 aa11.01□□□□□ -0.65
VPS52-217ENST00000478934 TRPV1Q8NER1 839 aa11.01□□□□□ -0.65
VPS52-217ENST00000478934 IPMKQ8NFU5 416 aa11.01□□□□□ -0.65
VPS52-217ENST00000478934 OR10T2Q8NGX3 314 aa11.01□□□□□ -0.65
VPS52-217ENST00000478934 VPS39Q96JC1 886 aa11.01□□□□□ -0.65
VPS52-217ENST00000478934 ANKRD27Q96NW4 1050 aa11.01□□□□□ -0.65
VPS52-217ENST00000478934 TUBGCP5Q96RT8 1024 aa11.01□□□□□ -0.65
VPS52-217ENST00000478934 OMDQ99983 421 aa11.01□□□□□ -0.65
VPS52-217ENST00000478934 FERMT1Q9BQL6 677 aa11.01□□□□□ -0.65
VPS52-217ENST00000478934 GATA5Q9BWX5 397 aaPredicted RBP11.01□□□□□ -0.65
VPS52-217ENST00000478934 PDCD11Q14690 1871 aaKnown RBP11.01□□□□□ -0.65
VPS52-217ENST00000478934 HSPA4LO95757 839 aa11□□□□□ -0.65
VPS52-217ENST00000478934 AOC1P19801 751 aa11□□□□□ -0.65
VPS52-217ENST00000478934 SPRP35270 261 aaPredicted RBP11□□□□□ -0.65
VPS52-217ENST00000478934 SERPINB5P36952 375 aa11□□□□□ -0.65
VPS52-217ENST00000478934 CHRNA4P43681 627 aa11□□□□□ -0.65
VPS52-217ENST00000478934 CPT1AP50416 773 aa11□□□□□ -0.65
VPS52-217ENST00000478934 GALNT2Q10471 571 aa11□□□□□ -0.65
VPS52-217ENST00000478934 CDC16Q13042 620 aa11□□□□□ -0.65
VPS52-217ENST00000478934 MPP3Q13368 585 aa11□□□□□ -0.65
VPS52-217ENST00000478934 C6orf163Q5TEZ5 329 aa11□□□□□ -0.65
VPS52-217ENST00000478934 SLC41A1Q8IVJ1 513 aa11□□□□□ -0.65
VPS52-217ENST00000478934 RNF148Q8N7C7 305 aa11□□□□□ -0.65
VPS52-217ENST00000478934 DQX1Q8TE96 717 aaKnown RBP11□□□□□ -0.65
VPS52-217ENST00000478934 PPP4R1Q8TF05 950 aa11□□□□□ -0.65
VPS52-217ENST00000478934 KCTD4Q8WVF5 259 aa11□□□□□ -0.65
VPS52-217ENST00000478934 NTAN1Q96AB6 310 aa11□□□□□ -0.65
VPS52-217ENST00000478934 SGF29Q96ES7 293 aa11□□□□□ -0.65
VPS52-217ENST00000478934 TEKT5Q96M29 485 aa11□□□□□ -0.65
VPS52-217ENST00000478934 TSC22D3Q99576 134 aa11□□□□□ -0.65
VPS52-217ENST00000478934 CNGB3Q9NQW8 809 aa11□□□□□ -0.65
VPS52-217ENST00000478934 SCOCQ9UIL1 159 aa11□□□□□ -0.65
VPS52-217ENST00000478934 ADAMTS6Q9UKP5 1117 aa11□□□□□ -0.65
VPS52-217ENST00000478934 TSC2P49815 1807 aa11□□□□□ -0.65
VPS52-217ENST00000478934 AURKAO14965 403 aa11□□□□□ -0.65
VPS52-217ENST00000478934 MOCS2O96007 188 aaPredicted RBP11□□□□□ -0.65
VPS52-217ENST00000478934 AHSGP02765 367 aa11□□□□□ -0.65
VPS52-217ENST00000478934 CTGFP29279 349 aa11□□□□□ -0.65
VPS52-217ENST00000478934 EPHA3P29320 983 aa11□□□□□ -0.65
VPS52-217ENST00000478934 HARS2P49590 506 aaKnown RBP11□□□□□ -0.65
VPS52-217ENST00000478934 CXCR3P49682 368 aa11□□□□□ -0.65
VPS52-217ENST00000478934 SERPINB8P50452 374 aa11□□□□□ -0.65
VPS52-217ENST00000478934 COPAP53621 1224 aa11□□□□□ -0.65
VPS52-217ENST00000478934 POLE2P56282 527 aa11□□□□□ -0.65
VPS52-217ENST00000478934 AP2B1P63010 937 aa11□□□□□ -0.65
VPS52-217ENST00000478934 MRPS6P82932 125 aaKnown RBP11□□□□□ -0.65
VPS52-217ENST00000478934 SCAPQ12770 1279 aa11□□□□□ -0.65
VPS52-217ENST00000478934 CCNIQ14094 377 aa11□□□□□ -0.65
VPS52-217ENST00000478934 PCBP1Q15365 356 aaKnown RBP eCLIP11□□□□□ -0.654e-9■■■□□ 16.2
VPS52-217ENST00000478934 TRMT5Q32P41 509 aaKnown RBP11□□□□□ -0.65
VPS52-217ENST00000478934 DNAL1Q4LDG9 190 aa11□□□□□ -0.65
VPS52-217ENST00000478934 GNASQ5JWF2 1037 aa11□□□□□ -0.65
VPS52-217ENST00000478934 STXBP5Q5T5C0 1151 aa11□□□□□ -0.65
VPS52-217ENST00000478934 TMEM198Q66K66 360 aa11□□□□□ -0.65
VPS52-217ENST00000478934 ESRP1Q6NXG1 681 aaKnown RBP11□□□□□ -0.65
VPS52-217ENST00000478934 TMEM151AQ8N4L1 468 aa11□□□□□ -0.65
VPS52-217ENST00000478934 OR6Y1Q8NGX8 325 aa11□□□□□ -0.65
VPS52-217ENST00000478934 ECSITQ9BQ95 431 aa11□□□□□ -0.65
VPS52-217ENST00000478934 NAT9Q9BTE0 207 aa11□□□□□ -0.65
VPS52-217ENST00000478934 TASP1Q9H6P5 420 aa11□□□□□ -0.65
VPS52-217ENST00000478934 MPP6Q9NZW5 540 aa11□□□□□ -0.65
VPS52-217ENST00000478934 ANGPTL2Q9UKU9 493 aa11□□□□□ -0.65
VPS52-217ENST00000478934 RNASEH1O60930 286 aaKnown RBP10.99□□□□□ -0.65
VPS52-217ENST00000478934 PMPCBO75439 489 aa10.99□□□□□ -0.65
VPS52-217ENST00000478934 VAPBO95292 243 aa10.99□□□□□ -0.65
VPS52-217ENST00000478934 PEX2P28328 305 aa10.99□□□□□ -0.65
VPS52-217ENST00000478934 CD52P31358 61 aa10.99□□□□□ -0.65
VPS52-217ENST00000478934 SERPINB6P35237 376 aa10.99□□□□□ -0.65
VPS52-217ENST00000478934 MAGEA12P43365 314 aa10.99□□□□□ -0.65
VPS52-217ENST00000478934 DSG1Q02413 1049 aa10.99□□□□□ -0.65
VPS52-217ENST00000478934 CACNB2Q08289 660 aaPredicted RBP10.99□□□□□ -0.65
VPS52-217ENST00000478934 ASPHQ12797 758 aa10.99□□□□□ -0.65
VPS52-217ENST00000478934 UPP1Q16831 310 aa10.99□□□□□ -0.65
VPS52-217ENST00000478934 ARL13BQ3SXY8 428 aa10.99□□□□□ -0.65
VPS52-217ENST00000478934 SFT2D3Q587I9 215 aa10.99□□□□□ -0.65
VPS52-217ENST00000478934 CFAP157Q5JU67 520 aa10.99□□□□□ -0.65
VPS52-217ENST00000478934 RPS27LQ71UM5 84 aaKnown RBP10.99□□□□□ -0.65
VPS52-217ENST00000478934 CLEC14AQ86T13 490 aa10.99□□□□□ -0.65
VPS52-217ENST00000478934 CEP97Q8IW35 865 aa10.99□□□□□ -0.65
VPS52-217ENST00000478934 DPF3Q92784 378 aa10.99□□□□□ -0.65
VPS52-217ENST00000478934 HDAC11Q96DB2 347 aa10.99□□□□□ -0.65
VPS52-217ENST00000478934 SLC9A7Q96T83 725 aa10.99□□□□□ -0.65
VPS52-217ENST00000478934 ZCWPW1Q9H0M4 648 aa10.99□□□□□ -0.65
VPS52-217ENST00000478934 NMRAL1Q9HBL8 299 aa10.99□□□□□ -0.65
VPS52-217ENST00000478934 NEU3Q9UQ49 428 aa10.99□□□□□ -0.65
VPS52-217ENST00000478934 SF3B1O75533 1304 aaKnown RBP eCLIP10.99□□□□□ -0.656e-6■■■■■ 31.6
VPS52-217ENST00000478934 TMEM233B4DJY2 109 aa10.99□□□□□ -0.65
VPS52-217ENST00000478934 AIM2O14862 343 aa10.99□□□□□ -0.65
VPS52-217ENST00000478934 FBXO21O94952 628 aa10.99□□□□□ -0.65
VPS52-217ENST00000478934 MX2P20592 715 aa10.99□□□□□ -0.65
VPS52-217ENST00000478934 ITGAXP20702 1163 aa10.99□□□□□ -0.65
VPS52-217ENST00000478934 LHX1P48742 406 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms